| Literature DB >> 21580911 |
Abstract
A new mononuclear cobalt(II) complex,Entities:
Year: 2008 PMID: 21580911 PMCID: PMC2959662 DOI: 10.1107/S1600536808034880
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C6H4N5)2(H2O)4]·2H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 1859 reflections | |
| θ = 2.7–26.3° | |
| µ = 0.95 mm−1 | |
| α = 91.406 (3)° | |
| β = 90.482 (3)° | Block, red |
| γ = 100.953 (3)° | 0.20 × 0.20 × 0.14 mm |
| Bruker SMART CCD area-detector diffractometer | 1684 independent reflections |
| Radiation source: fine-focus sealed tube | 1562 reflections with |
| graphite | |
| phi and ω scans | θmax = 25.0°, θmin = 2.4° |
| Absorption correction: multi-scan (SADABS; Sheldrick 1996) | |
| 2456 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 1684 reflections | (Δ/σ)max < 0.001 |
| 157 parameters | Δρmax = 0.49 e Å−3 |
| 9 restraints | Δρmin = −0.28 e Å−3 |
| Co1 | 0.5000 | 0.5000 | 0.0000 | 0.02432 (16) | |
| O1 | 0.6737 (2) | 0.6584 (2) | 0.16137 (19) | 0.0330 (4) | |
| O2 | 0.7102 (3) | 0.3451 (2) | −0.0278 (2) | 0.0372 (4) | |
| N1 | 0.3835 (3) | 0.3267 (2) | 0.1789 (2) | 0.0285 (4) | |
| N2 | 0.2607 (3) | 0.0110 (3) | 0.6942 (2) | 0.0334 (5) | |
| N3 | 0.2040 (3) | −0.1406 (3) | 0.7653 (2) | 0.0371 (5) | |
| N4 | 0.1459 (3) | −0.2640 (3) | 0.6620 (2) | 0.0376 (5) | |
| N5 | 0.1617 (3) | −0.1980 (3) | 0.5206 (2) | 0.0343 (5) | |
| C1 | 0.3706 (4) | 0.3835 (3) | 0.3237 (3) | 0.0353 (6) | |
| H1 | 0.3975 | 0.5034 | 0.3441 | 0.042* | |
| C2 | 0.3196 (4) | 0.2748 (3) | 0.4445 (3) | 0.0372 (6) | |
| H2 | 0.3120 | 0.3213 | 0.5435 | 0.045* | |
| C3 | 0.2795 (3) | 0.0948 (3) | 0.4185 (3) | 0.0265 (5) | |
| C4 | 0.2848 (5) | 0.0366 (3) | 0.2677 (3) | 0.0443 (7) | |
| H4 | 0.2542 | −0.0823 | 0.2433 | 0.053* | |
| C5 | 0.3357 (5) | 0.1551 (3) | 0.1530 (3) | 0.0445 (7) | |
| H5 | 0.3366 | 0.1127 | 0.0519 | 0.053* | |
| C6 | 0.2333 (3) | −0.0290 (3) | 0.5441 (3) | 0.0271 (5) | |
| O3 | 0.0218 (2) | 0.5988 (2) | 0.25348 (19) | 0.0332 (4) | |
| H1A | 0.670 (4) | 0.7610 (19) | 0.197 (3) | 0.044 (8)* | |
| H1B | 0.782 (3) | 0.629 (4) | 0.170 (4) | 0.073 (12)* | |
| H2A | 0.736 (4) | 0.276 (3) | 0.040 (2) | 0.043 (8)* | |
| H2B | 0.794 (3) | 0.372 (4) | −0.096 (3) | 0.056 (10)* | |
| H3A | 0.066 (4) | 0.662 (3) | 0.332 (2) | 0.040 (8)* | |
| H3B | −0.018 (4) | 0.4918 (15) | 0.272 (3) | 0.052 (9)* |
| Co1 | 0.0335 (3) | 0.0211 (2) | 0.0174 (2) | 0.00208 (17) | 0.00210 (16) | 0.00325 (16) |
| O1 | 0.0416 (10) | 0.0277 (9) | 0.0283 (9) | 0.0039 (7) | −0.0052 (7) | −0.0036 (7) |
| O2 | 0.0474 (11) | 0.0395 (10) | 0.0289 (10) | 0.0169 (8) | 0.0099 (8) | 0.0130 (8) |
| N1 | 0.0362 (10) | 0.0248 (10) | 0.0229 (10) | 0.0014 (8) | 0.0022 (8) | 0.0034 (8) |
| N2 | 0.0459 (12) | 0.0276 (11) | 0.0247 (11) | 0.0016 (9) | −0.0018 (9) | 0.0068 (8) |
| N3 | 0.0489 (13) | 0.0325 (11) | 0.0279 (11) | 0.0019 (9) | −0.0012 (9) | 0.0104 (9) |
| N4 | 0.0499 (13) | 0.0291 (11) | 0.0313 (12) | −0.0004 (9) | −0.0018 (9) | 0.0121 (9) |
| N5 | 0.0469 (12) | 0.0264 (11) | 0.0267 (11) | −0.0010 (9) | −0.0011 (9) | 0.0078 (8) |
| C1 | 0.0497 (15) | 0.0245 (12) | 0.0282 (13) | −0.0019 (10) | 0.0027 (11) | 0.0028 (10) |
| C2 | 0.0527 (16) | 0.0340 (14) | 0.0217 (12) | −0.0001 (11) | 0.0022 (11) | 0.0016 (10) |
| C3 | 0.0282 (11) | 0.0259 (12) | 0.0245 (11) | 0.0026 (9) | 0.0013 (9) | 0.0063 (9) |
| C4 | 0.077 (2) | 0.0223 (13) | 0.0296 (14) | −0.0022 (12) | 0.0049 (13) | 0.0022 (10) |
| C5 | 0.077 (2) | 0.0301 (14) | 0.0217 (12) | −0.0012 (13) | 0.0043 (12) | 0.0026 (10) |
| C6 | 0.0280 (11) | 0.0275 (12) | 0.0254 (11) | 0.0040 (9) | 0.0000 (9) | 0.0057 (9) |
| O3 | 0.0422 (10) | 0.0260 (9) | 0.0292 (9) | 0.0002 (8) | 0.0012 (7) | 0.0040 (7) |
| Co1—O1i | 2.0855 (16) | N3—N4 | 1.304 (3) |
| Co1—O1 | 2.0855 (16) | N4—N5 | 1.339 (3) |
| Co1—O2 | 2.1220 (17) | N5—C6 | 1.331 (3) |
| Co1—O2i | 2.1220 (17) | C1—C2 | 1.372 (3) |
| Co1—N1 | 2.1520 (19) | C1—H1 | 0.9300 |
| Co1—N1i | 2.1521 (19) | C2—C3 | 1.391 (3) |
| O1—H1A | 0.855 (10) | C2—H2 | 0.9300 |
| O1—H1B | 0.857 (10) | C3—C4 | 1.377 (3) |
| O2—H2A | 0.849 (10) | C3—C6 | 1.471 (3) |
| O2—H2B | 0.851 (10) | C4—C5 | 1.378 (4) |
| N1—C5 | 1.331 (3) | C4—H4 | 0.9300 |
| N1—C1 | 1.331 (3) | C5—H5 | 0.9300 |
| N2—C6 | 1.334 (3) | O3—H3A | 0.853 (10) |
| N2—N3 | 1.342 (3) | O3—H3B | 0.849 (10) |
| O1i—Co1—O2 | 90.42 (7) | N4—N3—N2 | 109.21 (19) |
| O1—Co1—O2 | 89.58 (7) | N3—N4—N5 | 109.94 (19) |
| O1i—Co1—O2i | 89.58 (7) | C6—N5—N4 | 104.62 (19) |
| O1—Co1—O2i | 90.42 (7) | N1—C1—C2 | 123.5 (2) |
| O1i—Co1—N1 | 89.50 (7) | N1—C1—H1 | 118.2 |
| O1—Co1—N1 | 90.50 (7) | C2—C1—H1 | 118.2 |
| O2—Co1—N1 | 87.51 (7) | C1—C2—C3 | 119.9 (2) |
| O2i—Co1—N1 | 92.49 (7) | C1—C2—H2 | 120.1 |
| O1i—Co1—N1i | 90.50 (7) | C3—C2—H2 | 120.1 |
| O1—Co1—N1i | 89.50 (7) | C4—C3—C2 | 116.5 (2) |
| O2—Co1—N1i | 92.49 (7) | C4—C3—C6 | 121.0 (2) |
| O2i—Co1—N1i | 87.51 (7) | C2—C3—C6 | 122.5 (2) |
| Co1—O1—H1A | 130.6 (18) | C3—C4—C5 | 119.8 (2) |
| Co1—O1—H1B | 112 (2) | C3—C4—H4 | 120.1 |
| H1A—O1—H1B | 114.2 (17) | C5—C4—H4 | 120.1 |
| Co1—O2—H2A | 123.1 (17) | N1—C5—C4 | 123.7 (2) |
| Co1—O2—H2B | 118.7 (18) | N1—C5—H5 | 118.2 |
| H2A—O2—H2B | 115.9 (17) | C4—C5—H5 | 118.2 |
| C5—N1—C1 | 116.5 (2) | N5—C6—N2 | 111.4 (2) |
| C5—N1—Co1 | 121.48 (16) | N5—C6—C3 | 123.4 (2) |
| C1—N1—Co1 | 121.77 (16) | N2—C6—C3 | 125.1 (2) |
| C6—N2—N3 | 104.82 (19) | H3A—O3—H3B | 114.8 (16) |
| H··· | ||||
| O1—H1A···N2ii | 0.86 (1) | 1.97 (1) | 2.795 (3) | 162 (1) |
| O1—H1B···O3iii | 0.86 (1) | 1.93 (1) | 2.753 (3) | 162 (1) |
| O2—H2A···N3iv | 0.85 (1) | 2.10 (1) | 2.939 (3) | 171 (1) |
| O2—H2B···O3i | 0.85 (1) | 1.90 (1) | 2.745 (3) | 172 (1) |
| O3—H3A···N5v | 0.85 (1) | 1.99 (1) | 2.840 (3) | 178 (1) |
| O3—H3B···N4vi | 0.85 (1) | 1.94 (1) | 2.780 (3) | 169 (1) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.855 (10) | 1.968 (10) | 2.795 (3) | 161.84 (3) |
| O1—H1 | 0.857 (10) | 1.93 (1) | 2.753 (3) | 161.83 (3) |
| O2—H2 | 0.849 (10) | 2.10 (1) | 2.939 (3) | 170.66 (3) |
| O2—H2 | 0.851 (3) | 1.90 (1) | 2.745 (3) | 172.44 (3) |
| O3—H3 | 0.853 (10) | 1.99 (1) | 2.840 (3) | 177.52 (3) |
| O3—H3 | 0.849 (10) | 1.942 (10) | 2.780 (3) | 168.93 (3) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .