Literature DB >> 21581667

N-(3-Bromo-1,4-dioxo-1,4-dihydro-2-naphth-yl)-2-chloro-N-(2-chloro-benzoyl)benzamide.

Emmanuel S Akinboye1, Ray J Butcher, Yakini Brandy, Tolulope A Adesiyun, Oladapo Bakare.   

Abstract

The title compound, C(24)H(12)BrCl(2)NO(4), was synthesized from 2-amino-3-bromo-1,4-naphthoquinone and 2-chloro-benzoyl chloride. The crystal structure shows that each of the chloro-phenyl rings is inclined at about 60° to the naphthoquinone ring system. The two chloro-phenyl rings adopt a conformation that ensures that chlorine substituents are anti so as to reduce electronic repulsion. An examination of the packing shows close O⋯Br and Cl⋯Cl contacts of 2.947 (2) and 3.346 (1) Å, respectively. In addition, the molecules are linked by weak intermolecular C-H⋯O and C-H⋯Cl interactions.

Entities:  

Year:  2008        PMID: 21581667      PMCID: PMC2967943          DOI: 10.1107/S1600536808039214

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For similar structures, see: Lien et al. (1997 ▶); Huang et al. (1998 ▶); Bakare et al. (2003 ▶); Copeland et al. (2007 ▶); Win et al. (2005 ▶); Rubin-Preminger et al. (2004 ▶). For the properties of compounds with the chloro-1,4-naphthoquinone skeleton, see: Chang et al. (1999 ▶); Ertl et al. (1999 ▶).

Experimental

Crystal data

C24H12BrCl2NO4 M = 529.16 Monoclinic, a = 12.8590 (3) Å b = 7.81260 (10) Å c = 21.9574 (4) Å β = 106.272 (2)° V = 2117.53 (7) Å3 Z = 4 Mo Kα radiation μ = 2.23 mm−1 T = 200 (2) K 0.46 × 0.18 × 0.15 mm

Data collection

Oxford Diffraction Gemini R diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007 ▶) T min = 0.945, T max = 1.000 (expected range = 0.676–0.716) 27164 measured reflections 8407 independent reflections 4388 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.047 wR(F 2) = 0.123 S = 0.92 8407 reflections 289 parameters H-atom parameters constrained Δρmax = 2.03 e Å−3 Δρmin = −0.70 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2007 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2007 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808039214/bq2099sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808039214/bq2099Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H12BrCl2NO4F(000) = 1056
Mr = 529.16Dx = 1.660 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
a = 12.8590 (3) ÅCell parameters from 6385 reflections
b = 7.8126 (1) Åθ = 4.5–34.8°
c = 21.9574 (4) ŵ = 2.23 mm1
β = 106.272 (2)°T = 200 K
V = 2117.53 (7) Å3Needle, pale yellow
Z = 40.46 × 0.18 × 0.15 mm
Oxford Diffraction Gemini R diffractometer8407 independent reflections
Radiation source: fine-focus sealed tube4388 reflections with I > 2σ(I)
graphiteRint = 0.041
Detector resolution: 10.5081 pixels mm-1θmax = 34.8°, θmin = 4.5°
φ and ω scansh = −19→20
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2007)k = −12→12
Tmin = 0.945, Tmax = 1.000l = −34→28
27164 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.047Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.123H-atom parameters constrained
S = 0.92w = 1/[σ2(Fo2) + (0.0618P)2] where P = (Fo2 + 2Fc2)/3
8407 reflections(Δ/σ)max = 0.003
289 parametersΔρmax = 2.03 e Å3
0 restraintsΔρmin = −0.70 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Br0.16560 (2)0.07777 (4)0.693146 (11)0.03453 (9)
Cl1A0.54339 (7)0.57382 (8)0.71533 (4)0.04354 (18)
Cl1B0.56864 (7)−0.14656 (8)0.60493 (4)0.04445 (19)
O1−0.05313 (17)0.1335 (4)0.60398 (10)0.0601 (7)
O20.24523 (15)0.3427 (3)0.49462 (8)0.0406 (5)
O1A0.31064 (15)0.4218 (2)0.68149 (8)0.0325 (4)
O1B0.33990 (16)−0.0028 (2)0.54700 (9)0.0389 (5)
N0.32004 (15)0.2100 (2)0.61270 (8)0.0207 (4)
C10.20724 (18)0.2157 (3)0.58269 (10)0.0207 (4)
C20.1317 (2)0.1653 (3)0.61071 (10)0.0251 (5)
C30.0139 (2)0.1748 (3)0.57732 (11)0.0298 (5)
C4−0.01873 (19)0.2343 (3)0.51068 (10)0.0239 (5)
C5−0.1271 (2)0.2365 (3)0.47668 (11)0.0290 (5)
H5A−0.18030.19630.49570.035*
C6−0.1578 (2)0.2969 (3)0.41533 (12)0.0342 (6)
H6A−0.23230.29960.39250.041*
C7−0.0814 (2)0.3536 (4)0.38673 (12)0.0367 (6)
H7A−0.10370.39550.34440.044*
C80.0275 (2)0.3495 (3)0.41937 (11)0.0333 (6)
H8A0.08000.38730.39940.040*
C90.0601 (2)0.2897 (3)0.48187 (10)0.0237 (5)
C100.1758 (2)0.2874 (3)0.51699 (10)0.0252 (5)
C1A0.36326 (19)0.3069 (3)0.66818 (10)0.0211 (4)
C2A0.47008 (19)0.2488 (3)0.71062 (10)0.0235 (5)
C3A0.5541 (2)0.3614 (3)0.73579 (11)0.0292 (5)
C4A0.6516 (2)0.3043 (4)0.77548 (12)0.0405 (7)
H4AA0.70950.38230.79140.049*
C5A0.6642 (3)0.1328 (4)0.79186 (13)0.0454 (7)
H5AA0.73090.09330.81920.054*
C6A0.5810 (3)0.0197 (4)0.76886 (12)0.0404 (7)
H6AA0.5896−0.09740.78090.048*
C7A0.4848 (2)0.0758 (3)0.72825 (11)0.0298 (5)
H7AA0.4277−0.00350.71200.036*
C1B0.38232 (19)0.1143 (3)0.57957 (11)0.0235 (5)
C2B0.49383 (19)0.1791 (3)0.58353 (10)0.0228 (5)
C3B0.5818 (2)0.0694 (3)0.59230 (11)0.0260 (5)
C4B0.6829 (2)0.1307 (3)0.59320 (12)0.0319 (6)
H4BA0.74320.05520.60070.038*
C5B0.6956 (2)0.3040 (3)0.58300 (12)0.0323 (6)
H5BA0.76480.34700.58320.039*
C6B0.6095 (2)0.4132 (3)0.57274 (12)0.0307 (5)
H6BA0.61860.53080.56460.037*
C7B0.5094 (2)0.3529 (3)0.57424 (10)0.0252 (5)
H7BA0.45050.43040.56890.030*
U11U22U33U12U13U23
Br0.02744 (14)0.05392 (17)0.02277 (12)−0.00532 (12)0.00791 (9)0.01052 (11)
Cl1A0.0473 (5)0.0356 (3)0.0481 (4)−0.0096 (3)0.0140 (3)−0.0032 (3)
Cl1B0.0482 (5)0.0279 (3)0.0601 (5)0.0041 (3)0.0198 (4)0.0029 (3)
O10.0209 (11)0.120 (2)0.0407 (12)−0.0055 (12)0.0117 (9)0.0258 (13)
O20.0219 (10)0.0688 (12)0.0316 (10)−0.0072 (9)0.0084 (8)0.0174 (9)
O1A0.0269 (10)0.0382 (9)0.0299 (9)0.0062 (8)0.0040 (7)−0.0080 (8)
O1B0.0308 (11)0.0415 (10)0.0461 (11)−0.0133 (9)0.0134 (8)−0.0235 (9)
N0.0144 (9)0.0301 (9)0.0175 (8)−0.0022 (8)0.0044 (7)−0.0041 (7)
C10.0158 (11)0.0288 (11)0.0170 (10)−0.0020 (9)0.0040 (8)−0.0006 (9)
C20.0196 (12)0.0373 (13)0.0190 (10)−0.0022 (10)0.0061 (9)0.0007 (9)
C30.0178 (12)0.0454 (14)0.0279 (12)−0.0019 (11)0.0090 (10)0.0050 (11)
C40.0178 (12)0.0308 (12)0.0222 (11)−0.0022 (10)0.0043 (8)−0.0022 (9)
C50.0175 (12)0.0344 (13)0.0341 (13)−0.0033 (10)0.0056 (10)−0.0015 (11)
C60.0199 (13)0.0412 (14)0.0349 (13)0.0011 (11)−0.0033 (10)−0.0042 (12)
C70.0324 (16)0.0460 (15)0.0258 (12)0.0015 (13)−0.0016 (11)0.0050 (11)
C80.0289 (15)0.0462 (14)0.0242 (12)−0.0028 (12)0.0065 (10)0.0057 (11)
C90.0216 (12)0.0282 (11)0.0195 (10)−0.0017 (10)0.0028 (8)0.0004 (9)
C100.0209 (12)0.0329 (12)0.0217 (10)−0.0036 (10)0.0062 (9)0.0003 (9)
C1A0.0212 (12)0.0238 (10)0.0179 (10)−0.0029 (9)0.0047 (8)0.0008 (8)
C2A0.0197 (12)0.0345 (12)0.0163 (9)−0.0008 (10)0.0051 (8)−0.0021 (9)
C3A0.0252 (13)0.0389 (13)0.0235 (11)−0.0071 (11)0.0068 (10)−0.0034 (10)
C4A0.0286 (15)0.0624 (18)0.0266 (13)−0.0115 (14)0.0009 (11)−0.0042 (13)
C5A0.0344 (17)0.0663 (19)0.0318 (14)0.0121 (15)0.0031 (12)0.0050 (14)
C6A0.049 (2)0.0436 (15)0.0270 (13)0.0128 (14)0.0079 (12)0.0035 (12)
C7A0.0329 (14)0.0333 (12)0.0222 (11)0.0048 (11)0.0058 (9)−0.0010 (10)
C1B0.0189 (12)0.0303 (12)0.0221 (10)0.0003 (9)0.0070 (9)−0.0014 (9)
C2B0.0200 (12)0.0318 (12)0.0165 (9)0.0000 (10)0.0051 (8)−0.0029 (9)
C3B0.0265 (13)0.0287 (11)0.0251 (11)0.0048 (11)0.0111 (9)0.0001 (10)
C4B0.0249 (14)0.0430 (14)0.0290 (12)0.0044 (11)0.0094 (10)0.0000 (11)
C5B0.0241 (14)0.0441 (14)0.0313 (13)−0.0098 (12)0.0119 (10)−0.0066 (11)
C6B0.0326 (14)0.0322 (12)0.0309 (12)−0.0063 (12)0.0148 (10)−0.0015 (11)
C7B0.0201 (12)0.0349 (12)0.0221 (11)−0.0026 (10)0.0083 (9)−0.0004 (10)
Br—C21.869 (2)C1A—C2A1.498 (3)
Cl1A—C3A1.715 (3)C2A—C3A1.383 (3)
Cl1B—C3B1.726 (2)C2A—C7A1.404 (3)
O1—C31.214 (3)C3A—C4A1.384 (4)
O2—C101.213 (3)C4A—C5A1.385 (4)
O1A—C1A1.209 (3)C4A—H4AA0.9500
O1B—C1B1.195 (3)C5A—C6A1.370 (5)
N—C1A1.410 (3)C5A—H5AA0.9500
N—C11.416 (3)C6A—C7A1.378 (4)
N—C1B1.434 (3)C6A—H6AA0.9500
C1—C21.346 (3)C7A—H7AA0.9500
C1—C101.494 (3)C1B—C2B1.500 (3)
C2—C31.489 (3)C2B—C3B1.389 (3)
C3—C41.479 (3)C2B—C7B1.396 (3)
C4—C51.384 (3)C3B—C4B1.381 (4)
C4—C91.405 (3)C4B—C5B1.390 (4)
C5—C61.377 (3)C4B—H4BA0.9500
C5—H5A0.9500C5B—C6B1.365 (4)
C6—C71.378 (4)C5B—H5BA0.9500
C6—H6A0.9500C6B—C7B1.380 (4)
C7—C81.383 (4)C6B—H6BA0.9500
C7—H7A0.9500C7B—H7BA0.9500
C8—C91.398 (3)H6AA—Cl1Ai2.923
C8—H8A0.9500H6BA—Cl1Bii2.805
C9—C101.471 (3)
C1A—N—C1119.32 (18)C7A—C2A—C1A119.5 (2)
C1A—N—C1B125.28 (19)C2A—C3A—C4A121.0 (3)
C1—N—C1B115.17 (17)C2A—C3A—Cl1A120.9 (2)
C2—C1—N123.7 (2)C4A—C3A—Cl1A118.0 (2)
C2—C1—C10121.1 (2)C3A—C4A—C5A119.6 (3)
N—C1—C10115.22 (18)C3A—C4A—H4AA120.2
C1—C2—C3121.7 (2)C5A—C4A—H4AA120.2
C1—C2—Br123.22 (18)C6A—C5A—C4A120.4 (3)
C3—C2—Br115.11 (16)C6A—C5A—H5AA119.8
O1—C3—C4121.2 (2)C4A—C5A—H5AA119.8
O1—C3—C2120.8 (2)C5A—C6A—C7A120.0 (3)
C4—C3—C2118.1 (2)C5A—C6A—H6AA120.0
C5—C4—C9119.8 (2)C7A—C6A—H6AA120.0
C5—C4—C3120.1 (2)C6A—C7A—C2A120.8 (3)
C9—C4—C3120.1 (2)C6A—C7A—H7AA119.6
C6—C5—C4120.1 (2)C2A—C7A—H7AA119.6
C6—C5—H5A120.0O1B—C1B—N118.5 (2)
C4—C5—H5A120.0O1B—C1B—C2B124.2 (2)
C5—C6—C7120.7 (2)N—C1B—C2B117.08 (19)
C5—C6—H6A119.7C3B—C2B—C7B118.4 (2)
C7—C6—H6A119.7C3B—C2B—C1B121.8 (2)
C6—C7—C8120.2 (2)C7B—C2B—C1B119.6 (2)
C6—C7—H7A119.9C4B—C3B—C2B121.0 (2)
C8—C7—H7A119.9C4B—C3B—Cl1B118.11 (19)
C7—C8—C9119.9 (2)C2B—C3B—Cl1B120.86 (19)
C7—C8—H8A120.1C3B—C4B—C5B119.2 (2)
C9—C8—H8A120.1C3B—C4B—H4BA120.4
C8—C9—C4119.3 (2)C5B—C4B—H4BA120.4
C8—C9—C10120.0 (2)C6B—C5B—C4B120.6 (2)
C4—C9—C10120.7 (2)C6B—C5B—H5BA119.7
O2—C10—C9122.3 (2)C4B—C5B—H5BA119.7
O2—C10—C1119.6 (2)C5B—C6B—C7B120.1 (2)
C9—C10—C1118.1 (2)C5B—C6B—H6BA119.9
O1A—C1A—N119.8 (2)C7B—C6B—H6BA119.9
O1A—C1A—C2A123.5 (2)C6B—C7B—C2B120.5 (2)
N—C1A—C2A116.47 (19)C6B—C7B—H7BA119.7
C3A—C2A—C7A118.2 (2)C2B—C7B—H7BA119.7
C3A—C2A—C1A122.3 (2)
C1A—N—C1—C2−61.2 (3)C1—N—C1A—C2A157.69 (19)
C1B—N—C1—C2124.0 (2)C1B—N—C1A—C2A−28.1 (3)
C1A—N—C1—C10117.1 (2)O1A—C1A—C2A—C3A−51.8 (3)
C1B—N—C1—C10−57.7 (3)N—C1A—C2A—C3A133.8 (2)
N—C1—C2—C3179.6 (2)O1A—C1A—C2A—C7A125.2 (2)
C10—C1—C2—C31.4 (4)N—C1A—C2A—C7A−49.3 (3)
N—C1—C2—Br−0.8 (3)C7A—C2A—C3A—C4A2.3 (4)
C10—C1—C2—Br−179.02 (17)C1A—C2A—C3A—C4A179.3 (2)
C1—C2—C3—O1−177.8 (3)C7A—C2A—C3A—Cl1A178.70 (18)
Br—C2—C3—O12.5 (4)C1A—C2A—C3A—Cl1A−4.3 (3)
C1—C2—C3—C42.8 (4)C2A—C3A—C4A—C5A−2.0 (4)
Br—C2—C3—C4−176.85 (17)Cl1A—C3A—C4A—C5A−178.5 (2)
O1—C3—C4—C5−2.9 (4)C3A—C4A—C5A—C6A0.2 (4)
C2—C3—C4—C5176.5 (2)C4A—C5A—C6A—C7A1.2 (4)
O1—C3—C4—C9176.8 (3)C5A—C6A—C7A—C2A−0.9 (4)
C2—C3—C4—C9−3.9 (4)C3A—C2A—C7A—C6A−0.9 (4)
C9—C4—C5—C6−1.7 (4)C1A—C2A—C7A—C6A−177.9 (2)
C3—C4—C5—C6177.9 (2)C1A—N—C1B—O1B156.2 (2)
C4—C5—C6—C70.9 (4)C1—N—C1B—O1B−29.3 (3)
C5—C6—C7—C80.3 (4)C1A—N—C1B—C2B−29.4 (3)
C6—C7—C8—C9−0.8 (4)C1—N—C1B—C2B145.08 (19)
C7—C8—C9—C40.0 (4)O1B—C1B—C2B—C3B−48.2 (3)
C7—C8—C9—C10−179.2 (2)N—C1B—C2B—C3B137.8 (2)
C5—C4—C9—C81.2 (4)O1B—C1B—C2B—C7B127.7 (3)
C3—C4—C9—C8−178.4 (2)N—C1B—C2B—C7B−46.3 (3)
C5—C4—C9—C10−179.6 (2)C7B—C2B—C3B—C4B1.4 (3)
C3—C4—C9—C100.8 (3)C1B—C2B—C3B—C4B177.3 (2)
C8—C9—C10—O23.2 (4)C7B—C2B—C3B—Cl1B179.26 (17)
C4—C9—C10—O2−176.0 (2)C1B—C2B—C3B—Cl1B−4.8 (3)
C8—C9—C10—C1−177.5 (2)C2B—C3B—C4B—C5B−2.2 (3)
C4—C9—C10—C13.3 (3)Cl1B—C3B—C4B—C5B179.85 (19)
C2—C1—C10—O2174.9 (2)C3B—C4B—C5B—C6B0.6 (4)
N—C1—C10—O2−3.4 (3)C4B—C5B—C6B—C7B1.9 (4)
C2—C1—C10—C9−4.4 (3)C5B—C6B—C7B—C2B−2.7 (4)
N—C1—C10—C9177.21 (19)C3B—C2B—C7B—C6B1.1 (3)
C1—N—C1A—O1A−17.0 (3)C1B—C2B—C7B—C6B−174.9 (2)
C1B—N—C1A—O1A157.3 (2)
D—H···AD—HH···AD···AD—H···A
C5—H5A···O1Biii0.952.513.209 (3)131
C4B—H4BA···O1iv0.952.673.335 (3)128
C6B—H6BA···O2v0.952.653.296 (3)126
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C5—H5A⋯O1Bi0.952.513.209 (3)131
C4B—H4BA⋯O1ii0.952.673.335 (3)128
C6B—H6BA⋯O2iii0.952.653.296 (3)126

Symmetry codes: (i) ; (ii) ; (iii) .

  5 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Synthesis and antiplatelet, antiinflammatory, and antiallergic activities of substituted 3-chloro-5,8-dimethoxy-1,4-naphthoquinone and related compounds.

Authors:  L J Huang; F C Chang; K H Lee; J P Wang; C M Teng; S C Kuo
Journal:  Bioorg Med Chem       Date:  1998-12       Impact factor: 3.641

3.  Synthesis and antiplatelet, antiinflammatory, and antiallergic activities of 2-substituted 3-chloro-1,4-naphthoquinone derivatives.

Authors:  J C Lien; L J Huang; J P Wang; C M Teng; K H Lee; S C Kuo
Journal:  Bioorg Med Chem       Date:  1997-12       Impact factor: 3.641

4.  Cytotoxicity of 2,3-dichloro-5,8-dimethoxy-1,4-naphthoquinone in androgen-dependent and -independent prostate cancer cell lines.

Authors:  Robert L Copeland; Jharna R Das; Oladapo Bakare; Nkechi M Enwerem; Solomon Berhe; Kenguele Hillaire; Douglas White; Desta Beyene; Olakunle O Kassim; Yasmine M Kanaan
Journal:  Anticancer Res       Date:  2007 May-Jun       Impact factor: 2.480

5.  Synthesis and MEK1 inhibitory activities of imido-substituted 2-chloro-1,4-naphthoquinones.

Authors:  Oladapo Bakare; Curtis L Ashendel; Hairuo Peng; Leon H Zalkow; Edward M Burgess
Journal:  Bioorg Med Chem       Date:  2003-07-17       Impact factor: 3.641

  5 in total
  1 in total

1.  N-Benzoyl-N-(1,4-dioxonaphthalen-2-yl)benzamide.

Authors:  Yakini Brandy; Ray J Butcher; Oladapo Bakare
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-07-07
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.