| Literature DB >> 21581414 |
Koji Kubono1, Yuki Tsuno, Keita Tani, Kunihiko Yokoi.
Abstract
The titile compound, C(18)H(20)Cl(2)N(2)O(2), crystallizes as a monoclinic form in the space group P2(1)/n, with Z' = 1/2. It is polymorphic with the previously reported orthorhombic form [Kubono, Tsuno, Tani & Yokoi (2008). Acta Cryst. E64, o2309]. In the present polymorph, the mol-ecule lies on a crystallographic inversion centre at the piperazine ring centroid. An intra-molecular O-H⋯N hydrogen bond forms an S(6) ring motif. Inter-molecular C-H⋯O hydrogen bonding generates a C(5) chain motif propagating along the b axis, forming sheets parallel to (02) with a first-level graph set S(6)C(5)R(6) (6)(34).Entities:
Year: 2008 PMID: 21581414 PMCID: PMC2959908 DOI: 10.1107/S1600536808038750
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H20Cl2N2O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 25 reflections |
| θ = 15.2–17.3º | |
| µ = 0.39 mm−1 | |
| β = 96.45 (2)º | Column, colorless |
| 0.35 × 0.15 × 0.15 mm | |
| Rigaku AFC-7R diffractometer | θmax = 27.5º |
| ω–2θ scans | |
| Absorption correction: none | |
| 2462 measured reflections | |
| 1994 independent reflections | 3 standard reflections |
| 1316 reflections with | every 150 reflections |
| intensity decay: 0.4% |
| Refinement on | All H-atom parameters refined |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.54 e Å−3 | |
| 1994 reflections | Δρmin = −0.52 e Å−3 |
| 119 parameters | Extinction correction: none |
| Refinement. Refinement was performed using all reflections. The weighted |
| Cl1 | 0.70334 (4) | 0.71539 (6) | 0.65673 (12) | 0.0627 (2) | |
| O1 | 0.59890 (10) | 0.28682 (15) | 1.2938 (2) | 0.0497 (4) | |
| N1 | 0.50843 (9) | 0.15177 (16) | 0.9674 (2) | 0.0354 (3) | |
| C1 | 0.62416 (12) | 0.3779 (2) | 1.1357 (3) | 0.0378 (4) | |
| C2 | 0.69309 (12) | 0.4691 (2) | 1.1990 (3) | 0.0461 (5) | |
| C3 | 0.71835 (13) | 0.5701 (2) | 1.0514 (4) | 0.0473 (5) | |
| C4 | 0.67524 (12) | 0.5798 (2) | 0.8384 (3) | 0.0436 (5) | |
| C5 | 0.60947 (12) | 0.4866 (2) | 0.7692 (3) | 0.0385 (5) | |
| C6 | 0.58325 (11) | 0.38356 (19) | 0.9157 (3) | 0.0337 (4) | |
| C7 | 0.50735 (12) | 0.28755 (19) | 0.8387 (3) | 0.0390 (5) | |
| C8 | 0.57289 (12) | 0.0497 (2) | 0.9043 (4) | 0.0417 (5) | |
| C9 | 0.57559 (11) | −0.0814 (2) | 1.0552 (4) | 0.0422 (5) | |
| H1 | 0.5656 | 0.2261 | 1.2298 | 0.059* | |
| H2 | 0.7224 | 0.4609 | 1.3462 | 0.054* | |
| H3 | 0.7650 | 0.6328 | 1.0950 | 0.056* | |
| H4 | 0.5819 | 0.4926 | 0.6198 | 0.047* | |
| H5 | 0.5090 | 0.2653 | 0.6841 | 0.046* | |
| H6 | 0.4562 | 0.3383 | 0.8565 | 0.046* | |
| H7 | 0.5580 | 0.0195 | 0.7531 | 0.051* | |
| H8 | 0.6272 | 0.0954 | 0.9174 | 0.051* | |
| H9 | 0.6173 | −0.1479 | 1.0157 | 0.051* | |
| H10 | 0.5898 | −0.0510 | 1.2065 | 0.051* |
| Cl1 | 0.0679 (4) | 0.0428 (3) | 0.0828 (5) | −0.0173 (2) | 0.0324 (3) | −0.0034 (2) |
| O1 | 0.0618 (9) | 0.0389 (8) | 0.0467 (9) | −0.0050 (6) | −0.0016 (7) | −0.0006 (6) |
| N1 | 0.0266 (6) | 0.0258 (6) | 0.0545 (10) | −0.0007 (5) | 0.0077 (6) | −0.0043 (6) |
| C1 | 0.0365 (9) | 0.0272 (8) | 0.0493 (11) | 0.0049 (7) | 0.0029 (8) | −0.0052 (8) |
| C2 | 0.0383 (10) | 0.0387 (10) | 0.0582 (13) | 0.0016 (8) | −0.0081 (9) | −0.0107 (9) |
| C3 | 0.0323 (9) | 0.0367 (9) | 0.0727 (15) | −0.0036 (8) | 0.0044 (9) | −0.0146 (10) |
| C4 | 0.0363 (9) | 0.0299 (9) | 0.0670 (14) | −0.0038 (7) | 0.0158 (9) | −0.0074 (8) |
| C5 | 0.0372 (9) | 0.0304 (9) | 0.0481 (11) | −0.0024 (7) | 0.0057 (8) | −0.0045 (8) |
| C6 | 0.0295 (8) | 0.0255 (7) | 0.0463 (10) | 0.0007 (7) | 0.0043 (7) | −0.0059 (7) |
| C7 | 0.0349 (9) | 0.0302 (9) | 0.0510 (12) | −0.0037 (7) | 0.0002 (8) | −0.0011 (8) |
| C8 | 0.0314 (8) | 0.0295 (9) | 0.0665 (13) | −0.0012 (7) | 0.0153 (8) | −0.0067 (8) |
| C9 | 0.0286 (8) | 0.0293 (8) | 0.0689 (13) | −0.0005 (7) | 0.0062 (8) | −0.0048 (9) |
| Cl1—C4 | 1.750 (2) | C8—C9 | 1.510 (2) |
| O1—C1 | 1.360 (2) | O1—H1 | 0.832 |
| N1—C7 | 1.474 (2) | C2—H2 | 0.950 |
| N1—C8 | 1.468 (2) | C3—H3 | 0.950 |
| N1—C9i | 1.468 (2) | C5—H4 | 0.950 |
| C1—C2 | 1.395 (2) | C7—H5 | 0.950 |
| C1—C6 | 1.399 (2) | C7—H6 | 0.950 |
| C2—C3 | 1.375 (3) | C8—H7 | 0.950 |
| C3—C4 | 1.377 (3) | C8—H8 | 0.950 |
| C4—C5 | 1.376 (2) | C9—H9 | 0.950 |
| C5—C6 | 1.389 (2) | C9—H10 | 0.950 |
| C6—C7 | 1.520 (2) | ||
| C7—N1—C8 | 112.58 (15) | C3—C2—H2 | 120.2 |
| C7—N1—C9i | 111.96 (14) | C2—C3—H3 | 120.7 |
| C8—N1—C9i | 109.43 (14) | C4—C3—H3 | 120.0 |
| O1—C1—C2 | 117.87 (17) | C4—C5—H4 | 119.7 |
| O1—C1—C6 | 122.46 (16) | C6—C5—H4 | 119.7 |
| C2—C1—C6 | 119.67 (18) | N1—C7—H5 | 108.8 |
| C1—C2—C3 | 120.75 (19) | N1—C7—H6 | 108.9 |
| C2—C3—C4 | 119.27 (18) | C6—C7—H5 | 108.3 |
| Cl1—C4—C3 | 119.17 (14) | C6—C7—H6 | 109.0 |
| Cl1—C4—C5 | 119.92 (16) | H5—C7—H6 | 109.5 |
| C3—C4—C5 | 120.90 (19) | N1—C8—H7 | 109.3 |
| C4—C5—C6 | 120.60 (18) | N1—C8—H8 | 109.5 |
| C1—C6—C5 | 118.68 (16) | C9—C8—H7 | 108.6 |
| C1—C6—C7 | 121.77 (17) | C9—C8—H8 | 110.1 |
| C5—C6—C7 | 119.41 (16) | H7—C8—H8 | 109.5 |
| N1—C7—C6 | 112.28 (15) | N1i—C9—H9 | 109.3 |
| N1—C8—C9 | 109.81 (17) | N1i—C9—H10 | 109.5 |
| N1i—C9—C8 | 109.75 (15) | C8—C9—H9 | 110.4 |
| C1—O1—H1 | 108.6 | C8—C9—H10 | 108.5 |
| C1—C2—H2 | 119.0 | H9—C9—H10 | 109.5 |
| C7—N1—C8—C9 | 175.34 (15) | C6—C1—C2—C3 | 3.6 (3) |
| C8—N1—C7—C6 | −74.1 (2) | C1—C2—C3—C4 | −0.6 (3) |
| C7—N1—C9i—C8i | −175.02 (17) | C2—C3—C4—Cl1 | 176.21 (16) |
| C9i—N1—C7—C6 | 162.11 (16) | C2—C3—C4—C5 | −2.3 (3) |
| C8—N1—C9i—C8i | 59.4 (2) | Cl1—C4—C5—C6 | −176.38 (15) |
| C9i—N1—C8—C9 | −59.5 (2) | C3—C4—C5—C6 | 2.1 (3) |
| O1—C1—C2—C3 | −175.83 (18) | C4—C5—C6—C1 | 0.9 (2) |
| O1—C1—C6—C5 | 175.67 (17) | C4—C5—C6—C7 | 176.70 (17) |
| O1—C1—C6—C7 | 0.0 (2) | C1—C6—C7—N1 | −27.3 (2) |
| C2—C1—C6—C5 | −3.8 (2) | C5—C6—C7—N1 | 157.10 (17) |
| C2—C1—C6—C7 | −179.42 (17) | N1—C8—C9—N1i | 59.7 (2) |
| H··· | ||||
| O1—H1···N1 | 0.83 | 1.85 | 2.604 (2) | 150 |
| C3—H3···O1ii | 0.95 | 2.60 | 3.547 (2) | 175 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯N1 | 0.83 | 1.85 | 2.604 (2) | 150 |
| C3—H3⋯O1i | 0.95 | 2.60 | 3.547 (2) | 175 |
Symmetry code: (i) .