| Literature DB >> 21581203 |
Ke-Fei Han1, Hui-Yong Wu, Zhong-Ming Wang, Hong-You Guo.
Abstract
In the title compound, [Cu(2)Cl(2)(NO(3))(2)(C(12)H(8)N(2)O(4))(2)(H(2)O)(2)], which consists of a chloride-bridged Cu(II) dimer, the Cu atom is in a distorted octa-hedral environment defined by two N atoms from the 2,2'-bipyridine-4,4'-dicarboxylic acid ligand (H(2)bpdca), two bridging chlorido ligands, and two O atoms from an equatorial water mol-ecule and an axial nitrate anion, respectively. The two halves of the dimeric unit are related by an inversion centre at the midpoint between the two Cu atoms. Both carboxylic acid groups in the H(2)bpdca ligand remain protonated, as confirmed by the two sets of C-O bond lengths. The dinuclear mol-ecules are linked into a three-dimensional network via inter-molecular hydrogen bonds.Entities:
Year: 2008 PMID: 21581203 PMCID: PMC2959964 DOI: 10.1107/S1600536808028511
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Cu2Cl2(NO3)2(C12H8N2O4)2(H2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 6664 reflections | |
| θ = 1.6–27.5º | |
| µ = 1.72 mm−1 | |
| α = 92.315 (2)º | |
| β = 103.384 (4)º | Block, blue |
| γ = 98.556 (3)º | 0.30 × 0.24 × 0.20 mm |
| Rigaku R-AXIS RAPID IP area-detector diffractometer | |
| ω oscillation scans | θmax = 27.5º |
| Absorption correction: multi-scan(ABSCOR; Higashi, 1995) | θmin = 1.6º |
| 5180 measured reflections | |
| 3301 independent reflections | |
| 3116 reflections with |
| Refinement on | 3 restraints |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.67 e Å−3 | |
| 3301 reflections | Δρmin = −0.72 e Å−3 |
| 238 parameters | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| O6 | 0.1325 (5) | 0.1681 (3) | 0.1741 (2) | 0.0691 (8) | |
| Cu1 | 0.37742 (4) | 0.02464 (4) | 0.10473 (2) | 0.02764 (12) | |
| Cl1 | 0.30801 (9) | 0.10642 (8) | −0.05463 (4) | 0.03186 (15) | |
| N1 | 0.4725 (3) | −0.0507 (2) | 0.24369 (15) | 0.0250 (4) | |
| N2 | 0.5689 (3) | 0.2299 (3) | 0.16874 (16) | 0.0274 (4) | |
| N3 | 0.1423 (4) | 0.3230 (4) | 0.1725 (2) | 0.0465 (6) | |
| O1 | 0.1477 (3) | −0.1609 (3) | 0.07198 (16) | 0.0380 (4) | |
| O2 | 0.9538 (3) | 0.7885 (2) | 0.28428 (16) | 0.0396 (5) | |
| O3 | 1.0190 (4) | 0.6606 (3) | 0.42733 (17) | 0.0536 (6) | |
| O4 | 0.8547 (3) | −0.0671 (3) | 0.60227 (16) | 0.0454 (5) | |
| O5 | 0.6480 (3) | −0.3083 (2) | 0.57019 (15) | 0.0395 (5) | |
| O7 | 0.2266 (4) | 0.4133 (3) | 0.25273 (16) | 0.0443 (5) | |
| O8 | 0.0715 (7) | 0.3831 (6) | 0.0958 (2) | 0.1053 (15) | |
| C1 | 0.6048 (5) | 0.3690 (3) | 0.1234 (2) | 0.0368 (6) | |
| H1 | 0.546 | 0.371 | 0.0545 | 0.044* | |
| C2 | 0.7267 (5) | 0.5113 (3) | 0.1753 (2) | 0.0369 (6) | |
| H2 | 0.7505 | 0.607 | 0.1419 | 0.044* | |
| C3 | 0.8119 (4) | 0.5075 (3) | 0.27753 (19) | 0.0269 (5) | |
| C4 | 0.7771 (4) | 0.3630 (3) | 0.32546 (18) | 0.0264 (5) | |
| H4 | 0.8347 | 0.3585 | 0.3943 | 0.032* | |
| C5 | 0.6542 (3) | 0.2250 (3) | 0.26844 (17) | 0.0238 (4) | |
| C6 | 0.6057 (3) | 0.0642 (3) | 0.31031 (18) | 0.0241 (4) | |
| C7 | 0.6879 (4) | 0.0294 (3) | 0.40842 (18) | 0.0256 (5) | |
| H7 | 0.7793 | 0.1096 | 0.4532 | 0.031* | |
| C8 | 0.6319 (4) | −0.1272 (3) | 0.43924 (18) | 0.0247 (4) | |
| C9 | 0.4958 (4) | −0.2451 (3) | 0.37088 (19) | 0.0289 (5) | |
| H9 | 0.4564 | −0.3507 | 0.3903 | 0.035* | |
| C10 | 0.4201 (4) | −0.2024 (3) | 0.27330 (19) | 0.0287 (5) | |
| H10 | 0.3303 | −0.2814 | 0.2269 | 0.034* | |
| C11 | 0.9409 (4) | 0.6586 (3) | 0.3387 (2) | 0.0298 (5) | |
| C12 | 0.7236 (4) | −0.1641 (3) | 0.54572 (19) | 0.0276 (5) | |
| H1WA | 0.050 (4) | −0.139 (5) | 0.090 (3) | 0.041* | |
| H1WB | 0.113 (5) | −0.204 (4) | 0.0152 (17) | 0.041* | |
| H2A | 1.017 (5) | 0.861 (5) | 0.322 (3) | 0.041* | |
| H5A | 0.694 (5) | −0.333 (4) | 0.6256 (17) | 0.041* |
| O6 | 0.0764 (18) | 0.0465 (14) | 0.083 (2) | −0.0156 (12) | 0.0381 (16) | −0.0248 (14) |
| Cu1 | 0.03280 (18) | 0.02355 (17) | 0.02061 (17) | −0.00261 (12) | −0.00096 (12) | 0.00132 (11) |
| Cl1 | 0.0367 (3) | 0.0334 (3) | 0.0226 (3) | 0.0066 (2) | 0.0004 (2) | 0.0039 (2) |
| N1 | 0.0277 (9) | 0.0206 (9) | 0.0236 (9) | −0.0004 (7) | 0.0029 (7) | 0.0005 (7) |
| N2 | 0.0319 (10) | 0.0229 (9) | 0.0229 (10) | −0.0007 (8) | 0.0013 (8) | 0.0011 (8) |
| N3 | 0.0386 (13) | 0.0620 (18) | 0.0352 (13) | 0.0166 (12) | −0.0014 (10) | −0.0100 (12) |
| O1 | 0.0364 (10) | 0.0346 (10) | 0.0334 (10) | −0.0049 (8) | −0.0035 (8) | −0.0017 (8) |
| O2 | 0.0515 (12) | 0.0230 (9) | 0.0329 (10) | −0.0102 (8) | −0.0024 (9) | 0.0017 (8) |
| O3 | 0.0758 (16) | 0.0345 (11) | 0.0312 (11) | −0.0132 (10) | −0.0119 (10) | 0.0039 (9) |
| O4 | 0.0549 (13) | 0.0326 (10) | 0.0323 (10) | −0.0135 (9) | −0.0098 (9) | 0.0055 (8) |
| O5 | 0.0518 (12) | 0.0285 (9) | 0.0276 (10) | −0.0093 (8) | −0.0032 (8) | 0.0098 (8) |
| O7 | 0.0621 (13) | 0.0303 (10) | 0.0298 (10) | 0.0002 (9) | −0.0052 (9) | −0.0007 (8) |
| O8 | 0.145 (3) | 0.132 (3) | 0.0376 (15) | 0.086 (3) | −0.0179 (18) | −0.0050 (18) |
| C1 | 0.0498 (15) | 0.0273 (12) | 0.0242 (12) | −0.0046 (11) | −0.0033 (11) | 0.0058 (10) |
| C2 | 0.0501 (16) | 0.0250 (12) | 0.0279 (13) | −0.0043 (11) | −0.0001 (11) | 0.0078 (10) |
| C3 | 0.0278 (11) | 0.0219 (11) | 0.0267 (12) | −0.0015 (9) | 0.0018 (9) | 0.0004 (9) |
| C4 | 0.0298 (11) | 0.0229 (11) | 0.0219 (11) | −0.0017 (9) | 0.0002 (9) | 0.0032 (9) |
| C5 | 0.0269 (10) | 0.0211 (10) | 0.0216 (11) | 0.0005 (8) | 0.0042 (8) | 0.0031 (8) |
| C6 | 0.0254 (10) | 0.0204 (10) | 0.0245 (11) | −0.0006 (8) | 0.0049 (9) | 0.0002 (8) |
| C7 | 0.0290 (11) | 0.0202 (10) | 0.0238 (11) | −0.0020 (8) | 0.0023 (9) | 0.0008 (8) |
| C8 | 0.0286 (11) | 0.0207 (10) | 0.0225 (11) | −0.0001 (8) | 0.0038 (9) | 0.0014 (8) |
| C9 | 0.0327 (12) | 0.0205 (11) | 0.0293 (12) | −0.0031 (9) | 0.0036 (9) | 0.0030 (9) |
| C10 | 0.0316 (12) | 0.0213 (11) | 0.0278 (12) | −0.0038 (9) | 0.0020 (9) | 0.0000 (9) |
| C11 | 0.0319 (12) | 0.0235 (11) | 0.0294 (12) | −0.0027 (9) | 0.0027 (10) | 0.0005 (9) |
| C12 | 0.0327 (12) | 0.0216 (11) | 0.0256 (11) | 0.0002 (9) | 0.0034 (9) | 0.0034 (9) |
| O6—N3 | 1.255 (4) | O5—C12 | 1.302 (3) |
| O6—Cu1 | 2.528 (3) | O5—H5A | 0.790 (18) |
| Cu1—O1 | 1.982 (2) | C1—C2 | 1.387 (4) |
| Cu1—N1 | 1.999 (2) | C1—H1 | 0.93 |
| Cu1—N2 | 2.002 (2) | C2—C3 | 1.378 (4) |
| Cu1—Cl1 | 2.2511 (7) | C2—H2 | 0.93 |
| Cu1—Cl1i | 2.7757 (8) | C3—C4 | 1.384 (3) |
| N1—C10 | 1.340 (3) | C3—C11 | 1.501 (3) |
| N1—C6 | 1.355 (3) | C4—C5 | 1.389 (3) |
| N2—C1 | 1.330 (3) | C4—H4 | 0.93 |
| N2—C5 | 1.348 (3) | C5—C6 | 1.473 (3) |
| N3—O8 | 1.199 (4) | C6—C7 | 1.379 (3) |
| N3—O7 | 1.256 (3) | C7—C8 | 1.387 (3) |
| O1—H1WA | 0.819 (18) | C7—H7 | 0.93 |
| O1—H1WB | 0.802 (18) | C8—C9 | 1.389 (3) |
| O2—C11 | 1.318 (3) | C8—C12 | 1.498 (3) |
| O2—H2A | 0.77 (4) | C9—C10 | 1.384 (4) |
| O3—C11 | 1.196 (3) | C9—H9 | 0.93 |
| O4—C12 | 1.207 (3) | C10—H10 | 0.93 |
| N3—O6—Cu1 | 119.8 (2) | C2—C3—C4 | 119.9 (2) |
| O1—Cu1—N1 | 91.33 (8) | C2—C3—C11 | 121.1 (2) |
| O1—Cu1—N2 | 163.29 (9) | C4—C3—C11 | 119.0 (2) |
| N1—Cu1—N2 | 81.03 (8) | C3—C4—C5 | 118.5 (2) |
| O1—Cu1—Cl1 | 92.53 (6) | C3—C4—H4 | 120.8 |
| N1—Cu1—Cl1 | 172.93 (6) | C5—C4—H4 | 120.8 |
| N2—Cu1—Cl1 | 96.72 (6) | N2—C5—C4 | 121.5 (2) |
| O1—Cu1—O6 | 82.22 (9) | N2—C5—C6 | 114.76 (19) |
| N1—Cu1—O6 | 87.84 (10) | C4—C5—C6 | 123.8 (2) |
| N2—Cu1—O6 | 82.67 (9) | N1—C6—C7 | 121.6 (2) |
| Cl1—Cu1—O6 | 98.54 (8) | N1—C6—C5 | 114.4 (2) |
| C10—N1—C6 | 119.4 (2) | C7—C6—C5 | 124.0 (2) |
| C10—N1—Cu1 | 125.70 (16) | C6—C7—C8 | 118.9 (2) |
| C6—N1—Cu1 | 114.87 (16) | C6—C7—H7 | 120.5 |
| C1—N2—C5 | 119.5 (2) | C8—C7—H7 | 120.5 |
| C1—N2—Cu1 | 125.61 (17) | C7—C8—C9 | 119.5 (2) |
| C5—N2—Cu1 | 114.73 (16) | C7—C8—C12 | 118.5 (2) |
| O8—N3—O6 | 120.4 (3) | C9—C8—C12 | 122.0 (2) |
| O8—N3—O7 | 120.8 (3) | C10—C9—C8 | 118.6 (2) |
| O6—N3—O7 | 118.8 (3) | C10—C9—H9 | 120.7 |
| Cu1—O1—H1WA | 113 (3) | C8—C9—H9 | 120.7 |
| Cu1—O1—H1WB | 118 (3) | N1—C10—C9 | 121.9 (2) |
| H1WA—O1—H1WB | 110 (4) | N1—C10—H10 | 119 |
| C11—O2—H2A | 106 (3) | C9—C10—H10 | 119 |
| C12—O5—H5A | 116 (3) | O3—C11—O2 | 124.3 (2) |
| N2—C1—C2 | 122.3 (2) | O3—C11—C3 | 123.3 (2) |
| N2—C1—H1 | 118.9 | O2—C11—C3 | 112.3 (2) |
| C2—C1—H1 | 118.9 | O4—C12—O5 | 124.2 (2) |
| C3—C2—C1 | 118.4 (2) | O4—C12—C8 | 122.1 (2) |
| C3—C2—H2 | 120.8 | O5—C12—C8 | 113.7 (2) |
| C1—C2—H2 | 120.8 | ||
| N3—O6—Cu1—O1 | −149.3 (3) | Cu1—N2—C5—C4 | −174.51 (18) |
| N3—O6—Cu1—N1 | 119.1 (3) | C1—N2—C5—C6 | −179.3 (2) |
| N3—O6—Cu1—N2 | 37.8 (3) | Cu1—N2—C5—C6 | 5.3 (3) |
| N3—O6—Cu1—Cl1 | −57.9 (3) | C3—C4—C5—N2 | −0.3 (4) |
| O1—Cu1—N1—C10 | 18.5 (2) | C3—C4—C5—C6 | 179.9 (2) |
| N2—Cu1—N1—C10 | −176.4 (2) | C10—N1—C6—C7 | −0.6 (3) |
| Cl1—Cu1—N1—C10 | −104.5 (5) | Cu1—N1—C6—C7 | −178.66 (18) |
| O6—Cu1—N1—C10 | 100.7 (2) | C10—N1—C6—C5 | 178.9 (2) |
| O1—Cu1—N1—C6 | −163.57 (17) | Cu1—N1—C6—C5 | 0.9 (3) |
| N2—Cu1—N1—C6 | 1.50 (16) | N2—C5—C6—N1 | −4.1 (3) |
| Cl1—Cu1—N1—C6 | 73.4 (5) | C4—C5—C6—N1 | 175.7 (2) |
| O6—Cu1—N1—C6 | −81.41 (17) | N2—C5—C6—C7 | 175.4 (2) |
| O1—Cu1—N2—C1 | −115.2 (3) | C4—C5—C6—C7 | −4.7 (4) |
| N1—Cu1—N2—C1 | −178.8 (2) | N1—C6—C7—C8 | −0.1 (4) |
| Cl1—Cu1—N2—C1 | 7.9 (2) | C5—C6—C7—C8 | −179.5 (2) |
| O6—Cu1—N2—C1 | −89.9 (2) | C6—C7—C8—C9 | 0.3 (4) |
| O1—Cu1—N2—C5 | 59.8 (4) | C6—C7—C8—C12 | 179.4 (2) |
| N1—Cu1—N2—C5 | −3.82 (17) | C7—C8—C9—C10 | 0.2 (4) |
| Cl1—Cu1—N2—C5 | −177.06 (16) | C12—C8—C9—C10 | −179.0 (2) |
| O6—Cu1—N2—C5 | 85.14 (19) | C6—N1—C10—C9 | 1.1 (4) |
| Cu1—O6—N3—O8 | 80.0 (4) | Cu1—N1—C10—C9 | 178.90 (19) |
| Cu1—O6—N3—O7 | −100.2 (3) | C8—C9—C10—N1 | −0.8 (4) |
| C5—N2—C1—C2 | −0.5 (4) | C2—C3—C11—O3 | −179.4 (3) |
| Cu1—N2—C1—C2 | 174.3 (2) | C4—C3—C11—O3 | 1.3 (4) |
| N2—C1—C2—C3 | −0.4 (5) | C2—C3—C11—O2 | 2.1 (4) |
| C1—C2—C3—C4 | 1.0 (4) | C4—C3—C11—O2 | −177.3 (2) |
| C1—C2—C3—C11 | −178.3 (3) | C7—C8—C12—O4 | −5.8 (4) |
| C2—C3—C4—C5 | −0.6 (4) | C9—C8—C12—O4 | 173.4 (3) |
| C11—C3—C4—C5 | 178.7 (2) | C7—C8—C12—O5 | 174.0 (2) |
| C1—N2—C5—C4 | 0.8 (4) | C9—C8—C12—O5 | −6.9 (4) |
| H··· | ||||
| C7—H7···O3ii | 0.93 | 2.45 | 3.376 (3) | 172 |
| C4—H4···O3ii | 0.93 | 2.42 | 3.346 (3) | 179 |
| C2—H2···Cl1iii | 0.93 | 2.7 | 3.590 (3) | 160 |
| C1—H1···Cl1 | 0.93 | 2.67 | 3.258 (3) | 122 |
| O5—H5A···O7iv | 0.790 (18) | 1.798 (19) | 2.582 (3) | 172 (4) |
| O2—H2A···O4ii | 0.77 (4) | 1.92 (4) | 2.676 (3) | 169 (4) |
| O1—H1WB···O8v | 0.802 (18) | 2.10 (2) | 2.830 (4) | 152 (4) |
| O1—H1WA···Cl1v | 0.819 (18) | 2.48 (2) | 3.220 (2) | 152 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C7—H7⋯O3i | 0.93 | 2.45 | 3.376 (3) | 172 |
| C4—H4⋯O3i | 0.93 | 2.42 | 3.346 (3) | 179 |
| C2—H2⋯Cl1ii | 0.93 | 2.7 | 3.590 (3) | 160 |
| C1—H1⋯Cl1 | 0.93 | 2.67 | 3.258 (3) | 122 |
| O5—H5 | 0.790 (18) | 1.798 (19) | 2.582 (3) | 172 (4) |
| O2—H2 | 0.77 (4) | 1.92 (4) | 2.676 (3) | 169 (4) |
| O1—H1 | 0.802 (18) | 2.10 (2) | 2.830 (4) | 152 (4) |
| O1—H1 | 0.819 (18) | 2.48 (2) | 3.220 (2) | 152 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .