Literature DB >> 21581673

Isopropyl 2-(5-chloro-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(14)H(15)ClO(4)S, the S atom has a distorted trigonal-pyramidal coordination. The O atom and the methyl group of the methylsulfinyl substituent lie on opposite sides of the benzofuran ring system. The crystal structure is stabilized by intermolecular aromatic π-π interactions between the benzene rings of neighbouring molecules [centroid-centroid distance = 4.057 (3) Å], and by C-H⋯π interactions between a methyl H atom and the benzene ring of an adjacent molecule.

Entities:  

Year:  2008        PMID: 21581673      PMCID: PMC2967855          DOI: 10.1107/S1600536808039937

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar compounds, see: Choi et al. (2008a ▶,b ▶).

Experimental

Crystal data

C14H15ClO4S M = 314.77 Triclinic, a = 7.8824 (6) Å b = 10.0352 (8) Å c = 10.9004 (8) Å α = 69.254 (1)° β = 81.662 (1)° γ = 67.703 (1)° V = 745.98 (10) Å3 Z = 2 Mo Kα radiation μ = 0.41 mm−1 T = 298 (2) K 0.50 × 0.40 × 0.15 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1999 ▶) T min = 0.816, T max = 0.939 5508 measured reflections 2602 independent reflections 2354 reflections with I > 2σ(I) R int = 0.017

Refinement

R[F 2 > 2σ(F 2)] = 0.048 wR(F 2) = 0.124 S = 1.12 2602 reflections 184 parameters H-atom parameters constrained Δρmax = 0.49 e Å−3 Δρmin = −0.29 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808039937/ng2521sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808039937/ng2521Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C14H15ClO4SZ = 2
Mr = 314.77F(000) = 328
Triclinic, P1Dx = 1.401 Mg m3
Hall symbol: -P 1Melting point = 422–423 K
a = 7.8824 (6) ÅMo Kα radiation, λ = 0.71073 Å
b = 10.0352 (8) ÅCell parameters from 4167 reflections
c = 10.9004 (8) Åθ = 2.5–28.3°
α = 69.254 (1)°µ = 0.41 mm1
β = 81.662 (1)°T = 298 K
γ = 67.703 (1)°Plate, colorless
V = 745.98 (10) Å30.50 × 0.40 × 0.15 mm
Bruker SMART CCD diffractometer2602 independent reflections
Radiation source: fine-focus sealed tube2354 reflections with I > 2σ(I)
graphiteRint = 0.017
Detector resolution: 10.0 pixels mm-1θmax = 25.0°, θmin = 2.5°
φ and ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Sheldrick, 1999)k = −11→11
Tmin = 0.816, Tmax = 0.939l = −12→12
5508 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.048Hydrogen site location: difference Fourier map
wR(F2) = 0.125H-atom parameters constrained
S = 1.12w = 1/[σ2(Fo2) + (0.0534P)2 + 0.4971P] where P = (Fo2 + 2Fc2)/3
2602 reflections(Δ/σ)max < 0.001
184 parametersΔρmax = 0.49 e Å3
0 restraintsΔρmin = −0.29 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.74726 (9)0.60225 (8)0.54010 (6)0.0480 (2)
Cl0.29574 (12)0.21443 (10)0.87346 (10)0.0816 (3)
O10.8348 (2)0.45903 (19)0.91914 (16)0.0435 (4)
O20.7488 (3)0.4832 (3)0.48756 (19)0.0637 (6)
O31.0254 (3)0.8446 (2)0.7284 (2)0.0582 (5)
O40.7414 (3)0.8557 (2)0.7070 (2)0.0674 (6)
C10.7475 (3)0.5246 (3)0.7125 (2)0.0393 (5)
C20.6447 (3)0.4337 (3)0.7973 (2)0.0378 (5)
C30.5137 (3)0.3799 (3)0.7797 (3)0.0462 (6)
H30.46860.40430.69720.055*
C40.4550 (4)0.2888 (3)0.8910 (3)0.0510 (7)
C50.5171 (4)0.2520 (3)1.0159 (3)0.0544 (7)
H50.47200.19051.08780.065*
C60.6450 (4)0.3061 (3)1.0341 (3)0.0486 (6)
H60.68780.28321.11700.058*
C70.7062 (3)0.3959 (3)0.9229 (2)0.0408 (5)
C80.8579 (3)0.5352 (3)0.7894 (2)0.0409 (5)
C90.9910 (3)0.6147 (3)0.7601 (3)0.0455 (6)
H9A1.06670.59470.68560.055*
H9B1.07080.57350.83470.055*
C100.9005 (4)0.7845 (3)0.7302 (2)0.0437 (6)
C110.9615 (5)1.0095 (3)0.7059 (4)0.0697 (9)
H110.85281.06420.65030.084*
C121.1212 (8)1.0569 (5)0.6388 (5)0.1199 (18)
H12A1.08561.16560.61420.180*
H12B1.15701.02670.56190.180*
H12C1.22261.00850.69790.180*
C130.9213 (8)1.0315 (4)0.8347 (5)0.1195 (19)
H13A0.82550.99380.87770.179*
H13B0.88251.13810.82330.179*
H13C1.02960.97700.88720.179*
C140.5183 (4)0.7385 (4)0.5211 (3)0.0671 (8)
H14A0.49770.79980.43040.101*
H14B0.50180.80270.57280.101*
H14C0.43270.68610.54990.101*
U11U22U33U12U13U23
S0.0489 (4)0.0589 (4)0.0385 (4)−0.0261 (3)−0.0038 (3)−0.0100 (3)
Cl0.0694 (5)0.0748 (6)0.1092 (7)−0.0480 (5)−0.0073 (5)−0.0132 (5)
O10.0486 (10)0.0464 (9)0.0398 (9)−0.0184 (8)−0.0057 (7)−0.0154 (7)
O20.0685 (13)0.0804 (14)0.0515 (12)−0.0250 (11)−0.0047 (9)−0.0322 (11)
O30.0622 (12)0.0429 (10)0.0740 (13)−0.0240 (9)−0.0176 (10)−0.0120 (9)
O40.0501 (12)0.0510 (11)0.0946 (16)−0.0161 (10)−0.0120 (11)−0.0139 (11)
C10.0427 (13)0.0388 (12)0.0383 (13)−0.0157 (10)−0.0035 (10)−0.0124 (10)
C20.0390 (12)0.0345 (12)0.0401 (13)−0.0113 (10)−0.0023 (10)−0.0134 (10)
C30.0438 (14)0.0438 (14)0.0532 (15)−0.0174 (11)−0.0051 (11)−0.0146 (12)
C40.0428 (14)0.0421 (14)0.0682 (18)−0.0179 (11)−0.0002 (12)−0.0153 (13)
C50.0541 (16)0.0437 (14)0.0553 (16)−0.0172 (13)0.0089 (13)−0.0084 (12)
C60.0509 (15)0.0428 (14)0.0432 (14)−0.0102 (12)0.0007 (11)−0.0111 (11)
C70.0404 (13)0.0353 (12)0.0457 (13)−0.0099 (10)−0.0016 (10)−0.0155 (10)
C80.0430 (13)0.0374 (12)0.0434 (13)−0.0130 (10)−0.0041 (10)−0.0145 (10)
C90.0443 (14)0.0476 (14)0.0509 (15)−0.0201 (11)−0.0050 (11)−0.0176 (12)
C100.0484 (15)0.0482 (14)0.0384 (13)−0.0223 (12)−0.0030 (11)−0.0121 (11)
C110.082 (2)0.0406 (15)0.085 (2)−0.0242 (15)−0.0304 (18)−0.0055 (15)
C120.181 (5)0.083 (3)0.115 (4)−0.086 (3)0.035 (3)−0.027 (3)
C130.159 (5)0.056 (2)0.121 (4)−0.018 (3)0.045 (3)−0.042 (2)
C140.0657 (19)0.0586 (18)0.0640 (19)−0.0112 (15)−0.0194 (15)−0.0095 (15)
S—O21.493 (2)C6—C71.378 (4)
S—C11.761 (2)C6—H60.9300
S—C141.790 (3)C8—C91.482 (3)
Cl—C41.747 (3)C9—C101.506 (4)
O1—C81.372 (3)C9—H9A0.9700
O1—C71.374 (3)C9—H9B0.9700
O3—C101.331 (3)C11—C131.469 (6)
O3—C111.472 (3)C11—C121.513 (6)
O4—C101.196 (3)C11—H110.9800
C1—C81.348 (3)C12—H12A0.9600
C1—C21.445 (3)C12—H12B0.9600
C2—C71.392 (3)C12—H12C0.9600
C2—C31.396 (3)C13—H13A0.9600
C3—C41.376 (4)C13—H13B0.9600
C3—H30.9300C13—H13C0.9600
C4—C51.390 (4)C14—H14A0.9600
C5—C61.378 (4)C14—H14B0.9600
C5—H50.9300C14—H14C0.9600
O2—S—C1107.34 (12)C10—C9—H9A109.0
O2—S—C14106.36 (14)C8—C9—H9B109.0
C1—S—C1498.16 (14)C10—C9—H9B109.0
C8—O1—C7106.25 (18)H9A—C9—H9B107.8
C10—O3—C11117.8 (2)O4—C10—O3124.9 (2)
C8—C1—C2107.3 (2)O4—C10—C9125.3 (2)
C8—C1—S123.59 (19)O3—C10—C9109.8 (2)
C2—C1—S129.04 (18)C13—C11—O3107.5 (3)
C7—C2—C3119.7 (2)C13—C11—C12111.2 (4)
C7—C2—C1104.6 (2)O3—C11—C12104.8 (3)
C3—C2—C1135.7 (2)C13—C11—H11111.0
C4—C3—C2116.3 (2)O3—C11—H11111.0
C4—C3—H3121.8C12—C11—H11111.0
C2—C3—H3121.8C11—C12—H12A109.5
C3—C4—C5123.4 (2)C11—C12—H12B109.5
C3—C4—Cl118.1 (2)H12A—C12—H12B109.5
C5—C4—Cl118.5 (2)C11—C12—H12C109.5
C6—C5—C4120.5 (2)H12A—C12—H12C109.5
C6—C5—H5119.8H12B—C12—H12C109.5
C4—C5—H5119.8C11—C13—H13A109.5
C5—C6—C7116.4 (2)C11—C13—H13B109.5
C5—C6—H6121.8H13A—C13—H13B109.5
C7—C6—H6121.8C11—C13—H13C109.5
O1—C7—C6125.7 (2)H13A—C13—H13C109.5
O1—C7—C2110.7 (2)H13B—C13—H13C109.5
C6—C7—C2123.6 (2)S—C14—H14A109.5
C1—C8—O1111.2 (2)S—C14—H14B109.5
C1—C8—C9132.5 (2)H14A—C14—H14B109.5
O1—C8—C9116.3 (2)S—C14—H14C109.5
C8—C9—C10113.1 (2)H14A—C14—H14C109.5
C8—C9—H9A109.0H14B—C14—H14C109.5
O2—S—C1—C8133.8 (2)C3—C2—C7—O1179.7 (2)
C14—S—C1—C8−116.2 (2)C1—C2—C7—O10.9 (3)
O2—S—C1—C2−42.4 (3)C3—C2—C7—C60.1 (4)
C14—S—C1—C267.7 (3)C1—C2—C7—C6−178.6 (2)
C8—C1—C2—C7−0.3 (3)C2—C1—C8—O1−0.5 (3)
S—C1—C2—C7176.39 (19)S—C1—C8—O1−177.37 (16)
C8—C1—C2—C3−178.7 (3)C2—C1—C8—C9−178.7 (2)
S—C1—C2—C3−2.1 (4)S—C1—C8—C94.4 (4)
C7—C2—C3—C4−0.9 (4)C7—O1—C8—C11.1 (3)
C1—C2—C3—C4177.4 (3)C7—O1—C8—C9179.6 (2)
C2—C3—C4—C51.1 (4)C1—C8—C9—C1075.3 (4)
C2—C3—C4—Cl−178.30 (19)O1—C8—C9—C10−102.9 (2)
C3—C4—C5—C6−0.5 (4)C11—O3—C10—O44.8 (4)
Cl—C4—C5—C6178.9 (2)C11—O3—C10—C9−177.6 (2)
C4—C5—C6—C7−0.3 (4)C8—C9—C10—O4−13.6 (4)
C8—O1—C7—C6178.3 (2)C8—C9—C10—O3168.8 (2)
C8—O1—C7—C2−1.2 (3)C10—O3—C11—C1391.0 (4)
C5—C6—C7—O1−179.0 (2)C10—O3—C11—C12−150.6 (3)
C5—C6—C7—C20.5 (4)
D—H···AD—HH···AD···AD—H···A
C13—H13B···Cgi0.962.783.515 (3)134
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13BCgi0.962.783.515 (3)134

Symmetry code: (i) . Cg is the centroid of the C2–C7 benzene ring.

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Isopropyl 2-(5-bromo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08

3.  Isopropyl 2-(5-iodo-3-methyl-sulfinyl-1-benzofuran-2-yl)acetate.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-20
  3 in total

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