| Literature DB >> 21581481 |
Wen-Dong Song1, Shi-Jie Li, Pei-Wen Qin, Shi-Wei Hu.
Abstract
In the crystal structure of the title complex, [Tb(C(6)H(4)NO(2))(C(2)O(4))(H(2)O)(2)](n), the Tb(III) cation is coordinated by four O atoms from two oxalate ligands, two O atoms from two isonicotinate ligands and two O atoms from water mol-ecules within a distorted square-anti-prismatic coordination. The Tb(III) cation, the isonicotinate anion and the two crystallographically independent water mol-ecules occupy general positions, whereas one of the two crystallographically independent oxalate anions is located on a center of inversion, and the second oxalate anion is located on a twofold rotation axis. The Tb(III) cations are linked by the oxalate and isonicotinate anions into layers, which are connected via inter-molecular hydrogen-bonding and π-π stacking [with centroid-to-centroid distances of 3.509 (2) and 3.343 (3) Å] inter-actions into a three-dimensional network.Entities:
Year: 2008 PMID: 21581481 PMCID: PMC2968018 DOI: 10.1107/S1600536808040518
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Tb(C6H4NO2)(C2O4)(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 8000 reflections |
| θ = 1.7–26.0° | |
| µ = 6.72 mm−1 | |
| β = 112.407 (2)° | Block, colorless |
| 0.36 × 0.30 × 0.24 mm | |
| Bruker APEXII area-detector diffractometer | 1906 independent reflections |
| Radiation source: fine-focus sealed tube | 1618 reflections with |
| graphite | |
| φ and ω scans | θmax = 25.2°, θmin = 2.4° |
| Absorption correction: multi-scan ( | |
| 7256 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1906 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.52 e Å−3 |
| 6 restraints | Δρmin = −0.88 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Tb1 | 0.323989 (12) | 0.96756 (2) | 0.074846 (17) | 0.01399 (9) | |
| O1 | 0.46185 (19) | 1.0185 (4) | 0.1051 (3) | 0.0274 (9) | |
| O2 | 0.3030 (2) | 1.1497 (3) | −0.0596 (3) | 0.0229 (8) | |
| O5 | 0.3693 (2) | 0.7501 (4) | 0.1067 (3) | 0.0331 (9) | |
| C1 | 0.2585 (3) | 1.2447 (5) | −0.0542 (4) | 0.0172 (11) | |
| C2 | 0.5146 (3) | 1.0111 (5) | 0.2013 (4) | 0.0172 (11) | |
| C7 | 0.5237 (3) | 0.6498 (6) | 0.1361 (4) | 0.0231 (12) | |
| H7 | 0.5190 | 0.7432 | 0.1348 | 0.028* | |
| C8 | 0.3727 (3) | 0.6297 (6) | 0.0808 (4) | 0.0196 (11) | |
| C3 | 0.4558 (3) | 0.5688 (5) | 0.1108 (3) | 0.0163 (11) | |
| C6 | 0.5989 (3) | 0.5889 (7) | 0.1636 (4) | 0.0281 (13) | |
| H6 | 0.6444 | 0.6439 | 0.1807 | 0.034* | |
| C4 | 0.4671 (3) | 0.4306 (5) | 0.1135 (4) | 0.0220 (12) | |
| H4 | 0.4228 | 0.3731 | 0.0961 | 0.026* | |
| C5 | 0.54429 (8) | 0.37835 (15) | 0.14206 (11) | 0.0281 (13) | |
| H5 | 0.5508 | 0.2853 | 0.1440 | 0.034* | |
| N1 | 0.60972 (8) | 0.45622 (15) | 0.16691 (11) | 0.0279 (11) | |
| O3 | 0.59033 (8) | 1.00505 (15) | 0.22872 (11) | 0.0229 (8) | |
| O4 | 0.22609 (8) | 1.33232 (15) | −0.12763 (11) | 0.0232 (8) | |
| O6 | 0.31250 (8) | 0.55572 (15) | 0.03267 (11) | 0.0301 (9) | |
| O1W | 0.25866 (8) | 0.87408 (15) | 0.19413 (11) | 0.0208 (8) | |
| H1W | 0.2122 | 0.9030 | 0.1852 | 0.031* | |
| H2W | 0.2833 | 0.8622 | 0.2630 | 0.031* | |
| O2W | 0.33025 (8) | 0.88114 (15) | −0.09693 (11) | 0.0286 (9) | |
| H3W | 0.3550 | 0.9157 | −0.1341 | 0.043* | |
| H4W | 0.2966 | 0.8264 | −0.1394 | 0.043* |
| Tb1 | 0.01048 (13) | 0.01587 (15) | 0.01480 (12) | 0.00208 (11) | 0.00389 (9) | 0.00099 (11) |
| O1 | 0.0140 (17) | 0.047 (3) | 0.0180 (17) | −0.0045 (17) | 0.0027 (14) | 0.0043 (17) |
| O2 | 0.0294 (19) | 0.023 (2) | 0.0202 (17) | 0.0082 (17) | 0.0143 (15) | 0.0022 (16) |
| O5 | 0.039 (2) | 0.028 (2) | 0.039 (2) | 0.017 (2) | 0.0227 (19) | 0.0083 (19) |
| C1 | 0.013 (2) | 0.019 (3) | 0.021 (3) | 0.001 (2) | 0.007 (2) | 0.001 (2) |
| C2 | 0.009 (2) | 0.017 (3) | 0.021 (2) | −0.002 (2) | 0.002 (2) | 0.000 (2) |
| C7 | 0.019 (3) | 0.026 (3) | 0.022 (3) | −0.004 (2) | 0.005 (2) | −0.009 (2) |
| C8 | 0.020 (3) | 0.030 (3) | 0.012 (2) | 0.008 (2) | 0.008 (2) | 0.010 (2) |
| C3 | 0.017 (2) | 0.024 (3) | 0.007 (2) | 0.005 (2) | 0.0035 (18) | −0.002 (2) |
| C6 | 0.016 (3) | 0.047 (4) | 0.022 (3) | −0.004 (3) | 0.008 (2) | −0.006 (3) |
| C4 | 0.020 (3) | 0.022 (3) | 0.023 (3) | −0.002 (2) | 0.007 (2) | −0.004 (2) |
| C5 | 0.028 (3) | 0.026 (3) | 0.034 (3) | 0.013 (3) | 0.016 (2) | 0.007 (3) |
| N1 | 0.015 (2) | 0.046 (4) | 0.024 (2) | 0.007 (2) | 0.0081 (18) | 0.003 (2) |
| O3 | 0.0175 (18) | 0.033 (2) | 0.0197 (17) | −0.0024 (16) | 0.0089 (14) | 0.0018 (15) |
| O4 | 0.032 (2) | 0.020 (2) | 0.0195 (17) | 0.0121 (17) | 0.0116 (15) | 0.0052 (16) |
| O6 | 0.0095 (17) | 0.050 (3) | 0.0259 (18) | 0.0005 (18) | 0.0013 (14) | 0.0006 (18) |
| O1W | 0.0149 (16) | 0.028 (2) | 0.0201 (16) | 0.0064 (16) | 0.0076 (14) | 0.0074 (16) |
| O2W | 0.040 (2) | 0.028 (2) | 0.0232 (18) | −0.0068 (19) | 0.0179 (17) | −0.0074 (17) |
| Tb1—O5 | 2.285 (4) | C7—H7 | 0.9300 |
| Tb1—O6i | 2.3055 (14) | C8—O6 | 1.251 (5) |
| Tb1—O4ii | 2.3814 (14) | C8—C3 | 1.505 (6) |
| Tb1—O1 | 2.386 (3) | C3—C4 | 1.385 (7) |
| Tb1—O2W | 2.4286 (13) | C6—N1 | 1.329 (7) |
| Tb1—O2 | 2.439 (3) | C6—H6 | 0.9300 |
| Tb1—O1W | 2.4444 (13) | C4—C5 | 1.380 (5) |
| Tb1—O3iii | 2.4476 (13) | C4—H4 | 0.9300 |
| O1—C2 | 1.245 (6) | C5—N1 | 1.3306 |
| O2—C1 | 1.251 (5) | C5—H5 | 0.9300 |
| O5—C8 | 1.249 (6) | O3—Tb1iii | 2.4476 (13) |
| C1—O4 | 1.255 (5) | O4—Tb1ii | 2.3814 (14) |
| C1—C1ii | 1.549 (9) | O6—Tb1i | 2.3055 (14) |
| C2—O3 | 1.257 (5) | O1W—H1W | 0.8400 |
| C2—C2iii | 1.537 (9) | O1W—H2W | 0.8400 |
| C7—C3 | 1.382 (7) | O2W—H3W | 0.8400 |
| C7—C6 | 1.387 (7) | O2W—H4W | 0.8400 |
| O5—Tb1—O6i | 103.43 (11) | O4—C1—C1ii | 116.8 (5) |
| O5—Tb1—O4ii | 151.65 (9) | O1—C2—O3 | 127.1 (4) |
| O6i—Tb1—O4ii | 80.4 | O1—C2—C2iii | 117.5 (5) |
| O5—Tb1—O1 | 84.30 (13) | O3—C2—C2iii | 115.4 (5) |
| O6i—Tb1—O1 | 154.26 (9) | C3—C7—C6 | 118.6 (5) |
| O4ii—Tb1—O1 | 104.49 (10) | C3—C7—H7 | 120.7 |
| O5—Tb1—O2W | 72.32 (10) | C6—C7—H7 | 120.7 |
| O6i—Tb1—O2W | 79.4 | O5—C8—O6 | 125.1 (4) |
| O4ii—Tb1—O2W | 135.3 | O5—C8—C3 | 117.3 (5) |
| O1—Tb1—O2W | 79.74 (9) | O6—C8—C3 | 117.6 (4) |
| O5—Tb1—O2 | 140.94 (11) | C7—C3—C4 | 117.7 (4) |
| O6i—Tb1—O2 | 78.63 (9) | C7—C3—C8 | 120.8 (5) |
| O4ii—Tb1—O2 | 67.37 (8) | C4—C3—C8 | 121.5 (4) |
| O1—Tb1—O2 | 80.13 (11) | N1—C6—C7 | 123.6 (5) |
| O2W—Tb1—O2 | 69.77 (8) | N1—C6—H6 | 118.2 |
| O5—Tb1—O1W | 75.35 (9) | C7—C6—H6 | 118.2 |
| O6i—Tb1—O1W | 72.49 (5) | C5—C4—C3 | 120.0 (4) |
| O4ii—Tb1—O1W | 79.29 (5) | C5—C4—H4 | 120.0 |
| O1—Tb1—O1W | 133.11 (8) | C3—C4—H4 | 120.0 |
| O2W—Tb1—O1W | 130.20 (6) | N1—C5—C4 | 122.4 (2) |
| O2—Tb1—O1W | 138.86 (8) | N1—C5—H5 | 118.8 |
| O5—Tb1—O3iii | 85.32 (10) | C4—C5—H5 | 118.8 |
| O6i—Tb1—O3iii | 137.68 (6) | C6—N1—C5 | 117.7 (2) |
| O4ii—Tb1—O3iii | 74.2 | C2—O3—Tb1iii | 118.5 (2) |
| O1—Tb1—O3iii | 66.61 (8) | C1—O4—Tb1ii | 118.2 (2) |
| O2W—Tb1—O3iii | 141.3 | C8—O6—Tb1i | 149.8 (3) |
| O2—Tb1—O3iii | 119.75 (9) | Tb1—O1W—H1W | 117.6 |
| O1W—Tb1—O3iii | 69.9 | Tb1—O1W—H2W | 123.0 |
| C2—O1—Tb1 | 119.2 (3) | H1W—O1W—H2W | 106.4 |
| C1—O2—Tb1 | 116.5 (3) | Tb1—O2W—H3W | 126.8 |
| C8—O5—Tb1 | 154.8 (3) | Tb1—O2W—H4W | 124.0 |
| O2—C1—O4 | 126.6 (4) | H3W—O2W—H4W | 106.6 |
| O2—C1—C1ii | 116.6 (5) |
| H··· | ||||
| O1W—H1W···N1iv | 0.84 | 1.83 | 2.665 | 177 |
| O1W—H2W···O2v | 0.84 | 2.19 | 2.992 (3) | 159 |
| O2W—H3W···O3vi | 0.84 | 2.00 | 2.835 (3) | 177 |
| O2W—H4W···O1Wi | 0.84 | 2.21 | 2.998 (3) | 156 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.84 | 1.83 | 2.665 | 177 |
| O1 | 0.84 | 2.19 | 2.992 (3) | 159 |
| O2 | 0.84 | 2.00 | 2.835 (3) | 177 |
| O2 | 0.84 | 2.21 | 2.998 (3) | 156 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .