Literature DB >> 21580934

3',6'-Bis(diethyl-amino)-3H-spiro-[2-benzo-thio-phene-1,9'-xanthene]-3-thione.

Bing-Yuan Su, Xin-Qi Zhan, Jian-Nan Guo, Yue-Feng Zhou, Hong Zheng.   

Abstract

The title compound, C(28)H(30)N(2)n class="Chemical">OS(2), was obtained by thio-nation of 3',6'-bis-(diethyl-amino)-3H-spiro-[isobenzofuran-1,9'-xan-thene]-3-one with 2,4-bis-(p-methoxy-phen-yl)-1,3-dithia-diphos-phetane disulfide (Lawesson's reagent). The planes of the two benzene rings of the xanthene system are inclined at a dihedral angle of 17.4 (1)°, and the plane of the dithio-phthalide group and the planes through the two benzene rings of the xanthene system make dihedral angles of 80.2 (1) and 82.8 (1)°, respectively.

Entities:  

Year:  2008        PMID: 21580934      PMCID: PMC2959524          DOI: 10.1107/S1600536808031218

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Sun et al. (2008 ▶).

Experimental

Crystal data

C28H30N2OS2 M = 474.66 Orthorhombic, a = 12.181 (4) Å b = 13.455 (5) Å c = 15.254 (5) Å V = 2500.0 (15) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 173 (2) K 0.36 × 0.33 × 0.23 mm

Data collection

Bruker APEX area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.920, T max = 0.948 12588 measured reflections 2498 independent reflections 2114 reflections with I > 2σ(I) R int = 0.073

Refinement

R[F 2 > 2σ(F 2)] = 0.057 wR(F 2) = 0.136 S = 1.18 2498 reflections 298 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAIn class="Chemical">NT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808031218/kj2093sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808031218/kj2093Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C28H30N2OS2F(000) = 1008
Mr = 474.66Dx = 1.261 Mg m3
Orthorhombic, P212121Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2ac 2abCell parameters from 3199 reflections
a = 12.181 (4) Åθ = 4.5–42.6°
b = 13.455 (5) ŵ = 0.24 mm1
c = 15.254 (5) ÅT = 173 K
V = 2500.0 (15) Å3Block, colorless
Z = 40.36 × 0.33 × 0.23 mm
Bruker APEX area-detector diffractometer2498 independent reflections
Radiation source: fine-focus sealed tube2114 reflections with I > 2σ(I)
graphiteRint = 0.073
φ and ω scansθmax = 25.0°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −14→14
Tmin = 0.920, Tmax = 0.948k = −15→15
12588 measured reflectionsl = −18→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.057Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.136H-atom parameters constrained
S = 1.18w = 1/[σ2(Fo2) + (0.0662P)2] where P = (Fo2 + 2Fc2)/3
2498 reflections(Δ/σ)max = 0.003
298 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.18097 (9)0.90100 (7)0.96568 (7)0.0490 (3)
O10.3456 (2)0.65755 (17)0.94489 (16)0.0431 (6)
C10.3709 (3)0.7217 (2)0.8770 (2)0.0335 (8)
N10.0836 (3)0.4480 (2)1.0842 (2)0.0543 (9)
S20.03347 (14)1.07464 (9)0.95303 (13)0.1047 (6)
N20.6222 (2)0.7794 (2)0.75337 (19)0.0447 (8)
C20.4781 (3)0.7178 (2)0.8483 (2)0.0361 (9)
H20.52680.67320.87390.043*
C30.5144 (3)0.7802 (2)0.7811 (2)0.0373 (9)
C40.4354 (3)0.8420 (3)0.7425 (2)0.0427 (9)
H40.45510.88150.69510.051*
C50.3288 (3)0.8455 (2)0.7733 (2)0.0412 (9)
H50.27930.88860.74690.049*
C60.2932 (3)0.7864 (2)0.8429 (2)0.0363 (9)
C70.1800 (3)0.7946 (2)0.8827 (2)0.0374 (9)
C80.1525 (3)0.7008 (2)0.9302 (2)0.0353 (9)
C90.0457 (3)0.6738 (2)0.9530 (2)0.0411 (9)
H9−0.01200.71380.93430.049*
C100.0219 (3)0.5917 (2)1.0014 (2)0.0426 (9)
H10−0.05080.57651.01400.051*
C110.1058 (3)0.5296 (2)1.0326 (2)0.0383 (9)
C120.2144 (3)0.5551 (2)1.0098 (2)0.0397 (9)
H120.27250.51521.02810.048*
C130.2346 (3)0.6388 (2)0.9605 (2)0.0352 (8)
C140.0954 (3)0.8293 (3)0.8183 (2)0.0414 (9)
C150.0682 (3)0.7754 (3)0.7464 (2)0.0436 (10)
H150.09630.71170.73870.052*
C16−0.0025 (4)0.8164 (4)0.6842 (3)0.0723 (15)
H16−0.02170.77970.63490.087*
C17−0.0449 (4)0.9130 (4)0.6952 (3)0.0732 (15)
H17−0.08890.94140.65220.088*
C18−0.0212 (4)0.9629 (3)0.7680 (4)0.0721 (15)
H18−0.05191.02540.77700.087*
C190.0501 (3)0.9223 (3)0.8319 (3)0.0472 (10)
C200.0808 (4)0.9700 (3)0.9130 (3)0.0607 (13)
C21−0.0282 (3)0.4250 (3)1.1101 (3)0.0532 (11)
H21A−0.06450.48641.12640.064*
H21B−0.02570.38311.16180.064*
C22−0.0970 (4)0.3734 (3)1.0412 (4)0.0750 (15)
H22A−0.16920.36121.06410.112*
H22B−0.06330.31141.02560.112*
H22C−0.10220.41490.99010.112*
C230.1720 (4)0.3817 (3)1.1151 (3)0.0623 (13)
H23A0.23590.42141.12970.075*
H23B0.14800.34841.16820.075*
C240.2028 (5)0.3077 (4)1.0508 (3)0.0892 (18)
H24A0.26030.26671.07410.134*
H24B0.22830.34020.99860.134*
H24C0.14030.26721.03700.134*
C250.6586 (4)0.8446 (3)0.6825 (3)0.0505 (10)
H25A0.60550.84150.63510.061*
H25B0.72800.82030.66000.061*
C260.6723 (4)0.9514 (3)0.7101 (3)0.0718 (14)
H26A0.69620.99010.66080.108*
H26B0.72610.95540.75590.108*
H26C0.60350.97660.73100.108*
C270.7102 (3)0.7392 (3)0.8084 (3)0.0583 (12)
H27A0.68560.73920.86890.070*
H27B0.77320.78320.80460.070*
C280.7463 (5)0.6358 (4)0.7846 (4)0.0892 (18)
H28A0.80380.61510.82360.134*
H28B0.77290.63530.72540.134*
H28C0.68520.59120.78980.134*
U11U22U33U12U13U23
S10.0632 (6)0.0381 (4)0.0456 (5)−0.0033 (5)0.0015 (5)−0.0066 (5)
O10.0407 (14)0.0447 (13)0.0439 (14)−0.0044 (12)0.0025 (11)0.0169 (12)
C10.046 (2)0.0284 (16)0.0259 (16)−0.0059 (15)0.0015 (15)0.0010 (15)
N10.057 (2)0.0428 (17)0.063 (2)0.0025 (16)0.0204 (17)0.0246 (17)
S20.1242 (12)0.0529 (7)0.1369 (14)0.0229 (8)0.0171 (11)−0.0257 (9)
N20.0458 (18)0.0498 (17)0.0383 (17)−0.0028 (15)0.0085 (15)0.0050 (16)
C20.0407 (19)0.0335 (17)0.0340 (18)−0.0021 (16)−0.0017 (16)−0.0037 (16)
C30.049 (2)0.0358 (17)0.0268 (17)−0.0095 (17)0.0015 (16)−0.0082 (16)
C40.056 (2)0.0413 (19)0.0312 (18)−0.0123 (18)0.0071 (18)0.0065 (17)
C50.053 (2)0.0319 (17)0.0388 (19)0.0003 (17)0.0007 (18)0.0068 (16)
C60.047 (2)0.0271 (16)0.0353 (18)−0.0023 (16)0.0032 (17)0.0005 (16)
C70.046 (2)0.0283 (16)0.0379 (18)−0.0010 (16)0.0036 (17)−0.0013 (15)
C80.043 (2)0.0284 (16)0.0344 (18)−0.0011 (15)0.0058 (16)−0.0031 (15)
C90.044 (2)0.0348 (17)0.045 (2)0.0057 (16)0.0086 (18)0.0004 (18)
C100.041 (2)0.0391 (18)0.048 (2)−0.0040 (18)0.0164 (17)−0.0032 (18)
C110.050 (2)0.0271 (15)0.0372 (18)0.0009 (15)0.0169 (18)0.0004 (16)
C120.048 (2)0.0334 (17)0.038 (2)0.0064 (16)0.0075 (17)0.0059 (16)
C130.0380 (19)0.0349 (17)0.0327 (18)−0.0006 (14)0.0064 (17)0.0017 (17)
C140.042 (2)0.0397 (18)0.043 (2)−0.0059 (17)0.0066 (17)0.0117 (18)
C150.046 (2)0.046 (2)0.039 (2)−0.0100 (18)0.0040 (18)−0.0020 (19)
C160.064 (3)0.104 (4)0.050 (3)−0.019 (3)−0.008 (2)0.003 (3)
C170.049 (3)0.111 (4)0.059 (3)−0.007 (3)−0.008 (2)0.031 (3)
C180.062 (3)0.056 (3)0.098 (4)0.007 (2)0.001 (3)0.026 (3)
C190.049 (2)0.0363 (19)0.056 (2)−0.0017 (17)0.007 (2)0.0137 (19)
C200.057 (3)0.047 (2)0.079 (3)−0.003 (2)0.016 (2)0.007 (2)
C210.067 (3)0.043 (2)0.050 (2)−0.009 (2)0.025 (2)0.0089 (19)
C220.080 (3)0.059 (3)0.086 (3)−0.016 (2)0.013 (3)−0.004 (3)
C230.090 (3)0.047 (2)0.050 (2)−0.012 (2)0.022 (2)0.015 (2)
C240.120 (5)0.078 (3)0.070 (3)0.004 (3)0.013 (3)−0.008 (3)
C250.058 (2)0.056 (2)0.037 (2)−0.001 (2)0.0161 (19)0.0001 (19)
C260.073 (3)0.057 (2)0.086 (3)−0.014 (2)0.030 (3)0.005 (3)
C270.053 (3)0.071 (3)0.051 (2)−0.014 (2)0.012 (2)0.004 (2)
C280.088 (4)0.099 (4)0.081 (4)0.027 (3)−0.011 (3)−0.008 (3)
S1—C201.732 (5)C15—C161.395 (6)
S1—C71.911 (3)C15—H150.9300
O1—C11.383 (4)C16—C171.408 (7)
O1—C131.396 (4)C16—H160.9300
C1—C21.379 (5)C17—C181.329 (7)
C1—C61.388 (5)C17—H170.9300
N1—C111.378 (4)C18—C191.415 (6)
N1—C211.452 (5)C18—H180.9300
N1—C231.476 (6)C19—C201.442 (6)
S2—C201.639 (4)C21—C221.513 (6)
N2—C31.380 (5)C21—H21A0.9700
N2—C251.461 (5)C21—H21B0.9700
N2—C271.465 (5)C22—H22A0.9600
C2—C31.397 (5)C22—H22B0.9600
C2—H20.9300C22—H22C0.9600
C3—C41.401 (5)C23—C241.448 (6)
C4—C51.381 (5)C23—H23A0.9700
C4—H40.9300C23—H23B0.9700
C5—C61.395 (5)C24—H24A0.9600
C5—H50.9300C24—H24B0.9600
C6—C71.510 (5)C24—H24C0.9600
C7—C81.493 (4)C25—C261.506 (6)
C7—C141.499 (5)C25—H25A0.9700
C8—C131.383 (5)C25—H25B0.9700
C8—C91.395 (5)C26—H26A0.9600
C9—C101.360 (5)C26—H26B0.9600
C9—H90.9300C26—H26C0.9600
C10—C111.403 (5)C27—C281.503 (6)
C10—H100.9300C27—H27A0.9700
C11—C121.409 (5)C27—H27B0.9700
C12—C131.376 (5)C28—H28A0.9600
C12—H120.9300C28—H28B0.9600
C14—C151.355 (5)C28—H28C0.9600
C14—C191.384 (5)
C20—S1—C795.16 (19)C18—C17—H17120.5
C1—O1—C13117.2 (3)C16—C17—H17120.5
C2—C1—O1115.2 (3)C17—C18—C19120.9 (4)
C2—C1—C6123.5 (3)C17—C18—H18119.5
O1—C1—C6121.3 (3)C19—C18—H18119.5
C11—N1—C21120.7 (3)C14—C19—C18119.4 (4)
C11—N1—C23121.4 (3)C14—C19—C20115.3 (4)
C21—N1—C23117.9 (3)C18—C19—C20125.3 (4)
C3—N2—C25120.7 (3)C19—C20—S2127.6 (4)
C3—N2—C27121.6 (3)C19—C20—S1110.0 (3)
C25—N2—C27115.1 (3)S2—C20—S1122.4 (3)
C1—C2—C3120.7 (3)N1—C21—C22115.4 (4)
C1—C2—H2119.7N1—C21—H21A108.4
C3—C2—H2119.7C22—C21—H21A108.4
N2—C3—C2121.4 (3)N1—C21—H21B108.4
N2—C3—C4122.0 (3)C22—C21—H21B108.4
C2—C3—C4116.6 (3)H21A—C21—H21B107.5
C5—C4—C3121.5 (3)C21—C22—H22A109.5
C5—C4—H4119.2C21—C22—H22B109.5
C3—C4—H4119.2H22A—C22—H22B109.5
C4—C5—C6122.2 (3)C21—C22—H22C109.5
C4—C5—H5118.9H22A—C22—H22C109.5
C6—C5—H5118.9H22B—C22—H22C109.5
C1—C6—C5115.5 (3)C24—C23—N1112.8 (4)
C1—C6—C7121.2 (3)C24—C23—H23A109.0
C5—C6—C7123.3 (3)N1—C23—H23A109.0
C8—C7—C14115.3 (3)C24—C23—H23B109.0
C8—C7—C6109.8 (3)N1—C23—H23B109.0
C14—C7—C6112.7 (3)H23A—C23—H23B107.8
C8—C7—S1108.3 (2)C23—C24—H24A109.5
C14—C7—S1101.8 (2)C23—C24—H24B109.5
C6—C7—S1108.4 (2)H24A—C24—H24B109.5
C13—C8—C9115.7 (3)C23—C24—H24C109.5
C13—C8—C7120.7 (3)H24A—C24—H24C109.5
C9—C8—C7123.4 (3)H24B—C24—H24C109.5
C10—C9—C8123.0 (3)N2—C25—C26113.5 (3)
C10—C9—H9118.5N2—C25—H25A108.9
C8—C9—H9118.5C26—C25—H25A108.9
C9—C10—C11120.9 (3)N2—C25—H25B108.9
C9—C10—H10119.6C26—C25—H25B108.9
C11—C10—H10119.6H25A—C25—H25B107.7
N1—C11—C10121.7 (3)C25—C26—H26A109.5
N1—C11—C12121.2 (3)C25—C26—H26B109.5
C10—C11—C12117.1 (3)H26A—C26—H26B109.5
C13—C12—C11120.1 (3)C25—C26—H26C109.5
C13—C12—H12120.0H26A—C26—H26C109.5
C11—C12—H12120.0H26B—C26—H26C109.5
C12—C13—C8123.2 (3)N2—C27—C28114.7 (4)
C12—C13—O1114.5 (3)N2—C27—H27A108.6
C8—C13—O1122.3 (3)C28—C27—H27A108.6
C15—C14—C19120.5 (4)N2—C27—H27B108.6
C15—C14—C7122.1 (3)C28—C27—H27B108.6
C19—C14—C7117.2 (3)H27A—C27—H27B107.6
C14—C15—C16119.3 (4)C27—C28—H28A109.5
C14—C15—H15120.4C27—C28—H28B109.5
C16—C15—H15120.4H28A—C28—H28B109.5
C15—C16—C17120.7 (4)C27—C28—H28C109.5
C15—C16—H16119.7H28A—C28—H28C109.5
C17—C16—H16119.7H28B—C28—H28C109.5
C18—C17—C16119.1 (5)
C13—O1—C1—C2−163.2 (3)C9—C10—C11—C12−1.5 (5)
C13—O1—C1—C618.4 (4)N1—C11—C12—C13−177.9 (3)
O1—C1—C2—C3−178.9 (3)C10—C11—C12—C131.3 (5)
C6—C1—C2—C3−0.5 (5)C11—C12—C13—C8−0.8 (5)
C25—N2—C3—C2179.5 (3)C11—C12—C13—O1178.0 (3)
C27—N2—C3—C2−19.7 (5)C9—C8—C13—C120.4 (5)
C25—N2—C3—C40.6 (5)C7—C8—C13—C12175.4 (3)
C27—N2—C3—C4161.4 (3)C9—C8—C13—O1−178.3 (3)
C1—C2—C3—N2178.0 (3)C7—C8—C13—O1−3.3 (5)
C1—C2—C3—C4−3.1 (5)C1—O1—C13—C12162.1 (3)
N2—C3—C4—C5−177.0 (3)C1—O1—C13—C8−19.1 (5)
C2—C3—C4—C54.1 (5)C8—C7—C14—C15−63.5 (4)
C3—C4—C5—C6−1.5 (5)C6—C7—C14—C1563.7 (4)
C2—C1—C6—C53.1 (5)S1—C7—C14—C15179.5 (3)
O1—C1—C6—C5−178.7 (3)C8—C7—C14—C19120.4 (4)
C2—C1—C6—C7−173.9 (3)C6—C7—C14—C19−112.4 (4)
O1—C1—C6—C74.3 (5)S1—C7—C14—C193.5 (4)
C4—C5—C6—C1−2.0 (5)C19—C14—C15—C162.7 (6)
C4—C5—C6—C7174.9 (3)C7—C14—C15—C16−173.2 (4)
C1—C6—C7—C8−24.2 (4)C14—C15—C16—C170.4 (6)
C5—C6—C7—C8159.0 (3)C15—C16—C17—C18−3.3 (7)
C1—C6—C7—C14−154.2 (3)C16—C17—C18—C193.2 (7)
C5—C6—C7—C1429.0 (4)C15—C14—C19—C18−2.9 (6)
C1—C6—C7—S193.9 (3)C7—C14—C19—C18173.2 (4)
C5—C6—C7—S1−82.9 (4)C15—C14—C19—C20176.8 (3)
C20—S1—C7—C8−121.4 (3)C7—C14—C19—C20−7.0 (5)
C20—S1—C7—C140.6 (3)C17—C18—C19—C14−0.1 (7)
C20—S1—C7—C6119.6 (3)C17—C18—C19—C20−179.8 (4)
C14—C7—C8—C13152.1 (3)C14—C19—C20—S2−173.9 (3)
C6—C7—C8—C1323.5 (4)C18—C19—C20—S25.8 (6)
S1—C7—C8—C13−94.6 (3)C14—C19—C20—S17.0 (5)
C14—C7—C8—C9−33.2 (5)C18—C19—C20—S1−173.3 (4)
C6—C7—C8—C9−161.8 (3)C7—S1—C20—C19−4.1 (3)
S1—C7—C8—C980.0 (4)C7—S1—C20—S2176.8 (3)
C13—C8—C9—C10−0.5 (5)C11—N1—C21—C2279.6 (5)
C7—C8—C9—C10−175.4 (3)C23—N1—C21—C22−100.7 (4)
C8—C9—C10—C111.1 (5)C11—N1—C23—C24−83.3 (5)
C21—N1—C11—C10−1.7 (5)C21—N1—C23—C2497.0 (5)
C23—N1—C11—C10178.6 (3)C3—N2—C25—C2676.0 (5)
C21—N1—C11—C12177.5 (4)C27—N2—C25—C26−85.9 (4)
C23—N1—C11—C12−2.2 (5)C3—N2—C27—C28100.4 (4)
C9—C10—C11—N1177.8 (3)C25—N2—C27—C28−97.8 (4)
D—H···AD—HH···AD···AD—H···A
C17—H17···Cgi0.933.143.961 (5)149
  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A highly specific BODIPY-based fluorescent probe for the detection of hypochlorous acid.

Authors:  Zhen-Ning Sun; Feng-Qin Liu; Yan Chen; Paul Kwong Hang Tam; Dan Yang
Journal:  Org Lett       Date:  2008-05-01       Impact factor: 6.005

  2 in total

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