Literature DB >> 21581273

3-Phenyl-1-[2-(3-phenyl-isoquinolin-1-yl)-diselan-yl]isoquinoline.

Venkatesha R Hathwar, K Prabakaran, R Subashini, P Manivel, F Nawaz Khan.   

Abstract

The complete molecule of the title compound, C(30)H(20)N(2)Se(2), is generated by a crystallographic inversion centre at the mid-point of the Se-Se bond. The dihedral angle between the isoquinoline-1-selenol group and the phenyl ring is 14.92 (2)°. The herringbone-like packing of the structure is supported by inter-molecular π-π stacking inter-actions with a shortest perpendicular distance between isoquinoline groups of 3.514 Å; the slippage between these ring systems is 0.972 Å, and the distance between the centroids of the six-membered carbon rings is 3.645 (3) Å.

Entities:  

Year:  2008        PMID: 21581273      PMCID: PMC2959858          DOI: 10.1107/S160053680803609X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological properties of organoselenium compounds, see: Mugesh & Singh (2000 ▶). For chemopreventive agents in human cancer therapy, see: Sugie et al. (2000 ▶).

Experimental

Crystal data

C30H20N2Se2 M = 566.40 Monoclinic, a = 11.2441 (17) Å b = 17.559 (3) Å c = 13.248 (3) Å β = 115.082 (2)° V = 2369.0 (8) Å3 Z = 4 Mo Kα radiation μ = 3.14 mm−1 T = 290 (2) K 0.20 × 0.14 × 0.11 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.585, T max = 0.703 8668 measured reflections 2207 independent reflections 1516 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.102 S = 1.00 2207 reflections 158 parameters H-atom parameters constrained Δρmax = 0.66 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and CAMERON (Watkin et al., 1993 ▶); software used to prepare material for publication: PLATON (Spek, 2003 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053680803609X/si2124sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680803609X/si2124Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C30H20N2Se2F000 = 1128
Mr = 566.40Dx = 1.588 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 948 reflections
a = 11.2441 (17) Åθ = 2.3–24.6º
b = 17.559 (3) ŵ = 3.14 mm1
c = 13.248 (3) ÅT = 290 (2) K
β = 115.082 (2)ºBlock, brown
V = 2369.0 (8) Å30.20 × 0.14 × 0.11 mm
Z = 4
Bruker SMART CCD area-detector diffractometer2207 independent reflections
Radiation source: fine-focus sealed tube1516 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.040
T = 290(2) Kθmax = 25.5º
φ and ω scansθmin = 2.3º
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.585, Tmax = 0.703k = −21→19
8668 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.043H-atom parameters constrained
wR(F2) = 0.102  w = 1/[σ2(Fo2) + (0.0594P)2] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
2207 reflectionsΔρmax = 0.66 e Å3
158 parametersΔρmin = −0.22 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Se10.85678 (4)0.23078 (2)1.05937 (3)0.0658 (2)
N10.8556 (3)0.35522 (16)0.9293 (2)0.0532 (7)
C10.9346 (4)0.3092 (2)1.0051 (3)0.0546 (9)
C20.9077 (3)0.41108 (19)0.8880 (3)0.0509 (9)
C31.0405 (4)0.4174 (2)0.9231 (3)0.0590 (10)
H31.07410.45500.89290.071*
C41.2651 (4)0.3718 (3)1.0436 (3)0.0732 (12)
H41.30180.40881.01530.088*
C51.3442 (4)0.3224 (3)1.1219 (4)0.0837 (13)
H51.43470.32511.14560.100*
C61.2919 (5)0.2680 (3)1.1666 (4)0.0815 (13)
H61.34740.23541.22180.098*
C71.1602 (5)0.2619 (2)1.1307 (3)0.0745 (12)
H71.12620.22431.16030.089*
C81.0740 (4)0.3116 (2)1.0490 (3)0.0556 (9)
C91.1271 (4)0.3676 (2)1.0047 (3)0.0562 (9)
C100.8121 (4)0.4607 (2)0.8015 (3)0.0523 (9)
C110.8492 (4)0.5283 (2)0.7693 (3)0.0617 (10)
H110.93600.54430.80560.074*
C120.7610 (4)0.5723 (2)0.6852 (3)0.0729 (12)
H120.78840.61720.66440.088*
C130.6320 (4)0.5498 (3)0.6320 (3)0.0755 (12)
H130.57240.57880.57380.091*
C140.5918 (5)0.4853 (3)0.6642 (4)0.0812 (13)
H140.50390.47110.62970.097*
C150.6803 (4)0.4402 (2)0.7479 (3)0.0678 (10)
H150.65150.39580.76860.081*
U11U22U33U12U13U23
Se10.0824 (3)0.0453 (3)0.0779 (3)−0.0142 (2)0.0420 (2)0.00255 (19)
N10.0679 (19)0.0398 (17)0.0617 (18)−0.0123 (15)0.0370 (16)−0.0059 (15)
C10.071 (3)0.041 (2)0.060 (2)−0.0144 (19)0.036 (2)−0.0107 (19)
C20.066 (2)0.040 (2)0.058 (2)−0.0114 (17)0.0373 (18)−0.0113 (17)
C30.073 (3)0.055 (2)0.059 (2)−0.0138 (19)0.038 (2)−0.0005 (19)
C40.068 (3)0.085 (3)0.066 (3)−0.014 (2)0.028 (2)0.003 (2)
C50.070 (3)0.107 (4)0.068 (3)−0.009 (3)0.023 (2)−0.003 (3)
C60.084 (3)0.083 (3)0.064 (3)0.000 (3)0.018 (2)0.004 (2)
C70.089 (3)0.063 (3)0.073 (3)−0.011 (2)0.036 (3)0.002 (2)
C80.074 (3)0.047 (2)0.053 (2)−0.0104 (19)0.033 (2)−0.0098 (18)
C90.067 (2)0.056 (2)0.051 (2)−0.0148 (19)0.0311 (19)−0.0088 (18)
C100.069 (2)0.044 (2)0.057 (2)−0.0042 (18)0.040 (2)−0.0073 (17)
C110.074 (3)0.052 (2)0.076 (3)−0.0048 (19)0.048 (2)−0.003 (2)
C120.099 (3)0.055 (3)0.084 (3)0.007 (2)0.058 (3)0.012 (2)
C130.083 (3)0.079 (3)0.069 (3)0.015 (3)0.036 (3)0.005 (2)
C140.077 (3)0.087 (4)0.074 (3)−0.007 (3)0.027 (2)−0.001 (3)
C150.073 (3)0.059 (3)0.074 (3)−0.012 (2)0.034 (2)−0.006 (2)
Se1—C11.928 (4)C6—H60.9300
Se1—Se1i2.3439 (9)C7—C81.408 (5)
N1—C11.301 (4)C7—H70.9300
N1—C21.370 (4)C8—C91.402 (5)
C1—C81.422 (5)C10—C111.383 (5)
C2—C31.368 (5)C10—C151.392 (5)
C2—C101.478 (5)C11—C121.373 (5)
C3—C91.410 (5)C11—H110.9300
C3—H30.9300C12—C131.375 (5)
C4—C51.356 (6)C12—H120.9300
C4—C91.415 (5)C13—C141.354 (6)
C4—H40.9300C13—H130.9300
C5—C61.380 (6)C14—C151.381 (5)
C5—H50.9300C14—H140.9300
C6—C71.354 (6)C15—H150.9300
C1—Se1—Se1i92.40 (12)C9—C8—C1116.1 (3)
C1—N1—C2119.0 (3)C7—C8—C1125.2 (4)
N1—C1—C8124.9 (3)C8—C9—C3118.6 (3)
N1—C1—Se1117.5 (3)C8—C9—C4118.7 (4)
C8—C1—Se1117.6 (3)C3—C9—C4122.7 (4)
C3—C2—N1120.8 (3)C11—C10—C15117.3 (4)
C3—C2—C10123.1 (3)C11—C10—C2122.0 (3)
N1—C2—C10116.0 (3)C15—C10—C2120.7 (3)
C2—C3—C9120.6 (3)C12—C11—C10121.6 (4)
C2—C3—H3119.7C12—C11—H11119.2
C9—C3—H3119.7C10—C11—H11119.2
C5—C4—C9120.5 (4)C11—C12—C13119.8 (4)
C5—C4—H4119.7C11—C12—H12120.1
C9—C4—H4119.7C13—C12—H12120.1
C4—C5—C6120.7 (4)C14—C13—C12120.0 (4)
C4—C5—H5119.7C14—C13—H13120.0
C6—C5—H5119.7C12—C13—H13120.0
C7—C6—C5120.4 (4)C13—C14—C15120.6 (4)
C7—C6—H6119.8C13—C14—H14119.7
C5—C6—H6119.8C15—C14—H14119.7
C6—C7—C8121.0 (4)C14—C15—C10120.7 (4)
C6—C7—H7119.5C14—C15—H15119.7
C8—C7—H7119.5C10—C15—H15119.7
C9—C8—C7118.7 (4)
C2—N1—C1—C8−0.6 (5)C7—C8—C9—C40.1 (5)
C2—N1—C1—Se1−179.3 (2)C1—C8—C9—C4−178.8 (3)
Se1i—Se1—C1—N10.9 (3)C2—C3—C9—C8−0.1 (5)
Se1i—Se1—C1—C8−177.9 (3)C2—C3—C9—C4179.9 (3)
C1—N1—C2—C31.8 (5)C5—C4—C9—C80.3 (6)
C1—N1—C2—C10179.4 (3)C5—C4—C9—C3−179.7 (4)
N1—C2—C3—C9−1.5 (5)C3—C2—C10—C11−16.2 (5)
C10—C2—C3—C9−178.9 (3)N1—C2—C10—C11166.3 (3)
C9—C4—C5—C6−1.3 (7)C3—C2—C10—C15163.0 (3)
C4—C5—C6—C71.9 (7)N1—C2—C10—C15−14.5 (5)
C5—C6—C7—C8−1.5 (7)C15—C10—C11—C12−2.3 (5)
C6—C7—C8—C90.4 (6)C2—C10—C11—C12176.9 (3)
C6—C7—C8—C1179.2 (4)C10—C11—C12—C130.9 (6)
N1—C1—C8—C9−0.9 (5)C11—C12—C13—C141.5 (6)
Se1—C1—C8—C9177.8 (2)C12—C13—C14—C15−2.2 (7)
N1—C1—C8—C7−179.7 (3)C13—C14—C15—C100.7 (6)
Se1—C1—C8—C7−1.1 (5)C11—C10—C15—C141.6 (6)
C7—C8—C9—C3−179.9 (3)C2—C10—C15—C14−177.7 (3)
C1—C8—C9—C31.2 (5)
  1 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  1 in total
  8 in total

1.  3-(1,3-Dioxolan-2-yl)-2-hydrazino-7-methyl-quinoline.

Authors:  R Subashini; Venkatesha R Hathwar; P Nithya; K Prabakaran; F Nawaz Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-28

2.  1-(3,5-Dimethyl-1H-pyrazol-1-yl)-3-phenyl-isoquinoline.

Authors:  P Manivel; Venkatesha R Hathwar; T Maiyalagan; V Krishnakumar; F Nawaz Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-08

3.  1-(4-Chloro-phen-yl)-2-[(3-phenyl-isoquinolin-1-yl)sulfan-yl]ethanone.

Authors:  P Manivel; Venkatesha R Hathwar; P Nithya; R Subashini; F Nawaz Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-08

4.  3-Acetyl-6-chloro-1-ethyl-4-phenyl-quinolin-2(1H)-one.

Authors:  R Subashini; Venkatesha R Hathwar; T Maiyalagan; G Ganesh Kumar Reddy; F Nawaz Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-08

5.  1-(4-Chloro-3-fluoro-phen-yl)-2-[(3-phenyl-isoquinolin-1-yl)sulfan-yl]ethanone.

Authors:  P Manivel; Venkatesha R Hathwar; T Maiyalagan; N Burcu Arslan; F Nawaz Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-17

6.  Methyl (3S,10b'S)-5-chloro-9'-fluoro-1-methyl-2-oxo-5'-phenyl-10b'H-spiro-[indoline-3,1'-pyrazolo-[3,2-a]iso-quinoline]-2'-carboxyl-ate.

Authors:  Piskala Subburaman Kannan; Panneerselvam Yuvaraj; Boreddy Siva Rami Reddy; Rajamani Raja; Arunachalathevar Subbiahpandi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-04

7.  1-(3-Phenyl-isoquinolin-1-yl)hydrazine.

Authors:  P Manivel; Venkatesha R Hathwar; P Nithya; K Prabakaran; F Nawaz Khan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-12-17

8.  1-(3,5-Diethyl-1H-pyrazol-1-yl)-3-phenyl-isoquinoline.

Authors:  F Nawaz Khan; P Manivel; S Mohana Roopan; Venkatesha R Hathwar; Mehmet Akkurt
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-21
  8 in total

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