Literature DB >> 21581579

N-[(E)-(5-Methyl-thio-phen-2-yl)methyl-idene]-1H-1,2,4-triazol-3-amine.

Zahid H Chohan, Muhammad Hanif, M Nawaz Tahir.   

Abstract

In the title Schiff base, C(8)H(8)N(4)S, a condensation product of 5-methyl-thio-phene-2-carboxaldehyde and 3-amino-1,2,4-triazole, the dihedral angle between the triazolyl and thienyl rings is 6.44 (14)°. The compound exists as a polymeric chain arising from inter-molecular N-H⋯N bonding.

Entities:  

Year:  2008        PMID: 21581579      PMCID: PMC2968039          DOI: 10.1107/S1600536808041494

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a related comound, see: Chohan et al. (2009 ▶). For the biological properties of such compounds, see: Foroumadi et al. (2003 ▶); Manfredini et al. (2000 ▶).

Experimental

Crystal data

C8H8N4S M = 192.24 Orthorhombic, a = 7.2570 (7) Å b = 8.9522 (8) Å c = 14.2930 (15) Å V = 928.56 (16) Å3 Z = 4 Mo Kα radiation μ = 0.31 mm−1 T = 296 (2) K 0.24 × 0.16 × 0.14 mm

Data collection

Bruker KAPPA APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.928, T max = 0.956 5793 measured reflections 2206 independent reflections 1859 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.097 S = 1.05 2206 reflections 134 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.23 e Å−3 Absolute structure: Flack (1983 ▶), 854 Friedel pairs Flack parameter: −0.02 (10) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and PLATON (Spek, 2003 ▶); software used to prepare material for publication: WinGX publication routines (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks text, I. DOI: 10.1107/S1600536808041494/ng2524sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808041494/ng2524Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C8H8N4SF(000) = 400
Mr = 192.24Dx = 1.375 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 2206 reflections
a = 7.2570 (7) Åθ = 2.7–28.3°
b = 8.9522 (8) ŵ = 0.31 mm1
c = 14.2930 (15) ÅT = 296 K
V = 928.56 (16) Å3Prismatic, light brown
Z = 40.24 × 0.16 × 0.14 mm
Bruker KAPPA APEXII CCD diffractometer2206 independent reflections
Radiation source: fine-focus sealed tube1859 reflections with I > 2σ(I)
graphiteRint = 0.034
Detector resolution: 7.4 pixels mm-1θmax = 28.3°, θmin = 2.7°
ω scansh = −9→9
Absorption correction: multi-scan (SADABS; Bruker, 2005)k = −11→11
Tmin = 0.928, Tmax = 0.956l = −17→19
5793 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.034H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.097w = 1/[σ2(Fo2) + (0.0562P)2 + 0.0383P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2206 reflectionsΔρmax = 0.20 e Å3
134 parametersΔρmin = −0.22 e Å3
0 restraintsAbsolute structure: Flack (1983), 854 Friedel pairs
Primary atom site location: structure-invariant direct methodsFlack parameter: −0.02 (10)
Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell e.s.d.'s are taken into account in the estimation of distances, angles and torsion angles
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.48892 (7)−0.18020 (5)0.00175 (3)0.0512 (2)
N10.5269 (2)0.13362 (16)0.09627 (10)0.0456 (4)
N20.4898 (2)0.29617 (16)0.22417 (10)0.0498 (5)
N30.5397 (2)0.43946 (17)0.23930 (11)0.0502 (5)
N40.6332 (3)0.39225 (19)0.09806 (13)0.0659 (7)
C10.5665 (3)−0.0136 (2)−0.04286 (12)0.0460 (5)
C20.6222 (3)−0.0303 (3)−0.13344 (14)0.0565 (7)
C30.6008 (3)−0.1767 (3)−0.16735 (14)0.0562 (7)
C40.5306 (3)−0.2720 (2)−0.10199 (12)0.0497 (5)
C50.4937 (4)−0.4350 (3)−0.11161 (16)0.0737 (9)
C60.5724 (3)0.1226 (2)0.00957 (13)0.0473 (5)
C70.5491 (3)0.27297 (19)0.13780 (12)0.0432 (5)
C80.6228 (3)0.4940 (3)0.16478 (17)0.0654 (8)
H20.663 (3)0.048 (2)−0.1784 (19)0.0678*
H30.629 (3)−0.210 (3)−0.2327 (18)0.0675*
H3N0.515 (3)0.488 (3)0.2891 (17)0.0602*
H5A0.52067−0.48427−0.053540.1103*
H5B0.57023−0.47560−0.160150.1103*
H5C0.36648−0.45026−0.127340.1103*
H60.621 (3)0.209 (2)−0.0237 (15)0.0567*
H80.671 (4)0.595 (2)0.1599 (17)0.0785*
U11U22U33U12U13U23
S10.0642 (3)0.0540 (3)0.0354 (2)−0.0070 (2)0.0078 (2)−0.0047 (2)
N10.0516 (8)0.0465 (7)0.0386 (7)0.0015 (7)−0.0023 (7)−0.0011 (6)
N20.0668 (10)0.0434 (7)0.0392 (7)0.0024 (7)0.0000 (8)0.0002 (5)
N30.0644 (10)0.0439 (8)0.0422 (8)0.0024 (7)−0.0020 (8)−0.0053 (6)
N40.0895 (14)0.0554 (10)0.0529 (10)−0.0181 (9)0.0184 (10)−0.0072 (8)
C10.0475 (9)0.0518 (10)0.0388 (8)−0.0018 (7)0.0027 (8)−0.0017 (7)
C20.0641 (13)0.0637 (13)0.0418 (10)−0.0064 (9)0.0110 (9)0.0012 (9)
C30.0605 (12)0.0706 (13)0.0376 (9)0.0014 (10)0.0098 (9)−0.0096 (9)
C40.0515 (10)0.0573 (10)0.0404 (8)−0.0008 (8)0.0011 (8)−0.0092 (7)
C50.100 (2)0.0629 (12)0.0582 (12)−0.0099 (13)0.0055 (13)−0.0160 (10)
C60.0521 (9)0.0499 (9)0.0398 (8)−0.0004 (8)−0.0003 (8)0.0008 (7)
C70.0475 (9)0.0431 (8)0.0391 (8)0.0031 (7)−0.0022 (8)0.0003 (7)
C80.0827 (16)0.0504 (11)0.0630 (13)−0.0152 (11)0.0126 (12)−0.0079 (10)
S1—C11.7169 (19)C1—C61.432 (3)
S1—C41.7220 (18)C2—C31.406 (4)
N1—C61.286 (2)C3—C41.364 (3)
N1—C71.391 (2)C4—C51.490 (3)
N2—N31.350 (2)C2—H21.00 (2)
N2—C71.324 (2)C3—H31.00 (3)
N3—C81.318 (3)C5—H5A0.9600
N4—C71.355 (3)C5—H5B0.9600
N4—C81.321 (3)C5—H5C0.9600
N3—H3N0.85 (3)C6—H60.974 (19)
C1—C21.365 (3)C8—H80.97 (2)
S1···N13.1295 (15)N4···H5Avii2.5700
S1···C4i3.647 (2)N4···H62.39 (2)
N1···S13.1295 (15)C1···N4v3.419 (3)
N1···N3ii2.963 (2)C4···S1viii3.647 (2)
N2···N42.252 (2)C8···N2iii3.241 (3)
N2···C8ii3.241 (3)C7···H3vi3.03 (2)
N2···N3ii3.243 (2)C7···H3Nii2.80 (3)
N3···N1iii2.963 (2)H2···N2iv2.83 (2)
N3···N42.171 (2)H2···N3iv2.87 (2)
N3···N2iii3.243 (2)H3···N2ix2.94 (2)
N4···C1iv3.419 (3)H3···C7ix3.03 (2)
N4···N32.171 (2)H3N···N1iii2.12 (3)
N1···H3Nii2.12 (3)H3N···N2iii2.77 (3)
N2···H8ii2.71 (2)H3N···C7iii2.80 (3)
N2···H2v2.83 (2)H5A···N4x2.5700
N2···H3vi2.94 (2)H6···N42.39 (2)
N2···H3Nii2.77 (3)H8···N2iii2.71 (2)
N3···H2v2.87 (2)
C1—S1—C492.13 (9)N1—C7—N4125.46 (16)
C6—N1—C7116.76 (15)N2—C7—N4114.44 (16)
N3—N2—C7102.19 (14)N3—C8—N4110.7 (2)
N2—N3—C8110.20 (17)C1—C2—H2128.6 (14)
C7—N4—C8102.42 (18)C3—C2—H2117.8 (14)
C8—N3—H3N125.6 (17)C2—C3—H3125.2 (15)
N2—N3—H3N124.1 (17)C4—C3—H3121.9 (15)
S1—C1—C6123.72 (14)C4—C5—H5A109.00
C2—C1—C6125.52 (19)C4—C5—H5B109.00
S1—C1—C2110.75 (16)C4—C5—H5C110.00
C1—C2—C3113.4 (2)H5A—C5—H5B109.00
C2—C3—C4112.85 (18)H5A—C5—H5C109.00
S1—C4—C3110.91 (15)H5B—C5—H5C109.00
C3—C4—C5128.07 (19)N1—C6—H6120.2 (12)
S1—C4—C5121.02 (15)C1—C6—H6115.6 (12)
N1—C6—C1124.19 (17)N3—C8—H8124.6 (15)
N1—C7—N2120.07 (16)N4—C8—H8124.7 (15)
C1—S1—C4—C3−0.12 (18)C8—N4—C7—N2−0.4 (3)
C4—S1—C1—C2−0.28 (18)C7—N4—C8—N30.4 (2)
C4—S1—C1—C6−179.69 (19)C8—N4—C7—N1−178.6 (2)
C1—S1—C4—C5178.8 (2)C2—C1—C6—N1−176.6 (2)
C6—N1—C7—N4−7.9 (3)S1—C1—C2—C30.6 (2)
C7—N1—C6—C1177.03 (19)C6—C1—C2—C3−180.0 (2)
C6—N1—C7—N2173.91 (18)S1—C1—C6—N12.7 (3)
C7—N2—N3—C80.1 (2)C1—C2—C3—C4−0.7 (3)
N3—N2—C7—N1178.54 (17)C2—C3—C4—S10.5 (2)
N3—N2—C7—N40.2 (2)C2—C3—C4—C5−178.4 (2)
N2—N3—C8—N4−0.3 (2)
D—H···AD—HH···AD···AD—H···A
N3—H3n···N1iii0.85 (3)2.12 (3)2.963 (2)172 (2)
C6—H6···N40.974 (19)2.39 (2)2.761 (3)101.7 (15)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N3—H3n⋯N1i0.85 (3)2.12 (3)2.963 (2)172 (2)

Symmetry code: (i) .

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