Literature DB >> 21581315

Ammonium 1-ammonio-ethane-1,1-diylbis(hydrogenphospho-nate) dihydrate.

V V Bon1, A V Dudko, A N Kozachkova, V I Pekhnyo.   

Abstract

The title compound, NH(4) (+)·C(2)H(8)NO(6)P(2) (-)·2H(2)O, was obtained by the reaction between 1-amino-ethane-1,1-diyldiphospho-nic acid and ammonium hydroxide (1:1) in an aqueous solution. The asymmetric unit contains one anion with two H atoms transferred from the phospho-nic acid groups to the amino group of the anion and to an ammonia mol-ecule, giving an ammonium cation. The structure displays N-H⋯O and O-H⋯O hydrogen bonding, which creates a three-dimensional network.

Entities:  

Year:  2008        PMID: 21581315      PMCID: PMC2960039          DOI: 10.1107/S1600536808037045

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

Diphospho­nic acids are efficient drugs for the prevention of calcification and the inhibition bone resorption (Tromelin et al., 1986 ▶, Matczak-Jon & Videnova-Adrabinska, 2005 ▶) and are used in the treatment of Pagets disease, osteoporosis and tumoral osteolysis (Szabo et al., 2002 ▶). For related structures, see: Bruckmann et al. (1999 ▶); Olive et al. (2000 ▶); Coiro et al. (1989 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

NH4 +·C2H8NO6P2 −·2H2O M = 258.11 Monoclinic, a = 8.8922 (3) Å b = 6.9390 (3) Å c = 18.9576 (8) Å β = 117.957 (2)° V = 1033.23 (7) Å3 Z = 4 Mo Kα radiation μ = 0.45 mm−1 T = 173 (2) K 0.23 × 0.19 × 0.09 mm

Data collection

Bruker SMART APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2005 ▶) T min = 0.906, T max = 0.963 14152 measured reflections 2126 independent reflections 1710 reflections with I > 2σ(I) R int = 0.057

Refinement

R[F 2 > 2σ(F 2)] = 0.033 wR(F 2) = 0.074 S = 1.05 2126 reflections 180 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.50 e Å−3 Δρmin = −0.42 e Å−3 Data collection: APEX2 (Bruker, 2005 ▶); cell refinement: SAINT (Bruker, 2005 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808037045/rk2118sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808037045/rk2118Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
H4N+·C2H8NO6P2·2H2OF000 = 544
Mr = 258.11Dx = 1.659 Mg m3
Monoclinic, P21/cMelting point: 511 K
Hall symbol: -P 2ybcMo Kα radiation λ = 0.71073 Å
a = 8.8922 (3) ÅCell parameters from 4102 reflections
b = 6.9390 (3) Åθ = 2.4–26.4º
c = 18.9576 (8) ŵ = 0.45 mm1
β = 117.957 (2)ºT = 173 (2) K
V = 1033.23 (7) Å3Needle, colourless
Z = 40.23 × 0.19 × 0.09 mm
Bruker SMART APEXII CCD area-detector diffractometer2126 independent reflections
Radiation source: Fine-focus sealed tube1710 reflections with I > 2σ(I)
Monochromator: GraphiteRint = 0.057
T = 173(2) Kθmax = 26.5º
φ and ω scansθmin = 2.4º
Absorption correction: multi-scan(SADABS; Bruker, 2005)h = −11→11
Tmin = 0.906, Tmax = 0.963k = −8→8
14152 measured reflectionsl = −23→23
Refinement on F2Secondary atom site location: Difmap
Least-squares matrix: FullHydrogen site location: Geom
R[F2 > 2σ(F2)] = 0.033H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.074  w = 1/[σ2(Fo2) + (0.0326P)2 + 0.4969P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
2126 reflectionsΔρmax = 0.50 e Å3
180 parametersΔρmin = −0.42 e Å3
2 restraintsExtinction correction: None
Primary atom site location: Direct
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
P10.45684 (7)0.78215 (7)0.83905 (3)0.00967 (14)
P20.75545 (7)0.49061 (7)0.90274 (3)0.00998 (14)
C10.6842 (3)0.7385 (3)0.86839 (12)0.0102 (4)
C20.7977 (3)0.8851 (3)0.93146 (13)0.0151 (5)
H2A0.91720.86040.94600.023*
H2B0.78160.87300.97900.023*
H2C0.76681.01570.90970.023*
N10.7091 (2)0.7652 (3)0.79539 (11)0.0110 (4)
N20.4118 (3)0.2940 (3)0.92879 (12)0.0156 (4)
O10.41873 (18)0.6941 (2)0.90108 (8)0.0136 (3)
O20.42601 (18)0.99358 (19)0.82470 (8)0.0138 (3)
O30.35764 (18)0.6661 (2)0.75879 (9)0.0118 (3)
O40.61946 (17)0.3541 (2)0.84970 (8)0.0127 (3)
O50.92422 (18)0.4672 (2)0.90282 (8)0.0137 (3)
O60.7742 (2)0.4803 (2)0.98869 (9)0.0142 (3)
H3O0.366 (3)0.724 (4)0.7255 (16)0.033 (8)*
H6O0.873 (4)0.492 (4)1.0228 (18)0.044 (9)*
H11N0.653 (3)0.669 (4)0.7568 (15)0.022 (6)*
H12N0.822 (3)0.761 (3)0.8110 (14)0.016 (6)*
H13N0.672 (3)0.878 (4)0.7751 (14)0.019 (7)*
H21N0.303 (4)0.265 (4)0.9075 (17)0.036 (8)*
H22N0.453 (3)0.222 (4)0.9061 (16)0.028 (8)*
H23N0.418 (3)0.422 (5)0.9160 (17)0.039 (8)*
H24N0.463 (3)0.275 (3)0.9819 (15)0.013 (6)*
O70.0562 (2)0.2189 (3)0.83327 (12)0.0225 (4)
O8−0.0558 (2)0.3200 (3)0.67241 (11)0.0235 (4)
H71O0.019 (4)0.249 (4)0.786 (2)0.042 (9)*
H72O0.004 (3)0.278 (4)0.8504 (16)0.025 (8)*
H81O−0.145 (3)0.279 (4)0.6455 (15)0.034 (9)*
H82O−0.064 (4)0.431 (3)0.668 (2)0.063 (12)*
U11U22U33U12U13U23
P10.0092 (3)0.0081 (3)0.0112 (3)0.0005 (2)0.0044 (2)0.0006 (2)
P20.0099 (3)0.0091 (3)0.0099 (3)0.0006 (2)0.0038 (2)0.0007 (2)
C10.0101 (10)0.0095 (10)0.0110 (10)−0.0006 (8)0.0049 (8)0.0002 (8)
C20.0152 (11)0.0123 (11)0.0167 (11)−0.0028 (9)0.0065 (9)−0.0034 (9)
N10.0104 (10)0.0097 (9)0.0125 (9)0.0006 (8)0.0051 (8)0.0019 (8)
N20.0169 (11)0.0169 (11)0.0144 (11)−0.0005 (9)0.0084 (9)−0.0014 (8)
O10.0138 (8)0.0141 (8)0.0144 (8)0.0004 (6)0.0078 (6)0.0025 (6)
O20.0155 (8)0.0104 (7)0.0152 (7)0.0010 (6)0.0069 (6)0.0004 (6)
O30.0130 (8)0.0103 (7)0.0108 (7)−0.0015 (6)0.0044 (6)0.0010 (6)
O40.0131 (8)0.0100 (7)0.0142 (7)−0.0009 (6)0.0058 (6)−0.0007 (6)
O50.0117 (8)0.0144 (8)0.0141 (7)0.0018 (6)0.0052 (6)−0.0001 (6)
O60.0107 (8)0.0194 (8)0.0114 (7)0.0008 (6)0.0042 (7)0.0014 (6)
O70.0173 (9)0.0237 (9)0.0262 (10)0.0030 (7)0.0100 (8)−0.0056 (8)
O80.0164 (10)0.0216 (10)0.0324 (10)0.0009 (8)0.0115 (9)−0.0013 (8)
P1—O21.4939 (14)N1—H11N0.94 (3)
P1—O11.4982 (14)N1—H12N0.90 (3)
P1—O31.5760 (15)N1—H13N0.87 (3)
P1—C11.853 (2)N2—H21N0.88 (3)
P2—O41.4933 (15)N2—H22N0.85 (3)
P2—O51.5088 (15)N2—H23N0.93 (3)
P2—O61.5598 (15)N2—H24N0.90 (2)
P2—C11.843 (2)O3—H3O0.78 (3)
C1—N11.512 (3)O6—H6O0.81 (3)
C1—C21.534 (3)O7—H71O0.83 (3)
C2—H2A0.9800O7—H72O0.80 (3)
C2—H2B0.9800O8—H81O0.768 (17)
C2—H2C0.9800O8—H82O0.775 (18)
O2—P1—O1116.99 (8)H2A—C2—H2B109.5
O2—P1—O3110.75 (8)C1—C2—H2C109.5
O1—P1—O3108.61 (9)H2A—C2—H2C109.5
O2—P1—C1107.25 (9)H2B—C2—H2C109.5
O1—P1—C1108.31 (9)C1—N1—H11N111.7 (15)
O3—P1—C1104.13 (9)C1—N1—H12N108.2 (15)
O4—P2—O5115.05 (8)H11N—N1—H12N110 (2)
O4—P2—O6109.31 (8)C1—N1—H13N109.0 (15)
O5—P2—O6112.01 (8)H11N—N1—H13N110 (2)
O4—P2—C1108.55 (9)H12N—N1—H13N108 (2)
O5—P2—C1106.13 (9)H21N—N2—H22N106 (3)
O6—P2—C1105.23 (9)H21N—N2—H23N107 (2)
N1—C1—C2107.87 (16)H22N—N2—H23N110 (3)
N1—C1—P2105.33 (13)H21N—N2—H24N110 (2)
C2—C1—P2110.63 (14)H22N—N2—H24N112 (2)
N1—C1—P1108.22 (14)H23N—N2—H24N112 (2)
C2—C1—P1110.60 (14)P1—O3—H3O107 (2)
P2—C1—P1113.86 (10)P2—O6—H6O112 (2)
C1—C2—H2A109.5H71O—O7—H72O108 (3)
C1—C2—H2B109.5H81O—O8—H82O106 (3)
O4—P2—C1—N1−77.19 (14)O2—P1—C1—N1−71.57 (14)
O5—P2—C1—N147.00 (15)O1—P1—C1—N1161.33 (13)
O6—P2—C1—N1165.88 (13)O3—P1—C1—N145.86 (15)
O4—P2—C1—C2166.50 (13)O2—P1—C1—C246.40 (16)
O5—P2—C1—C2−69.31 (15)O1—P1—C1—C2−80.71 (15)
O6—P2—C1—C249.58 (16)O3—P1—C1—C2163.82 (14)
O4—P2—C1—P141.22 (13)O2—P1—C1—P2171.69 (10)
O5—P2—C1—P1165.41 (10)O1—P1—C1—P244.58 (13)
O6—P2—C1—P1−75.71 (12)O3—P1—C1—P2−70.88 (12)
D—H···AD—HH···AD···AD—H···A
O3—H3O···O4i0.78 (3)1.74 (3)2.523 (2)179 (3)
O6—H6O···O5ii0.81 (3)1.71 (3)2.526 (2)175 (3)
N1—H11N···O2iii0.94 (3)1.83 (3)2.759 (2)169 (2)
N1—H12N···O8i0.90 (3)2.00 (3)2.873 (3)164 (2)
N1—H13N···O3i0.87 (3)2.08 (3)2.928 (2)167 (2)
N2—H21N···O70.88 (3)2.00 (3)2.860 (3)165 (3)
N2—H22N···O2iv0.85 (3)2.14 (3)2.914 (3)151 (2)
N2—H23N···O10.93 (3)1.91 (3)2.832 (3)171 (3)
N2—H24N···O1v0.90 (2)1.97 (3)2.850 (3)165 (2)
O7—H71O···O80.83 (3)1.99 (3)2.817 (3)177 (3)
O7—H72O···O5vi0.80 (3)1.97 (3)2.745 (2)165 (3)
O8—H81O···O1vii0.768 (17)2.244 (19)2.984 (2)162 (3)
O8—H82O···O7viii0.775 (18)1.999 (19)2.770 (3)173 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3O⋯O4i0.78 (3)1.74 (3)2.523 (2)179 (3)
O6—H6O⋯O5ii0.81 (3)1.71 (3)2.526 (2)175 (3)
N1—H11N⋯O2iii0.94 (3)1.83 (3)2.759 (2)169 (2)
N1—H12N⋯O8i0.90 (3)2.00 (3)2.873 (3)164 (2)
N1—H13N⋯O3i0.87 (3)2.08 (3)2.928 (2)167 (2)
N2—H21N⋯O70.88 (3)2.00 (3)2.860 (3)165 (3)
N2—H22N⋯O2iv0.85 (3)2.14 (3)2.914 (3)151 (2)
N2—H23N⋯O10.93 (3)1.91 (3)2.832 (3)171 (3)
N2—H24N⋯O1v0.90 (2)1.97 (3)2.850 (3)165 (2)
O7—H71O⋯O80.83 (3)1.99 (3)2.817 (3)177 (3)
O7—H72O⋯O5vi0.80 (3)1.97 (3)2.745 (2)165 (3)
O8—H81O⋯O1vii0.768 (17)2.244 (19)2.984 (2)162 (3)
O8—H82O⋯O7viii0.775 (18)1.999 (19)2.770 (3)173 (4)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .

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