| Literature DB >> 21581863 |
Hoong-Kun Fun, Reza Kia, Hadi Kargar.
Abstract
In the title compound, C(14)H(12)N(4)O(5), an intra-molecular N-H⋯O hydrogen bond generates an S(6) ring motif. The dihedral angle between the two benzene rings is 3.91 (3)°, which shows the mol-ecule is almost planar. The para-nitro group is twisted from the benzene ring to which it is attached, making a dihedral angle of 8.50 (9)°. In the crystal structure, mol-ecules are linked together by inter-molecular C-H⋯O and inter-molecular three-centred O⋯O [2.8646 (12)-2.9213 (11) Å] and O⋯N [3.0518 (11) Å] inter-actions. The crystal structure is further stabilized by inter-molecular π-π inter-actions [centroid-to-centroid distances 3.5708 (6)-3.9728 (12) Å].Entities:
Year: 2009 PMID: 21581863 PMCID: PMC2968177 DOI: 10.1107/S1600536809000038
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H12N4O5 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6651 reflections | |
| θ = 2.9–40.3° | |
| µ = 0.12 mm−1 | |
| α = 98.048 (1)° | |
| β = 97.064 (1)° | Block, orange |
| γ = 109.467 (1)° | 0.57 × 0.23 × 0.10 mm |
| Bruker SMART APEXII CCD area-detector diffractometer | 5023 independent reflections |
| Radiation source: fine-focus sealed tube | 4442 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.5°, θmin = 1.5° |
| Absorption correction: multi-scan ( | |
| 14423 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 5023 reflections | (Δ/σ)max < 0.001 |
| 213 parameters | Δρmax = 0.52 e Å−3 |
| 0 restraints | Δρmin = −0.24 e Å−3 |
| Experimental. The low-temperature data was collected with the Oxford Cyrosystem Cobra low-temperature attachment. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| O1 | 0.52355 (11) | 0.19077 (9) | 0.30740 (5) | 0.01789 (14) | |
| O2 | 0.31793 (12) | 0.47602 (10) | −0.06604 (5) | 0.02132 (15) | |
| O3 | 0.20422 (12) | 0.51054 (10) | −0.20851 (5) | 0.02350 (16) | |
| O4 | −0.18137 (11) | −0.00408 (11) | −0.45869 (5) | 0.02104 (15) | |
| O5 | −0.19171 (12) | −0.28928 (10) | −0.44929 (5) | 0.02410 (16) | |
| N1 | 0.27092 (11) | 0.00256 (11) | 0.02604 (5) | 0.01410 (14) | |
| N2 | 0.26656 (12) | 0.13732 (11) | −0.02830 (5) | 0.01416 (14) | |
| N3 | 0.22761 (12) | 0.40930 (10) | −0.15138 (6) | 0.01487 (15) | |
| N4 | −0.14093 (12) | −0.11921 (11) | −0.41450 (5) | 0.01611 (15) | |
| C1 | 0.46732 (13) | 0.00043 (12) | 0.27560 (6) | 0.01377 (15) | |
| C2 | 0.48758 (14) | −0.12628 (13) | 0.33510 (6) | 0.01710 (17) | |
| H2A | 0.5476 | −0.0815 | 0.4001 | 0.021* | |
| C3 | 0.41767 (15) | −0.31935 (14) | 0.29676 (7) | 0.01947 (18) | |
| H3A | 0.4306 | −0.4035 | 0.3365 | 0.023* | |
| C4 | 0.32856 (14) | −0.38821 (13) | 0.19954 (7) | 0.01804 (17) | |
| H4A | 0.2814 | −0.5177 | 0.1745 | 0.022* | |
| C5 | 0.31052 (13) | −0.26234 (12) | 0.14015 (6) | 0.01530 (16) | |
| H5A | 0.2514 | −0.3085 | 0.0751 | 0.018* | |
| C6 | 0.38009 (12) | −0.06701 (12) | 0.17671 (6) | 0.01284 (15) | |
| C7 | 0.36703 (13) | 0.06671 (12) | 0.11394 (6) | 0.01371 (15) | |
| H7A | 0.4276 | 0.1967 | 0.1373 | 0.016* | |
| C8 | 0.17242 (12) | 0.07996 (12) | −0.12228 (6) | 0.01178 (15) | |
| C9 | 0.09189 (13) | −0.11672 (12) | −0.16426 (6) | 0.01378 (15) | |
| H9A | 0.1056 | −0.2038 | −0.1266 | 0.017* | |
| C10 | −0.00529 (13) | −0.18102 (12) | −0.25882 (6) | 0.01405 (15) | |
| H10A | −0.0547 | −0.3101 | −0.2852 | 0.017* | |
| C11 | −0.02975 (12) | −0.05112 (12) | −0.31553 (6) | 0.01291 (15) | |
| C12 | 0.04681 (12) | 0.14065 (12) | −0.27956 (6) | 0.01311 (15) | |
| H12A | 0.0307 | 0.2253 | −0.3184 | 0.016* | |
| C13 | 0.14893 (12) | 0.20609 (11) | −0.18400 (6) | 0.01222 (15) | |
| C14 | 0.64623 (15) | 0.27271 (14) | 0.40200 (7) | 0.01993 (18) | |
| H14A | 0.6876 | 0.4084 | 0.4120 | 0.030* | |
| H14B | 0.7657 | 0.2377 | 0.4074 | 0.030* | |
| H14C | 0.5675 | 0.2269 | 0.4500 | 0.030* | |
| H1N2 | 0.329 (2) | 0.256 (2) | −0.0027 (11) | 0.035 (4)* |
| O1 | 0.0227 (3) | 0.0151 (3) | 0.0117 (3) | 0.0049 (2) | −0.0022 (2) | −0.0014 (2) |
| O2 | 0.0294 (4) | 0.0137 (3) | 0.0151 (3) | 0.0053 (3) | −0.0036 (3) | −0.0028 (2) |
| O3 | 0.0317 (4) | 0.0130 (3) | 0.0239 (4) | 0.0077 (3) | −0.0032 (3) | 0.0055 (3) |
| O4 | 0.0218 (3) | 0.0268 (4) | 0.0147 (3) | 0.0103 (3) | −0.0016 (2) | 0.0048 (3) |
| O5 | 0.0274 (4) | 0.0189 (3) | 0.0185 (3) | 0.0055 (3) | −0.0040 (3) | −0.0063 (3) |
| N1 | 0.0153 (3) | 0.0149 (3) | 0.0115 (3) | 0.0049 (2) | 0.0015 (2) | 0.0030 (2) |
| N2 | 0.0173 (3) | 0.0123 (3) | 0.0109 (3) | 0.0042 (3) | −0.0004 (2) | 0.0014 (2) |
| N3 | 0.0162 (3) | 0.0115 (3) | 0.0158 (3) | 0.0051 (2) | 0.0007 (3) | 0.0007 (2) |
| N4 | 0.0144 (3) | 0.0190 (3) | 0.0126 (3) | 0.0052 (3) | −0.0001 (2) | −0.0002 (3) |
| C1 | 0.0130 (3) | 0.0156 (4) | 0.0116 (3) | 0.0044 (3) | 0.0017 (3) | 0.0018 (3) |
| C2 | 0.0164 (4) | 0.0212 (4) | 0.0130 (4) | 0.0057 (3) | 0.0011 (3) | 0.0049 (3) |
| C3 | 0.0199 (4) | 0.0207 (4) | 0.0195 (4) | 0.0072 (3) | 0.0041 (3) | 0.0091 (3) |
| C4 | 0.0191 (4) | 0.0142 (4) | 0.0199 (4) | 0.0042 (3) | 0.0047 (3) | 0.0040 (3) |
| C5 | 0.0151 (3) | 0.0150 (4) | 0.0136 (4) | 0.0032 (3) | 0.0024 (3) | 0.0014 (3) |
| C6 | 0.0123 (3) | 0.0145 (3) | 0.0108 (3) | 0.0040 (3) | 0.0017 (3) | 0.0018 (3) |
| C7 | 0.0145 (3) | 0.0138 (3) | 0.0118 (3) | 0.0042 (3) | 0.0019 (3) | 0.0016 (3) |
| C8 | 0.0120 (3) | 0.0124 (3) | 0.0103 (3) | 0.0042 (3) | 0.0013 (3) | 0.0010 (3) |
| C9 | 0.0160 (3) | 0.0113 (3) | 0.0128 (4) | 0.0039 (3) | 0.0015 (3) | 0.0020 (3) |
| C10 | 0.0151 (3) | 0.0111 (3) | 0.0136 (4) | 0.0030 (3) | 0.0014 (3) | 0.0001 (3) |
| C11 | 0.0119 (3) | 0.0144 (3) | 0.0103 (3) | 0.0034 (3) | 0.0000 (3) | 0.0007 (3) |
| C12 | 0.0128 (3) | 0.0139 (3) | 0.0124 (3) | 0.0051 (3) | 0.0008 (3) | 0.0022 (3) |
| C13 | 0.0128 (3) | 0.0100 (3) | 0.0129 (3) | 0.0039 (3) | 0.0007 (3) | 0.0007 (3) |
| C14 | 0.0188 (4) | 0.0225 (4) | 0.0131 (4) | 0.0048 (3) | −0.0019 (3) | −0.0032 (3) |
| O1—C1 | 1.3618 (11) | C4—C5 | 1.3883 (13) |
| O1—C14 | 1.4344 (11) | C4—H4A | 0.9300 |
| O2—N3 | 1.2456 (10) | C5—C6 | 1.4001 (12) |
| O3—N3 | 1.2274 (10) | C5—H5A | 0.9300 |
| O4—N4 | 1.2329 (10) | C6—C7 | 1.4617 (12) |
| O5—N4 | 1.2328 (10) | C7—H7A | 0.9300 |
| N1—C7 | 1.2858 (11) | C8—C9 | 1.4224 (11) |
| N1—N2 | 1.3736 (10) | C8—C13 | 1.4227 (11) |
| N2—C8 | 1.3545 (10) | C9—C10 | 1.3692 (11) |
| N2—H1N2 | 0.864 (16) | C9—H9A | 0.9300 |
| N3—C13 | 1.4435 (11) | C10—C11 | 1.3998 (12) |
| N4—C11 | 1.4520 (11) | C10—H10A | 0.9300 |
| C1—C2 | 1.3985 (12) | C11—C12 | 1.3730 (12) |
| C1—C6 | 1.4092 (11) | C12—C13 | 1.3912 (11) |
| C2—C3 | 1.3894 (14) | C12—H12A | 0.9300 |
| C2—H2A | 0.9300 | C14—H14A | 0.9600 |
| C3—C4 | 1.3916 (13) | C14—H14B | 0.9600 |
| C3—H3A | 0.9300 | C14—H14C | 0.9600 |
| C1—O1—C14 | 118.36 (7) | C1—C6—C7 | 119.95 (7) |
| C7—N1—N2 | 115.65 (7) | N1—C7—C6 | 119.25 (8) |
| C8—N2—N1 | 118.87 (7) | N1—C7—H7A | 120.4 |
| C8—N2—H1N2 | 121.6 (10) | C6—C7—H7A | 120.4 |
| N1—N2—H1N2 | 119.4 (10) | N2—C8—C9 | 119.67 (7) |
| O3—N3—O2 | 122.20 (7) | N2—C8—C13 | 123.82 (7) |
| O3—N3—C13 | 119.09 (7) | C9—C8—C13 | 116.51 (7) |
| O2—N3—C13 | 118.71 (7) | C10—C9—C8 | 121.61 (8) |
| O5—N4—O4 | 123.66 (8) | C10—C9—H9A | 119.2 |
| O5—N4—C11 | 118.19 (7) | C8—C9—H9A | 119.2 |
| O4—N4—C11 | 118.15 (7) | C9—C10—C11 | 119.52 (8) |
| O1—C1—C2 | 123.98 (8) | C9—C10—H10A | 120.2 |
| O1—C1—C6 | 115.86 (7) | C11—C10—H10A | 120.2 |
| C2—C1—C6 | 120.14 (8) | C12—C11—C10 | 121.62 (8) |
| C3—C2—C1 | 119.74 (8) | C12—C11—N4 | 118.64 (7) |
| C3—C2—H2A | 120.1 | C10—C11—N4 | 119.74 (7) |
| C1—C2—H2A | 120.1 | C11—C12—C13 | 118.80 (8) |
| C2—C3—C4 | 120.73 (8) | C11—C12—H12A | 120.6 |
| C2—C3—H3A | 119.6 | C13—C12—H12A | 120.6 |
| C4—C3—H3A | 119.6 | C12—C13—C8 | 121.90 (7) |
| C5—C4—C3 | 119.58 (8) | C12—C13—N3 | 115.84 (7) |
| C5—C4—H4A | 120.2 | C8—C13—N3 | 122.26 (7) |
| C3—C4—H4A | 120.2 | O1—C14—H14A | 109.5 |
| C4—C5—C6 | 120.96 (8) | O1—C14—H14B | 109.5 |
| C4—C5—H5A | 119.5 | H14A—C14—H14B | 109.5 |
| C6—C5—H5A | 119.5 | O1—C14—H14C | 109.5 |
| C5—C6—C1 | 118.84 (8) | H14A—C14—H14C | 109.5 |
| C5—C6—C7 | 121.21 (7) | H14B—C14—H14C | 109.5 |
| C7—N1—N2—C8 | 178.35 (7) | C13—C8—C9—C10 | −0.77 (12) |
| C14—O1—C1—C2 | 12.61 (13) | C8—C9—C10—C11 | −1.15 (13) |
| C14—O1—C1—C6 | −168.81 (8) | C9—C10—C11—C12 | 1.96 (13) |
| O1—C1—C2—C3 | 177.25 (8) | C9—C10—C11—N4 | −177.18 (8) |
| C6—C1—C2—C3 | −1.27 (13) | O5—N4—C11—C12 | 173.05 (8) |
| C1—C2—C3—C4 | 0.36 (14) | O4—N4—C11—C12 | −7.77 (12) |
| C2—C3—C4—C5 | 0.38 (14) | O5—N4—C11—C10 | −7.78 (12) |
| C3—C4—C5—C6 | −0.21 (14) | O4—N4—C11—C10 | 171.39 (8) |
| C4—C5—C6—C1 | −0.69 (13) | C10—C11—C12—C13 | −0.75 (13) |
| C4—C5—C6—C7 | 178.17 (8) | N4—C11—C12—C13 | 178.40 (7) |
| O1—C1—C6—C5 | −177.21 (7) | C11—C12—C13—C8 | −1.28 (13) |
| C2—C1—C6—C5 | 1.43 (13) | C11—C12—C13—N3 | 179.24 (7) |
| O1—C1—C6—C7 | 3.91 (12) | N2—C8—C13—C12 | −178.46 (8) |
| C2—C1—C6—C7 | −177.45 (8) | C9—C8—C13—C12 | 2.01 (12) |
| N2—N1—C7—C6 | −179.67 (7) | N2—C8—C13—N3 | 0.98 (13) |
| C5—C6—C7—N1 | 7.29 (13) | C9—C8—C13—N3 | −178.55 (7) |
| C1—C6—C7—N1 | −173.86 (8) | O3—N3—C13—C12 | −1.30 (12) |
| N1—N2—C8—C9 | −3.93 (12) | O2—N3—C13—C12 | 178.99 (8) |
| N1—N2—C8—C13 | 176.55 (8) | O3—N3—C13—C8 | 179.23 (8) |
| N2—C8—C9—C10 | 179.68 (8) | O2—N3—C13—C8 | −0.48 (12) |
| H··· | ||||
| N2—H1N2···O2 | 0.864 (15) | 2.029 (15) | 2.6253 (11) | 125.4 (13) |
| N2—H1N2···O2i | 0.864 (15) | 2.599 (15) | 3.3475 (11) | 145.6 (13) |
| C2—H2A···O4ii | 0.93 | 2.44 | 3.3113 (12) | 155 |
| C5—H5A···O2iii | 0.93 | 2.60 | 3.3184 (11) | 135 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H1N2⋯O2 | 0.864 (15) | 2.029 (15) | 2.6253 (11) | 125.4 (13) |
| N2—H1N2⋯O2i | 0.864 (15) | 2.599 (15) | 3.3475 (11) | 145.6 (13) |
| C2—H2 | 0.93 | 2.44 | 3.3113 (12) | 155 |
| C5—H5 | 0.93 | 2.60 | 3.3184 (11) | 135 |
Symmetry codes: (i) ; (ii) ; (iii) .