Literature DB >> 21581679

(Z)-Methyl 4-(1,3-benzothia-zol-2-yl-sulfan-yl)-2-(methoxy-imino)-3-oxo-butanoate.

Qian-Zhu Li, Bao-An Song, Song Yang, Yu-Guo Zheng, Qing-Qing Guo.   

Abstract

In the mol-ecular structure of the title compound, C(13)H(12)N(2)O(4)S(2), there is a dihedral angle of 0.41 (13)° between the benzene and thia-zole rings. In the crystal, inversion dimers linked by two C-H⋯O inter-actions together with π-π stacking between the parallel benzene rings of adjacent mol-ecules [centroid-centroid distance = 3.673 (2) Å].

Entities:  

Year:  2008        PMID: 21581679      PMCID: PMC2967954          DOI: 10.1107/S1600536808040658

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to benzothia­zole derivatives and their biological activities, see: Bradshaw et al. (2008 ▶); Moharram (1990 ▶); Spillane et al. (2007 ▶).

Experimental

Crystal data

C13H12N2O4S2 M = 324.39 Triclinic, a = 8.019 (3) Å b = 10.037 (4) Å c = 10.662 (5) Å α = 76.44 (2)° β = 67.997 (14)° γ = 74.964 (15)° V = 759.3 (6) Å3 Z = 2 Mo Kα radiation μ = 0.37 mm−1 T = 293 (2) K 0.22 × 0.19 × 0.18 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶) T min = 0.913, T max = 0.939 7739 measured reflections 2620 independent reflections 2278 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.101 S = 1.10 2620 reflections 190 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.27 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808040658/at2688sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808040658/at2688Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H12N2O4S2Z = 2
Mr = 324.39F(000) = 336
Triclinic, P1Dx = 1.419 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 8.019 (3) ÅCell parameters from 2679 reflections
b = 10.037 (4) Åθ = 2.1–25.0°
c = 10.662 (5) ŵ = 0.37 mm1
α = 76.44 (2)°T = 293 K
β = 67.997 (14)°Block, colourless
γ = 74.964 (15)°0.22 × 0.19 × 0.18 mm
V = 759.3 (6) Å3
Bruker SMART CCD area-detector diffractometer2620 independent reflections
Radiation source: fine-focus sealed tube2278 reflections with I > 2σ(I)
graphiteRint = 0.020
φ and ω scansθmax = 25.0°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2002)h = −9→9
Tmin = 0.913, Tmax = 0.939k = −11→11
7739 measured reflectionsl = −12→12
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.101H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0551P)2 + 0.1857P] where P = (Fo2 + 2Fc2)/3
2620 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.2301 (4)0.0381 (3)0.4741 (3)0.0665 (7)
H10.12060.02980.54550.080*
C20.3264 (5)−0.0698 (2)0.3972 (3)0.0788 (9)
H20.2803−0.15140.41850.095*
C30.4890 (4)−0.0581 (3)0.2898 (3)0.0735 (8)
H30.5497−0.13200.24070.088*
C40.5617 (4)0.0593 (3)0.2549 (3)0.0635 (6)
H40.67070.06700.18290.076*
C50.4664 (3)0.1679 (2)0.3314 (2)0.0472 (5)
C60.3029 (3)0.1583 (2)0.4407 (2)0.0452 (5)
C70.3251 (3)0.3681 (2)0.45184 (18)0.0387 (4)
C80.0771 (3)0.5086 (2)0.65173 (19)0.0436 (5)
H8A0.01380.59880.67980.052*
H8B−0.00680.47060.63020.052*
C90.1277 (3)0.41269 (19)0.76915 (19)0.0399 (4)
C10−0.0218 (3)0.3515 (2)0.88308 (19)0.0403 (4)
C110.0216 (3)0.2738 (2)1.0097 (2)0.0443 (5)
C12−0.4696 (3)0.3219 (3)0.9528 (3)0.0694 (7)
H12A−0.55520.27651.03030.104*
H12B−0.44540.28090.87340.104*
H12C−0.52040.41950.93690.104*
C130.1207 (5)0.0538 (3)1.1217 (3)0.0890 (9)
H13A0.1554−0.04241.10900.134*
H13B0.01740.06461.20400.134*
H13C0.22150.08281.12870.134*
N10.2241 (2)0.27441 (17)0.50850 (16)0.0448 (4)
N2−0.1769 (2)0.36936 (18)0.86710 (16)0.0451 (4)
O10.28034 (19)0.38332 (16)0.77643 (15)0.0530 (4)
O20.0143 (3)0.32938 (19)1.09837 (17)0.0774 (5)
O30.0721 (2)0.13890 (16)1.00578 (16)0.0638 (4)
O4−0.30078 (19)0.30477 (17)0.97942 (15)0.0568 (4)
S10.52463 (7)0.32799 (6)0.31355 (5)0.05263 (18)
S20.27235 (7)0.53273 (5)0.50010 (5)0.04578 (17)
U11U22U33U12U13U23
C10.0938 (19)0.0544 (14)0.0641 (14)−0.0322 (13)−0.0349 (13)0.0011 (11)
C20.138 (3)0.0375 (13)0.093 (2)−0.0260 (15)−0.074 (2)0.0004 (13)
C30.103 (2)0.0500 (14)0.0869 (19)0.0087 (14)−0.0594 (18)−0.0267 (13)
C40.0734 (16)0.0570 (14)0.0702 (15)0.0041 (12)−0.0340 (13)−0.0302 (12)
C50.0562 (12)0.0444 (11)0.0480 (11)−0.0042 (9)−0.0252 (10)−0.0131 (9)
C60.0596 (12)0.0385 (11)0.0474 (11)−0.0108 (9)−0.0292 (10)−0.0048 (8)
C70.0414 (10)0.0418 (10)0.0358 (9)−0.0071 (8)−0.0154 (8)−0.0082 (8)
C80.0432 (11)0.0490 (11)0.0406 (10)0.0008 (9)−0.0174 (8)−0.0155 (8)
C90.0420 (11)0.0403 (10)0.0438 (10)0.0002 (8)−0.0203 (8)−0.0174 (8)
C100.0438 (10)0.0413 (10)0.0424 (10)−0.0005 (8)−0.0213 (8)−0.0155 (8)
C110.0440 (11)0.0488 (12)0.0439 (10)−0.0041 (9)−0.0188 (9)−0.0127 (9)
C120.0513 (13)0.0842 (18)0.0843 (17)−0.0193 (12)−0.0342 (13)−0.0082 (14)
C130.127 (3)0.0679 (18)0.0844 (19)−0.0117 (17)−0.068 (2)0.0130 (15)
N10.0484 (9)0.0457 (10)0.0433 (9)−0.0136 (8)−0.0150 (7)−0.0077 (7)
N20.0446 (9)0.0497 (10)0.0449 (9)−0.0089 (7)−0.0185 (7)−0.0088 (7)
O10.0438 (8)0.0620 (9)0.0594 (9)−0.0054 (7)−0.0272 (7)−0.0094 (7)
O20.1180 (15)0.0696 (11)0.0605 (10)0.0034 (10)−0.0516 (10)−0.0270 (9)
O30.0931 (12)0.0467 (9)0.0642 (10)−0.0046 (8)−0.0473 (9)−0.0069 (7)
O40.0463 (8)0.0745 (11)0.0546 (9)−0.0184 (7)−0.0238 (7)0.0000 (7)
S10.0523 (3)0.0552 (4)0.0485 (3)−0.0167 (3)−0.0037 (2)−0.0193 (2)
S20.0515 (3)0.0413 (3)0.0472 (3)−0.0109 (2)−0.0144 (2)−0.0131 (2)
C1—C61.389 (3)C8—H8A0.9700
C1—C21.397 (4)C8—H8B0.9700
C1—H10.9300C9—O11.210 (2)
C2—C31.387 (4)C9—C101.493 (3)
C2—H20.9300C10—N21.279 (2)
C3—C41.362 (4)C10—C111.506 (3)
C3—H30.9300C11—O21.182 (2)
C4—C51.398 (3)C11—O31.315 (3)
C4—H40.9300C12—O41.445 (3)
C5—C61.398 (3)C12—H12A0.9600
C5—S11.736 (2)C12—H12B0.9600
C6—N11.397 (3)C12—H12C0.9600
C7—N11.291 (2)C13—O31.450 (3)
C7—S21.745 (2)C13—H13A0.9600
C7—S11.753 (2)C13—H13B0.9600
C8—C91.507 (3)C13—H13C0.9600
C8—S21.800 (2)N2—O41.386 (2)
C6—C1—C2118.0 (3)O1—C9—C10118.71 (17)
C6—C1—H1121.0O1—C9—C8124.10 (19)
C2—C1—H1121.0C10—C9—C8117.19 (16)
C3—C2—C1121.5 (2)N2—C10—C9118.18 (17)
C3—C2—H2119.3N2—C10—C11124.72 (18)
C1—C2—H2119.3C9—C10—C11117.11 (16)
C4—C3—C2121.3 (2)O2—C11—O3125.40 (19)
C4—C3—H3119.3O2—C11—C10123.41 (19)
C2—C3—H3119.3O3—C11—C10111.17 (16)
C3—C4—C5117.6 (3)O4—C12—H12A109.5
C3—C4—H4121.2O4—C12—H12B109.5
C5—C4—H4121.2H12A—C12—H12B109.5
C6—C5—C4122.2 (2)O4—C12—H12C109.5
C6—C5—S1109.43 (15)H12A—C12—H12C109.5
C4—C5—S1128.4 (2)H12B—C12—H12C109.5
C1—C6—N1124.8 (2)O3—C13—H13A109.5
C1—C6—C5119.4 (2)O3—C13—H13B109.5
N1—C6—C5115.76 (18)H13A—C13—H13B109.5
N1—C7—S2124.48 (15)O3—C13—H13C109.5
N1—C7—S1117.24 (15)H13A—C13—H13C109.5
S2—C7—S1118.25 (11)H13B—C13—H13C109.5
C9—C8—S2113.07 (14)C7—N1—C6109.26 (17)
C9—C8—H8A109.0C10—N2—O4111.87 (15)
S2—C8—H8A109.0C11—O3—C13115.94 (19)
C9—C8—H8B109.0N2—O4—C12109.46 (16)
S2—C8—H8B109.0C5—S1—C788.31 (10)
H8A—C8—H8B107.8C7—S2—C898.95 (10)
D—H···AD—HH···AD···AD—H···A
C3—H3···O1i0.932.553.398 (3)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C3—H3⋯O1i0.932.553.398 (3)152

Symmetry code: (i) .

  3 in total

1.  Mechanisms of acquired resistance to 2-(4-Amino-3-methylphenyl)benzothiazole in breast cancer cell lines.

Authors:  Tracey D Bradshaw; Erica L Stone; Valentina Trapani; Chee-Onn Leong; Charles S Matthews; Robert te Poele; Malcolm F G Stevens
Journal:  Breast Cancer Res Treat       Date:  2007-08-03       Impact factor: 4.872

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Benzothiazole bipyridine complexes of ruthenium(II) with cytotoxic activity.

Authors:  Caitriona B Spillane; Nicholas C Fletcher; Sandra M Rountree; Hendrik van den Berg; Severine Chanduloy; Joy L Morgan; F Richard Keene
Journal:  J Biol Inorg Chem       Date:  2007-05-26       Impact factor: 3.358

  3 in total
  1 in total

1.  6-Bromo-2-methyl-sulfanyl-1,3-benzo-thia-zole.

Authors:  Michał A Dobrowolski; Marta Struga; Daniel Szulczyk
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-11-25
  1 in total

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