Literature DB >> 21581078

1-(3-Chloro-benz-yl)-5-iodo-indoline-2,3-dione.

Obaid-Ur-Rahman Abid, Ghulam Qadeer, Nasim Hasan Rama, Ales Ruzicka.   

Abstract

In the title compound, C(15)H(9)ClINO(2), which possesses anticonvulsant activity, the iodo-indoline ring system is essentially planar (maximum deviation 1.245 Å) and is oriented with respect to the 3-chloro-benzyl ring at a dihedral angle of 76.59 (3)°. In the crystal, there is a π-π contact between iodo-indoline ring systems [centroid-centroid distance = 3.8188 (4) Å].

Entities:  

Year:  2008        PMID: 21581078      PMCID: PMC2959599          DOI: 10.1107/S1600536808034727

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Hibino & Choshi (2002 ▶); Somei & Yamada (2003 ▶); Popp (1977 ▶); Popp (1984 ▶). For related structures, see: Chakraborty & Talapatra (1985 ▶); Chakraborty et al. (1985 ▶); Codding et al. (1984 ▶); De (1992 ▶); De & Kitagawa (1991a ▶,b ▶); Itai et al. (1978 ▶). For bond-length data, see: Allen et al. (1987 ▶);

Experimental

Crystal data

C15H9ClINO2 M = 397.58 Monoclinic, a = 8.1241 (6) Å b = 11.7930 (8) Å c = 14.7001 (2) Å β = 90.751 (3)° V = 1408.23 (14) Å3 Z = 4 Mo Kα radiation μ = 2.46 mm−1 T = 150 (1) K 0.37 × 0.30 × 0.06 mm

Data collection

Bruker–Nonius KappaCCD area-detector diffractometer Absorption correction: integration (Coppens, 1970 ▶) T min = 0.473, T max = 0.837 12236 measured reflections 3203 independent reflections 2570 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.039 wR(F 2) = 0.104 S = 1.11 3203 reflections 181 parameters H-atom parameters constrained Δρmax = 1.43 e Å−3 Δρmin = −0.79 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: COLLECT and DENZO (Otwinowski & Minor, 1997 ▶); data reduction: COLLECT and DENZO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2003 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808034727/hk2560sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034727/hk2560Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H9ClINO2F(000) = 768
Mr = 397.58Dx = 1.875 Mg m3
Monoclinic, P21/cMelting point: 411(1) K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 8.1241 (6) ÅCell parameters from 12323 reflections
b = 11.7930 (8) Åθ = 1–27.5°
c = 14.7001 (2) ŵ = 2.46 mm1
β = 90.751 (3)°T = 150 K
V = 1408.23 (14) Å3Plate, colorless
Z = 40.37 × 0.30 × 0.06 mm
Bruker–Nonius KappaCCD area-detector diffractometer3203 independent reflections
Radiation source: fine-focus sealed tube2570 reflections with I > 2σ(I)
graphiteRint = 0.051
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 2.2°
φ and ω scansh = −10→9
Absorption correction: integration (Coppens, 1970)k = −15→14
Tmin = 0.473, Tmax = 0.837l = −17→19
12236 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.039Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.104H-atom parameters constrained
S = 1.11w = 1/[σ2(Fo2) + (0.0373P)2 + 3.1264P] where P = (Fo2 + 2Fc2)/3
3203 reflections(Δ/σ)max < 0.001
181 parametersΔρmax = 1.43 e Å3
0 restraintsΔρmin = −0.79 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.21126 (4)−0.00688 (3)−0.168370 (19)0.04622 (13)
Cl10.0801 (2)0.12211 (13)0.61991 (8)0.0713 (5)
N10.3994 (4)0.1400 (3)0.2264 (2)0.0304 (7)
O10.5622 (4)0.2894 (3)0.2730 (2)0.0454 (8)
O20.5749 (4)0.3308 (3)0.0755 (2)0.0472 (8)
C10.4945 (5)0.2340 (3)0.2144 (3)0.0331 (8)
C20.5037 (5)0.2528 (3)0.1103 (3)0.0330 (8)
C30.4080 (5)0.1602 (3)0.0698 (3)0.0286 (8)
C40.3728 (5)0.1328 (3)−0.0195 (3)0.0305 (8)
H40.41380.1759−0.06700.037*
C50.2736 (5)0.0393 (3)−0.0354 (3)0.0311 (8)
C60.2127 (5)−0.0241 (3)0.0360 (3)0.0360 (9)
H60.1452−0.08600.02350.043*
C70.2493 (5)0.0025 (3)0.1261 (3)0.0333 (8)
H70.2090−0.04060.17390.040*
C80.3475 (4)0.0955 (3)0.1419 (2)0.0261 (7)
C90.3778 (5)0.0850 (4)0.3135 (3)0.0354 (9)
H9A0.47250.10160.35210.043*
H9B0.37430.00360.30420.043*
C100.2237 (5)0.1204 (3)0.3623 (3)0.0339 (8)
C110.2173 (6)0.1038 (4)0.4557 (3)0.0385 (9)
H110.30570.07080.48660.046*
C120.0790 (7)0.1355 (4)0.5020 (3)0.0434 (11)
C13−0.0563 (7)0.1805 (4)0.4584 (4)0.0528 (13)
H13−0.14910.20100.49100.063*
C14−0.0506 (6)0.1953 (4)0.3650 (3)0.0449 (11)
H14−0.14220.22320.33370.054*
C150.0905 (5)0.1688 (3)0.3183 (3)0.0363 (9)
H150.09560.18360.25630.044*
U11U22U33U12U13U23
I10.03707 (18)0.0640 (2)0.03741 (18)0.01182 (13)−0.00630 (12)−0.01648 (13)
Cl10.1128 (13)0.0684 (9)0.0331 (6)−0.0229 (8)0.0206 (7)−0.0073 (6)
N10.0271 (17)0.0358 (17)0.0284 (16)−0.0010 (13)0.0047 (12)−0.0009 (13)
O10.0425 (18)0.0493 (18)0.0443 (17)−0.0059 (14)−0.0025 (14)−0.0135 (14)
O20.0465 (19)0.0435 (17)0.0519 (19)−0.0149 (14)0.0100 (15)0.0029 (14)
C10.029 (2)0.035 (2)0.0356 (19)0.0031 (16)0.0049 (15)−0.0059 (16)
C20.027 (2)0.0309 (19)0.041 (2)−0.0003 (15)0.0081 (16)−0.0015 (16)
C30.0227 (18)0.0307 (18)0.0325 (19)0.0017 (14)0.0062 (14)0.0007 (15)
C40.027 (2)0.0349 (19)0.0302 (18)0.0065 (15)0.0041 (15)−0.0003 (15)
C50.027 (2)0.0361 (19)0.0299 (18)0.0080 (16)0.0000 (15)−0.0064 (16)
C60.030 (2)0.033 (2)0.045 (2)−0.0015 (16)−0.0017 (17)−0.0033 (17)
C70.029 (2)0.0333 (19)0.038 (2)−0.0004 (16)0.0059 (16)0.0052 (16)
C80.0222 (18)0.0304 (17)0.0260 (16)0.0047 (14)0.0038 (13)0.0000 (14)
C90.034 (2)0.045 (2)0.0275 (18)0.0062 (18)0.0030 (16)0.0041 (17)
C100.038 (2)0.0315 (19)0.0318 (19)−0.0012 (16)0.0048 (16)0.0026 (15)
C110.048 (3)0.037 (2)0.031 (2)−0.0049 (19)0.0024 (18)−0.0002 (17)
C120.065 (3)0.037 (2)0.029 (2)−0.013 (2)0.0120 (19)−0.0039 (17)
C130.054 (3)0.042 (2)0.063 (3)−0.009 (2)0.026 (2)−0.013 (2)
C140.038 (2)0.046 (2)0.051 (3)0.0084 (19)0.009 (2)0.002 (2)
C150.038 (2)0.040 (2)0.0306 (19)0.0019 (18)0.0019 (16)0.0027 (17)
I1—C52.086 (4)C7—C81.374 (5)
Cl1—C121.740 (4)C7—H70.9301
N1—C11.364 (5)C9—C101.510 (6)
N1—C81.407 (5)C9—H9A0.9700
N1—C91.448 (5)C9—H9B0.9701
O1—C11.208 (5)C11—C101.388 (6)
O2—C21.204 (5)C11—H110.9300
C1—C21.550 (6)C12—C131.372 (8)
C2—C31.463 (5)C12—C111.373 (7)
C3—C81.401 (5)C13—C141.386 (7)
C4—C31.378 (5)C13—H130.9299
C4—H40.9299C14—H140.9300
C5—C41.384 (6)C15—C101.377 (6)
C5—C61.384 (6)C15—C141.379 (6)
C6—H60.9300C15—H150.9299
C7—C61.390 (6)
C1—N1—C8110.7 (3)C3—C8—N1111.1 (3)
C1—N1—C9123.6 (3)N1—C9—C10114.0 (3)
C8—N1—C9125.1 (3)N1—C9—H9A108.8
O1—C1—N1126.9 (4)C10—C9—H9A108.8
O1—C1—C2126.8 (4)N1—C9—H9B108.8
N1—C1—C2106.2 (3)C10—C9—H9B108.5
O2—C2—C3130.8 (4)H9A—C9—H9B107.6
O2—C2—C1124.0 (4)C15—C10—C11118.9 (4)
C3—C2—C1105.2 (3)C15—C10—C9122.9 (4)
C4—C3—C8121.5 (4)C11—C10—C9118.2 (4)
C4—C3—C2131.7 (4)C12—C11—C10119.5 (4)
C8—C3—C2106.8 (3)C12—C11—H11120.2
C3—C4—C5117.4 (4)C10—C11—H11120.3
C3—C4—H4121.1C13—C12—C11122.0 (4)
C5—C4—H4121.5C13—C12—Cl1119.6 (4)
C4—C5—C6121.0 (4)C11—C12—Cl1118.4 (4)
C4—C5—I1120.0 (3)C12—C13—C14118.3 (4)
C6—C5—I1119.0 (3)C12—C13—H13120.7
C5—C6—C7121.7 (4)C14—C13—H13121.0
C5—C6—H6119.3C15—C14—C13120.2 (5)
C7—C6—H6119.0C15—C14—H14119.9
C8—C7—C6117.3 (4)C13—C14—H14119.9
C8—C7—H7121.2C10—C15—C14120.9 (4)
C6—C7—H7121.5C10—C15—H15119.5
C7—C8—C3121.0 (3)C14—C15—H15119.6
C7—C8—N1127.9 (3)
  4 in total

Review 1.  Simple indole alkaloids and those with a nonrearranged monoterpenoid unit.

Authors:  Masanori Somei; Fumio Yamada
Journal:  Nat Prod Rep       Date:  2003-04       Impact factor: 13.423

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Simple indole alkaloids and those with a nonrearranged monoterpenoid unit.

Authors:  Satoshi Hibino; Tominari Choshi
Journal:  Nat Prod Rep       Date:  2002-04       Impact factor: 13.423

4.  Cyheptamide and 3-hydroxy-3-phenacyloxindole: structural similarity to diphenylhydantoin as the basis for anticonvulsant activity.

Authors:  P W Codding; T A Lee; J F Richardson
Journal:  J Med Chem       Date:  1984-05       Impact factor: 7.446

  4 in total
  1 in total

1.  1-Ethyl-5-iodo-indoline-2,3-dione.

Authors:  Lei Wang; Yu-Xiang Shen; Jian-Tong Dong; Man Zhang; Qi Fang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-12-14
  1 in total

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