| Literature DB >> 21580766 |
Hoong-Kun Fun, Jia Hao Goh, Haitao Yu, Yan Zhang.
Abstract
In the title isoquinoline-dione compound, C(16)H(16)N(2)O(3)S, the piperidine ring in the tetra-hydro-isoquinoline ring system adopts a half-boat conformation. The essentially planar thia-zole ring [maximum deviation = 0.007 (2) Å] makes a dihedral angle of 34.49 (7)° with the mean plane through the tetra-hydro-isoquinoline ring system. In the crystal structure, two neighbouring mol-ecules are linked via pairs of O-H⋯N and C-H⋯O hydrogen bonds into inversion-related dimers incorporating R(2) (2)(9) hydrogen-bond ring motifs. These dimers are further linked by weak inter-molecular C-H⋯π inter-actions.Entities:
Year: 2010 PMID: 21580766 PMCID: PMC2983771 DOI: 10.1107/S1600536810011141
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H16N2O3S | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 9047 reflections |
| θ = 5.1–67.1° | |
| µ = 2.14 mm−1 | |
| β = 114.304 (1)° | Block, colourless |
| 0.32 × 0.19 × 0.12 mm | |
| Bruker SMART APEX DUO CCD area-detector diffractometer | 2343 independent reflections |
| Radiation source: fine-focus sealed tube | 2311 reflections with |
| none | |
| φ and ω scans | θmax = 65.0°, θmin = 5.1° |
| Absorption correction: multi-scan ( | |
| 22926 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| (Δ/σ)max = 0.001 | |
| 2343 reflections | Δρmax = 0.87 e Å−3 |
| 264 parameters | Δρmin = −1.01 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.034 (2) |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 1.09845 (5) | 0.83482 (4) | 1.10440 (3) | 0.0194 (3) | |
| O1 | 0.38500 (16) | 0.80117 (12) | 1.02541 (8) | 0.0215 (4) | |
| O2 | 0.82233 (18) | 0.52224 (13) | 1.07705 (8) | 0.0275 (4) | |
| O3 | 0.33049 (17) | 0.82715 (12) | 0.86199 (8) | 0.0201 (4) | |
| N1 | 0.6048 (2) | 0.66140 (13) | 1.05324 (10) | 0.0176 (4) | |
| N2 | 0.80660 (19) | 0.91667 (14) | 1.08986 (9) | 0.0182 (4) | |
| C1 | 0.4850 (2) | 0.74898 (16) | 1.00286 (11) | 0.0174 (4) | |
| C2 | 0.7103 (2) | 0.58819 (16) | 1.02692 (11) | 0.0190 (4) | |
| C3 | 0.6699 (2) | 0.58984 (16) | 0.93626 (11) | 0.0178 (4) | |
| C4 | 0.7471 (2) | 0.49838 (17) | 0.90499 (12) | 0.0205 (4) | |
| C5 | 0.7076 (2) | 0.49498 (17) | 0.82010 (12) | 0.0229 (5) | |
| C6 | 0.5912 (3) | 0.58198 (18) | 0.76658 (12) | 0.0220 (4) | |
| C7 | 0.5162 (2) | 0.67391 (17) | 0.79782 (12) | 0.0200 (4) | |
| C8 | 0.5556 (2) | 0.67879 (16) | 0.88301 (12) | 0.0172 (4) | |
| C9 | 0.4934 (2) | 0.78679 (17) | 0.92028 (11) | 0.0171 (4) | |
| C10 | 0.6204 (2) | 0.90246 (16) | 0.93867 (11) | 0.0164 (4) | |
| C11 | 0.7918 (2) | 0.88586 (16) | 1.00992 (11) | 0.0166 (4) | |
| C12 | 0.9358 (2) | 0.84040 (15) | 1.00461 (12) | 0.0177 (4) | |
| C13 | 0.9603 (2) | 0.89292 (17) | 1.14552 (11) | 0.0195 (4) | |
| C14 | 0.6343 (3) | 0.65094 (18) | 1.14136 (12) | 0.0208 (5) | |
| C15 | 0.9659 (3) | 0.8009 (2) | 0.92990 (12) | 0.0209 (4) | |
| C16 | 1.0194 (3) | 0.9151 (2) | 1.23738 (12) | 0.0266 (5) | |
| H4A | 0.824 (3) | 0.439 (2) | 0.9426 (14) | 0.023 (5)* | |
| H5A | 0.762 (3) | 0.433 (2) | 0.7991 (15) | 0.032 (6)* | |
| H6A | 0.563 (3) | 0.581 (2) | 0.7073 (15) | 0.026 (6)* | |
| H7A | 0.439 (3) | 0.736 (2) | 0.7631 (15) | 0.027 (6)* | |
| H10A | 0.564 (3) | 0.975 (2) | 0.9491 (13) | 0.018 (5)* | |
| H10B | 0.633 (3) | 0.9172 (19) | 0.8877 (14) | 0.016 (5)* | |
| H14A | 0.541 (4) | 0.692 (3) | 1.1484 (17) | 0.040 (7)* | |
| H14B | 0.634 (3) | 0.561 (2) | 1.1555 (14) | 0.025 (5)* | |
| H14C | 0.729 (4) | 0.693 (3) | 1.1756 (17) | 0.033 (6)* | |
| H15A | 0.988 (3) | 0.711 (3) | 0.9309 (17) | 0.041 (7)* | |
| H15B | 1.058 (3) | 0.850 (2) | 0.9259 (16) | 0.033 (6)* | |
| H15C | 0.869 (4) | 0.820 (3) | 0.8790 (19) | 0.043 (7)* | |
| H16A | 1.029 (4) | 1.003 (3) | 1.2454 (19) | 0.056 (9)* | |
| H16B | 0.939 (4) | 0.885 (3) | 1.2568 (18) | 0.046 (7)* | |
| H16C | 1.133 (4) | 0.878 (3) | 1.270 (2) | 0.050 (8)* | |
| H1O3 | 0.297 (4) | 0.889 (3) | 0.8823 (19) | 0.050 (8)* |
| S1 | 0.0153 (4) | 0.0216 (4) | 0.0198 (4) | 0.00071 (15) | 0.0057 (2) | −0.00131 (15) |
| O1 | 0.0209 (7) | 0.0208 (7) | 0.0262 (7) | 0.0007 (5) | 0.0131 (6) | −0.0012 (5) |
| O2 | 0.0293 (8) | 0.0307 (8) | 0.0218 (7) | 0.0109 (6) | 0.0097 (6) | 0.0053 (6) |
| O3 | 0.0146 (7) | 0.0226 (7) | 0.0198 (7) | 0.0032 (5) | 0.0037 (6) | 0.0003 (5) |
| N1 | 0.0189 (9) | 0.0167 (8) | 0.0171 (8) | −0.0009 (6) | 0.0075 (7) | −0.0003 (5) |
| N2 | 0.0184 (9) | 0.0172 (8) | 0.0187 (8) | −0.0018 (6) | 0.0072 (6) | −0.0016 (6) |
| C1 | 0.0160 (9) | 0.0146 (8) | 0.0206 (9) | −0.0036 (7) | 0.0067 (7) | −0.0025 (7) |
| C2 | 0.0188 (10) | 0.0159 (9) | 0.0223 (10) | −0.0005 (7) | 0.0085 (8) | 0.0004 (7) |
| C3 | 0.0173 (10) | 0.0161 (9) | 0.0209 (9) | −0.0035 (7) | 0.0086 (7) | −0.0013 (7) |
| C4 | 0.0216 (10) | 0.0171 (9) | 0.0247 (9) | −0.0003 (7) | 0.0112 (8) | 0.0009 (7) |
| C5 | 0.0278 (11) | 0.0181 (9) | 0.0280 (10) | −0.0042 (8) | 0.0167 (8) | −0.0054 (7) |
| C6 | 0.0273 (11) | 0.0214 (9) | 0.0197 (9) | −0.0079 (7) | 0.0122 (8) | −0.0039 (7) |
| C7 | 0.0202 (11) | 0.0187 (9) | 0.0201 (10) | −0.0032 (7) | 0.0073 (8) | 0.0005 (7) |
| C8 | 0.0147 (10) | 0.0166 (9) | 0.0203 (9) | −0.0043 (6) | 0.0073 (7) | −0.0020 (7) |
| C9 | 0.0133 (9) | 0.0182 (9) | 0.0176 (9) | −0.0002 (7) | 0.0043 (7) | 0.0000 (7) |
| C10 | 0.0173 (10) | 0.0144 (9) | 0.0175 (9) | 0.0001 (7) | 0.0071 (8) | 0.0007 (7) |
| C11 | 0.0179 (10) | 0.0130 (9) | 0.0188 (9) | −0.0018 (6) | 0.0075 (7) | 0.0001 (6) |
| C12 | 0.0169 (10) | 0.0145 (9) | 0.0206 (10) | −0.0027 (6) | 0.0066 (8) | −0.0002 (6) |
| C13 | 0.0180 (10) | 0.0185 (9) | 0.0221 (9) | −0.0017 (7) | 0.0083 (7) | −0.0017 (7) |
| C14 | 0.0256 (12) | 0.0205 (10) | 0.0173 (10) | −0.0019 (8) | 0.0098 (9) | 0.0001 (7) |
| C15 | 0.0187 (10) | 0.0234 (10) | 0.0218 (10) | −0.0010 (8) | 0.0095 (8) | −0.0012 (8) |
| C16 | 0.0220 (11) | 0.0356 (12) | 0.0202 (10) | 0.0005 (9) | 0.0065 (9) | −0.0045 (8) |
| S1—C13 | 1.7317 (18) | C6—H6A | 0.97 (2) |
| S1—C12 | 1.7337 (19) | C7—C8 | 1.391 (3) |
| O1—C1 | 1.212 (2) | C7—H7A | 0.95 (3) |
| O2—C2 | 1.215 (2) | C8—C9 | 1.508 (2) |
| O3—C9 | 1.414 (2) | C9—C10 | 1.569 (2) |
| O3—H1O3 | 0.84 (3) | C10—C11 | 1.497 (2) |
| N1—C1 | 1.388 (2) | C10—H10A | 0.95 (2) |
| N1—C2 | 1.400 (2) | C10—H10B | 0.96 (2) |
| N1—C14 | 1.465 (2) | C11—C12 | 1.363 (3) |
| N2—C13 | 1.301 (2) | C12—C15 | 1.495 (3) |
| N2—C11 | 1.393 (2) | C13—C16 | 1.495 (3) |
| C1—C9 | 1.532 (2) | C14—H14A | 0.96 (3) |
| C2—C3 | 1.482 (3) | C14—H14B | 0.97 (3) |
| C3—C8 | 1.394 (3) | C14—H14C | 0.90 (3) |
| C3—C4 | 1.397 (3) | C15—H15A | 0.95 (3) |
| C4—C5 | 1.386 (3) | C15—H15B | 0.97 (3) |
| C4—H4A | 0.95 (2) | C15—H15C | 0.96 (3) |
| C5—C6 | 1.390 (3) | C16—H16A | 0.93 (3) |
| C5—H5A | 0.96 (3) | C16—H16B | 0.94 (3) |
| C6—C7 | 1.388 (3) | C16—H16C | 0.98 (3) |
| C13—S1—C12 | 90.28 (9) | C1—C9—C10 | 107.64 (14) |
| C9—O3—H1O3 | 109 (2) | C11—C10—C9 | 116.27 (14) |
| C1—N1—C2 | 124.01 (15) | C11—C10—H10A | 109.3 (13) |
| C1—N1—C14 | 118.86 (15) | C9—C10—H10A | 106.8 (13) |
| C2—N1—C14 | 116.94 (15) | C11—C10—H10B | 110.6 (13) |
| C13—N2—C11 | 110.88 (15) | C9—C10—H10B | 105.4 (13) |
| O1—C1—N1 | 121.76 (16) | H10A—C10—H10B | 108.0 (17) |
| O1—C1—C9 | 120.54 (16) | C12—C11—N2 | 116.10 (16) |
| N1—C1—C9 | 117.49 (15) | C12—C11—C10 | 126.12 (16) |
| O2—C2—N1 | 119.78 (16) | N2—C11—C10 | 117.76 (15) |
| O2—C2—C3 | 123.34 (16) | C11—C12—C15 | 130.18 (18) |
| N1—C2—C3 | 116.76 (15) | C11—C12—S1 | 108.55 (14) |
| C8—C3—C4 | 120.56 (17) | C15—C12—S1 | 121.27 (14) |
| C8—C3—C2 | 121.10 (16) | N2—C13—C16 | 124.69 (17) |
| C4—C3—C2 | 118.33 (16) | N2—C13—S1 | 114.19 (13) |
| C5—C4—C3 | 119.64 (17) | C16—C13—S1 | 121.11 (14) |
| C5—C4—H4A | 121.7 (13) | N1—C14—H14A | 108.1 (17) |
| C3—C4—H4A | 118.7 (13) | N1—C14—H14B | 108.9 (13) |
| C4—C5—C6 | 119.94 (17) | H14A—C14—H14B | 108 (2) |
| C4—C5—H5A | 119.3 (15) | N1—C14—H14C | 112.7 (16) |
| C6—C5—H5A | 120.7 (15) | H14A—C14—H14C | 105 (2) |
| C7—C6—C5 | 120.40 (17) | H14B—C14—H14C | 113 (2) |
| C7—C6—H6A | 118.9 (13) | C12—C15—H15A | 111.0 (16) |
| C5—C6—H6A | 120.7 (13) | C12—C15—H15B | 111.1 (15) |
| C6—C7—C8 | 120.17 (17) | H15A—C15—H15B | 111 (2) |
| C6—C7—H7A | 122.3 (14) | C12—C15—H15C | 111.2 (17) |
| C8—C7—H7A | 117.5 (14) | H15A—C15—H15C | 108 (2) |
| C7—C8—C3 | 119.26 (16) | H15B—C15—H15C | 104 (2) |
| C7—C8—C9 | 121.39 (16) | C13—C16—H16A | 106.6 (19) |
| C3—C8—C9 | 118.99 (16) | C13—C16—H16B | 111.3 (18) |
| O3—C9—C8 | 109.28 (15) | H16A—C16—H16B | 108 (3) |
| O3—C9—C1 | 110.12 (14) | C13—C16—H16C | 112.4 (18) |
| C8—C9—C1 | 112.37 (14) | H16A—C16—H16C | 107 (3) |
| O3—C9—C10 | 108.37 (14) | H16B—C16—H16C | 111 (3) |
| C8—C9—C10 | 108.97 (14) | ||
| C2—N1—C1—O1 | 172.72 (16) | C3—C8—C9—C1 | −30.6 (2) |
| C14—N1—C1—O1 | −12.4 (2) | C7—C8—C9—C10 | −84.4 (2) |
| C2—N1—C1—C9 | −12.5 (2) | C3—C8—C9—C10 | 88.64 (19) |
| C14—N1—C1—C9 | 162.30 (16) | O1—C1—C9—O3 | −30.9 (2) |
| C1—N1—C2—O2 | 173.39 (17) | N1—C1—C9—O3 | 154.29 (15) |
| C14—N1—C2—O2 | −1.5 (2) | O1—C1—C9—C8 | −152.96 (16) |
| C1—N1—C2—C3 | −10.5 (2) | N1—C1—C9—C8 | 32.2 (2) |
| C14—N1—C2—C3 | 174.59 (15) | O1—C1—C9—C10 | 87.05 (19) |
| O2—C2—C3—C8 | −171.67 (18) | N1—C1—C9—C10 | −87.76 (18) |
| N1—C2—C3—C8 | 12.4 (2) | O3—C9—C10—C11 | 169.71 (14) |
| O2—C2—C3—C4 | 9.4 (3) | C8—C9—C10—C11 | −71.47 (19) |
| N1—C2—C3—C4 | −166.57 (16) | C1—C9—C10—C11 | 50.6 (2) |
| C8—C3—C4—C5 | −0.9 (3) | C13—N2—C11—C12 | −1.1 (2) |
| C2—C3—C4—C5 | 177.98 (16) | C13—N2—C11—C10 | 177.57 (15) |
| C3—C4—C5—C6 | −0.3 (3) | C9—C10—C11—C12 | 92.3 (2) |
| C4—C5—C6—C7 | 1.1 (3) | C9—C10—C11—N2 | −86.14 (19) |
| C5—C6—C7—C8 | −0.7 (3) | N2—C11—C12—C15 | −178.82 (17) |
| C6—C7—C8—C3 | −0.5 (3) | C10—C11—C12—C15 | 2.7 (3) |
| C6—C7—C8—C9 | 172.49 (17) | N2—C11—C12—S1 | 0.32 (19) |
| C4—C3—C8—C7 | 1.4 (3) | C10—C11—C12—S1 | −178.19 (14) |
| C2—C3—C8—C7 | −177.54 (16) | C13—S1—C12—C11 | 0.35 (13) |
| C4—C3—C8—C9 | −171.82 (16) | C13—S1—C12—C15 | 179.58 (15) |
| C2—C3—C8—C9 | 9.3 (2) | C11—N2—C13—C16 | 179.99 (17) |
| C7—C8—C9—O3 | 33.9 (2) | C11—N2—C13—S1 | 1.32 (19) |
| C3—C8—C9—O3 | −153.11 (15) | C12—S1—C13—N2 | −1.00 (14) |
| C7—C8—C9—C1 | 156.42 (16) | C12—S1—C13—C16 | −179.72 (16) |
| Cg1 and Cg2 are the centroids of the C3–C8 benzene ring and the C11/C12/S1/C13/N2 thiazol ring, respectively. |
| H··· | ||||
| O3—H1O3···N2i | 0.84 (3) | 2.35 (3) | 3.174 (2) | 167 (3) |
| C10—H10A···O1i | 0.96 (2) | 2.39 (2) | 3.163 (2) | 138 (2) |
| C14—H14B···Cg1ii | 0.97 (3) | 2.71 (3) | 3.403 (2) | 129 (2) |
| C15—H15B···Cg2iii | 0.97 (3) | 2.89 (2) | 3.537 (2) | 125.4 (18) |
Hydrogen-bond geometry (Å, °)
Cg1 and Cg2 are the centroids of the C3–C8 benzene ring and the C11/C12/S1/C13/N2 thiazol ring, respectively.
| H⋯ | ||||
|---|---|---|---|---|
| O3—H1 | 0.84 (3) | 2.35 (3) | 3.174 (2) | 167 (3) |
| C10—H10 | 0.96 (2) | 2.39 (2) | 3.163 (2) | 138 (2) |
| C14—H14 | 0.97 (3) | 2.71 (3) | 3.403 (2) | 129 (2) |
| C15—H15 | 0.97 (3) | 2.89 (2) | 3.537 (2) | 125.4 (18) |
Symmetry codes: (i) ; (ii) ; (iii) .