Literature DB >> 21581062

4-(Ammonio-meth-yl)pyridinium dichloride.

Meher El Glaoui, Riadh Kefi, Olfa Amri, Erwann Jeanneau, Cherif Ben Nasr.   

Abstract

The title compound, C(6)H(10)N(2) (2+)·n class="Chemical">2Cl(-), contains a network of 4-(ammonio-meth-yl)pyridinium cations and chloride anions which are inter-connected by N-H⋯Cl hydrogen bonds. The crystal packing is also influenced by inter-molecular π-π stacking inter-actions between identical anti-parallel organic cations with a face-to-face distance of ca 3.52 Å.

Entities:  

Year:  2008        PMID: 21581062      PMCID: PMC2959502          DOI: 10.1107/S1600536808034405

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For common applications of this type of complex, see: Schmidtchen & Berger, (1997 ▶); Pajewski et al. (2004 ▶); Sessler et al. (2003 ▶); Ilioudis et al. (2000 ▶). For structure cohesion, see: Bernstein et al., (1995 ▶); Jin et al., 2005 ▶. For discussion of the CNC angle, see: Krygowski et al. (2005 ▶). For bond-length data, see: Oueslati et al. (2006 ▶).

Experimental

Crystal data

C6H10N2 2+·2Cl M = 181.06 Triclinic, a = 7.257 (2) Å b = 7.339 (3) Å c = 8.752 (1) Å α = 79.14 (3)° β = 70.94 (4)° γ = 70.19 (3)° V = 412.9 (2) Å3 Z = 2 Mo Kα radiation μ = 0.71 mm−1 T = 293 K 0.16 × 0.15 × 0.12 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 3311 measured reflections 1995 independent reflections 1670 reflections with I > 2σ(I) R int = 0.014 2 standard reflections every 400 reflections intensity decay: 4%

Refinement

R[F 2 > 2σ(F 2)] = 0.029 wR(F 2) = 0.030 S = 1.06 1609 reflections 91 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.20 e Å−3 Data collection: CAD-4 EXPRESS (Straver, 1992 ▶); cell refinement: CAD-4 EXPRESS; data reduction: RC93 (Watkin et al., 1994 ▶); program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: CAMERON (Watkin et al., 1996 ▶); software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808034405/bg2217sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808034405/bg2217Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C6H10N22+·2ClZ = 2
Mr = 181.06F(000) = 188
Triclinic, P1Dx = 1.456 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.257 (2) ÅCell parameters from 25 reflections
b = 7.339 (3) Åθ = 9–11°
c = 8.752 (1) ŵ = 0.71 mm1
α = 79.14 (3)°T = 293 K
β = 70.94 (4)°Block, colorless
γ = 70.19 (3)°0.16 × 0.15 × 0.12 mm
V = 412.9 (2) Å3
Enraf–Nonius CAD-4 diffractometerθmax = 28.0°, θmin = 2.5°
graphiteh = −9→9
ω/2θ scansk = −9→9
3311 measured reflectionsl = −5→11
1995 independent reflections2 standard reflections every 400 reflections
1670 reflections with I > 2σ(I) intensity decay: 4%
Rint = 0.014
Refinement on FPrimary atom site location: structure-invariant direct methods
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.030H-atom parameters constrained
wR(F2) = 0.030 [weight] = 1.0/[A0*T0(x) + A1*T1(x) ··· + An-1]*Tn-1(x)] where Ai are the Chebychev coefficients listed below and x = F /Fmax W = [weight] * [1-(deltaF/6*sigmaF)2]2 Ai are: 0.823 0.257 0.531
S = 1.06(Δ/σ)max = 0.001
1609 reflectionsΔρmax = 0.29 e Å3
91 parametersΔρmin = −0.20 e Å3
0 restraints
xyzUiso*/Ueq
Cl10.36975 (6)0.70916 (5)0.85091 (4)0.0357
Cl20.85118 (6)0.60355 (5)0.28807 (4)0.0385
H10.69651.26830.39920.0408*
H20.74260.96130.40090.0420*
H30.79840.76000.62940.0385*
H40.73251.23540.83180.0427*
H50.68241.41620.59390.0458*
H60.71550.93651.00280.0427*
H70.94270.83930.91260.0426*
H80.65160.67570.92740.0509*
H90.87190.58600.87430.0510*
H100.77110.61831.04290.0511*
N10.71013 (19)1.20012 (18)0.48454 (13)0.0347
N20.76974 (19)0.66782 (17)0.94222 (14)0.0340
C10.7421 (2)1.0097 (2)0.49055 (16)0.0330
C20.7738 (2)0.8922 (2)0.62759 (16)0.0309
C30.76881 (19)0.97525 (19)0.76000 (15)0.0263
C40.7352 (2)1.1743 (2)0.74770 (16)0.0350
C50.7057 (3)1.2852 (2)0.60805 (18)0.0401
C60.8048 (2)0.8595 (2)0.91467 (16)0.0334
U11U22U33U12U13U23
Cl10.0459 (2)0.04261 (19)0.02508 (16)−0.01833 (15)−0.01593 (13)0.00223 (12)
Cl20.0537 (2)0.03529 (18)0.02893 (17)−0.01461 (15)−0.01409 (14)−0.00186 (13)
N10.0390 (6)0.0379 (6)0.0203 (5)−0.0065 (5)−0.0087 (4)0.0048 (4)
N20.0397 (6)0.0337 (6)0.0276 (5)−0.0107 (5)−0.0136 (5)0.0062 (4)
C10.0371 (7)0.0430 (8)0.0218 (6)−0.0148 (6)−0.0090 (5)−0.0036 (5)
C20.0393 (7)0.0304 (6)0.0266 (6)−0.0136 (5)−0.0116 (5)−0.0011 (5)
C30.0265 (6)0.0314 (6)0.0214 (5)−0.0101 (5)−0.0071 (4)0.0003 (5)
C40.0487 (8)0.0343 (7)0.0220 (6)−0.0146 (6)−0.0070 (6)−0.0037 (5)
C50.0564 (9)0.0271 (7)0.0287 (7)−0.0076 (6)−0.0074 (6)−0.0010 (5)
C60.0420 (7)0.0359 (7)0.0262 (6)−0.0129 (6)−0.0162 (5)0.0024 (5)
H3—C20.923H9—N20.899
H2—C10.919N1—C11.331 (2)
H5—C50.909N1—C51.333 (2)
H8—N20.890N2—C61.4750 (19)
H7—C60.955C6—C31.5065 (18)
H6—C60.961C1—C21.3750 (19)
H1—N10.831C3—C21.3929 (18)
H4—C40.923C3—C41.386 (2)
H10—N20.890C5—C41.371 (2)
H1—N1—C1118.7H2—C1—N1117.8
H1—N1—C5118.6H2—C1—C2122.2
C1—N1—C5122.62 (12)N1—C1—C2120.03 (13)
H9—N2—H8109.1C6—C3—C2123.50 (12)
H9—N2—H10107.4C6—C3—C4117.95 (12)
H8—N2—H10109.7C2—C3—C4118.52 (12)
H9—N2—C6109.8H5—C5—N1116.9
H8—N2—C6111.9H5—C5—C4123.6
H10—N2—C6108.9N1—C5—C4119.51 (14)
N2—C6—H6109.7C3—C2—C1119.26 (13)
N2—C6—H7108.0C3—C2—H3121.6
H6—C6—H7108.4C1—C2—H3119.2
N2—C6—C3114.31 (11)C3—C4—H4121.5
H6—C6—C3107.3C3—C4—C5120.05 (13)
H7—C6—C3108.9H4—C4—C5118.4
D—H···AD—HH···AD···AD—H···A
N1—H1···Cl1i0.832.363.084 (2)146
N2—H8···Cl10.892.283.160 (3)171
N2—H9···Cl2ii0.902.233.126 (2)173
N2—H10···Cl2iii0.892.373.190 (2)152
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1⋯Cl1i0.832.363.084 (2)146
N2—H8⋯Cl10.892.283.160 (3)171
N2—H9⋯Cl2ii0.902.233.126 (2)173
N2—H10⋯Cl2iii0.892.373.190 (2)152

Symmetry codes: (i) ; (ii) ; (iii) .

  4 in total

1.  Artificial Organic Host Molecules for Anions.

Authors:  Franz P. Schmidtchen; Michael Berger
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

2.  How H-bonding modifies molecular structure and pi-electron delocalization in the ring of pyridine/pyridinium derivatives involved in H-bond complexation.

Authors:  Tadeusz M Krygowski; Halina Szatyłowicz; Joanna E Zachara
Journal:  J Org Chem       Date:  2005-10-28       Impact factor: 4.354

3.  Bis(2-amino-6-methylpyridinium) tetrachlorozincate(II).

Authors:  Zhi-Min Jin; Nan Shun; Ya-Ping Lü; Mao-Lin Hu; Liang Shen
Journal:  Acta Crystallogr C       Date:  2004-12-18       Impact factor: 1.172

4.  Chloride complexation by heptapeptides: influence of C- and N-terminal sidechains and counterion.

Authors:  Robert Pajewski; Riccardo Ferdani; Paul H Schlesinger; George W Gokel
Journal:  Chem Commun (Camb)       Date:  2003-12-05       Impact factor: 6.222

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.