Literature DB >> 21580747

4-[(2,4-Dimethyl-thia-zol-5-yl)meth-yl]-4-hydr-oxy-2-methyl-isoquinoline-1,3(2H,4H)-dione.

Hoong-Kun Fun, Jia Hao Goh, Haitao Yu, Yan Zhang.   

Abstract

In the title isoquinoline-dione derivative, C(16)H(16)N(2)O(3)S, the piperidine ring in the tetra-hydro-isoquinoline ring system adopts a distorted envelope conformation. The thia-zole ring is essentially planar [maximum deviation = 0.004 (1) Å] and is inclined at a dihedral angle of 31.08 (3)° with respect to the mean plane through the tetra-hydro-isoquinoline ring system. In the crystal structure, inter-molecular O-H⋯O and C-H⋯O inter-actions link adjacent mol-ecules into a three-dimensional extended network. The crystal structure is further stabilized by weak C-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21580747      PMCID: PMC2984028          DOI: 10.1107/S1600536810010469

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to and applications of isoquinoline­dione derivatives, see: Griesbeck et al. (2003 ▶); Hall et al. (1994 ▶); Malamas & Hohman (1994 ▶); Suau & Villatoro (1994 ▶); Zhang et al. (2004 ▶). For ring conformations, see: Cremer & Pople (1975 ▶). For related structures, see: Fun et al. (2010 ▶); Wang et al. (2000 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C16H16N2O3S M = 316.37 Monoclinic, a = 10.2424 (8) Å b = 15.0438 (13) Å c = 9.4786 (8) Å β = 92.839 (2)° V = 1458.7 (2) Å3 Z = 4 Mo Kα radiation μ = 0.24 mm−1 T = 100 K 0.52 × 0.26 × 0.09 mm

Data collection

Bruker SMART APEX DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.887, T max = 0.979 20742 measured reflections 5260 independent reflections 4752 reflections with I > 2σ(I) R int = 0.024

Refinement

R[F 2 > 2σ(F 2)] = 0.031 wR(F 2) = 0.108 S = 1.14 5260 reflections 263 parameters All H-atom parameters refined Δρmax = 0.69 e Å−3 Δρmin = −0.47 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810010469/is2531sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810010469/is2531Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H16N2O3SF(000) = 664
Mr = 316.37Dx = 1.441 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9887 reflections
a = 10.2424 (8) Åθ = 2.5–35.1°
b = 15.0438 (13) ŵ = 0.24 mm1
c = 9.4786 (8) ÅT = 100 K
β = 92.839 (2)°Block, colourless
V = 1458.7 (2) Å30.52 × 0.26 × 0.09 mm
Z = 4
Bruker SMART APEX DUO CCD area-detector diffractometer5260 independent reflections
Radiation source: fine-focus sealed tube4752 reflections with I > 2σ(I)
graphiteRint = 0.024
φ and ω scansθmax = 32.5°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −15→15
Tmin = 0.887, Tmax = 0.979k = −21→22
20742 measured reflectionsl = −14→13
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.031Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.108All H-atom parameters refined
S = 1.14w = 1/[σ2(Fo2) + (0.0649P)2 + 0.2915P] where P = (Fo2 + 2Fc2)/3
5260 reflections(Δ/σ)max = 0.001
263 parametersΔρmax = 0.69 e Å3
0 restraintsΔρmin = −0.47 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.86697 (2)0.201051 (14)0.69225 (2)0.01443 (7)
O10.38478 (7)0.29484 (4)0.78648 (8)0.01610 (14)
O20.46407 (7)0.59074 (5)0.82383 (8)0.01766 (14)
O30.57054 (7)0.27421 (4)0.59312 (7)0.01403 (13)
N10.42666 (7)0.44221 (5)0.81117 (8)0.01168 (13)
N21.03523 (7)0.32678 (5)0.71641 (8)0.01323 (14)
C10.45580 (8)0.35744 (5)0.76386 (9)0.01077 (14)
C20.49293 (8)0.51881 (6)0.77347 (9)0.01180 (14)
C30.59432 (8)0.50884 (5)0.66814 (9)0.01079 (14)
C40.64725 (9)0.58622 (6)0.61172 (10)0.01449 (16)
C50.73988 (9)0.57934 (6)0.51012 (10)0.01681 (17)
C60.77833 (9)0.49566 (6)0.46357 (10)0.01545 (16)
C70.72519 (9)0.41869 (6)0.51860 (9)0.01266 (15)
C80.63326 (8)0.42498 (5)0.62248 (8)0.01004 (14)
C90.58517 (8)0.34274 (5)0.69351 (8)0.00987 (14)
C100.68361 (8)0.31399 (6)0.81709 (9)0.01249 (15)
C110.81935 (8)0.29894 (5)0.77079 (9)0.01180 (15)
C120.92179 (8)0.35759 (6)0.77307 (9)0.01249 (15)
C131.02070 (8)0.24530 (6)0.66982 (9)0.01282 (15)
C140.31069 (9)0.45045 (6)0.89534 (10)0.01658 (17)
C150.92066 (10)0.45085 (7)0.82696 (11)0.01856 (18)
C161.12481 (9)0.19431 (6)0.59986 (11)0.01685 (17)
H4A0.6166 (16)0.6451 (12)0.6429 (18)0.032 (4)*
H5A0.7767 (17)0.6330 (12)0.4682 (18)0.032 (4)*
H6A0.8450 (15)0.4910 (11)0.3912 (16)0.022 (4)*
H7A0.7529 (14)0.3644 (11)0.4837 (16)0.022 (4)*
H10A0.6458 (14)0.2612 (11)0.8585 (15)0.020 (3)*
H10B0.6861 (14)0.3595 (10)0.8887 (15)0.018 (3)*
H14A0.2427 (16)0.4203 (11)0.8507 (16)0.023 (4)*
H14B0.2864 (18)0.5111 (13)0.8938 (19)0.038 (5)*
H14C0.3297 (17)0.4255 (12)0.9861 (18)0.032 (4)*
H15A1.0023 (19)0.4647 (13)0.870 (2)0.040 (5)*
H15B0.9089 (19)0.4918 (15)0.751 (2)0.048 (5)*
H15C0.8533 (19)0.4625 (13)0.886 (2)0.041 (5)*
H16A1.1181 (16)0.2067 (11)0.5008 (17)0.027 (4)*
H16B1.2092 (17)0.2095 (11)0.6394 (18)0.030 (4)*
H16C1.1129 (18)0.1315 (14)0.6097 (19)0.037 (5)*
H1O30.544 (2)0.2340 (15)0.629 (2)0.043 (5)*
U11U22U33U12U13U23
S10.01309 (11)0.00929 (11)0.02129 (12)0.00031 (6)0.00483 (8)0.00026 (7)
O10.0134 (3)0.0105 (3)0.0246 (3)−0.0022 (2)0.0038 (2)0.0018 (2)
O20.0202 (3)0.0099 (3)0.0233 (3)0.0007 (2)0.0050 (3)−0.0041 (2)
O30.0196 (3)0.0086 (3)0.0142 (3)−0.0027 (2)0.0042 (2)−0.0027 (2)
N10.0116 (3)0.0093 (3)0.0144 (3)−0.0001 (2)0.0033 (2)−0.0007 (2)
N20.0117 (3)0.0124 (3)0.0156 (3)0.0014 (2)0.0013 (2)−0.0018 (2)
C10.0104 (3)0.0092 (3)0.0127 (3)0.0004 (2)0.0007 (2)0.0003 (3)
C20.0123 (3)0.0093 (3)0.0138 (3)0.0000 (3)0.0000 (3)−0.0005 (3)
C30.0114 (3)0.0088 (3)0.0121 (3)−0.0007 (3)0.0004 (3)0.0008 (2)
C40.0160 (4)0.0091 (3)0.0184 (4)−0.0016 (3)0.0006 (3)0.0020 (3)
C50.0181 (4)0.0135 (4)0.0189 (4)−0.0033 (3)0.0023 (3)0.0048 (3)
C60.0163 (4)0.0160 (4)0.0143 (3)−0.0022 (3)0.0032 (3)0.0034 (3)
C70.0141 (3)0.0124 (3)0.0116 (3)−0.0008 (3)0.0020 (3)0.0007 (3)
C80.0110 (3)0.0091 (3)0.0101 (3)−0.0009 (2)0.0002 (2)0.0009 (2)
C90.0111 (3)0.0074 (3)0.0111 (3)−0.0002 (2)0.0018 (2)−0.0001 (2)
C100.0119 (3)0.0139 (3)0.0118 (3)0.0028 (3)0.0030 (3)0.0027 (3)
C110.0119 (3)0.0115 (3)0.0121 (3)0.0021 (3)0.0020 (3)0.0014 (2)
C120.0117 (3)0.0128 (3)0.0129 (3)0.0020 (3)0.0003 (3)−0.0022 (3)
C130.0120 (3)0.0113 (3)0.0154 (3)0.0010 (3)0.0027 (3)0.0005 (3)
C140.0144 (4)0.0163 (4)0.0197 (4)0.0002 (3)0.0075 (3)−0.0016 (3)
C150.0156 (4)0.0162 (4)0.0237 (4)0.0015 (3)−0.0007 (3)−0.0087 (3)
C160.0150 (4)0.0126 (4)0.0234 (4)0.0022 (3)0.0060 (3)−0.0022 (3)
S1—C111.7311 (9)C6—H6A0.994 (15)
S1—C131.7323 (9)C7—C81.3988 (11)
O1—C11.2155 (10)C7—H7A0.931 (16)
O2—C21.2248 (10)C8—C91.5031 (11)
O3—C91.4059 (10)C9—C101.5681 (12)
O3—H1O30.75 (2)C10—C111.4957 (12)
N1—C11.3891 (11)C10—H10A0.974 (16)
N1—C21.3930 (11)C10—H10B0.964 (15)
N1—C141.4685 (11)C11—C121.3703 (12)
N2—C131.3089 (11)C12—C151.4933 (13)
N2—C121.3839 (11)C13—C161.4951 (12)
C1—C91.5287 (11)C14—H14A0.917 (16)
C2—C31.4834 (12)C14—H14B0.95 (2)
C3—C81.3984 (11)C14—H14C0.950 (17)
C3—C41.4012 (12)C15—H15A0.94 (2)
C4—C51.3888 (13)C15—H15B0.95 (2)
C4—H4A0.990 (18)C15—H15C0.928 (19)
C5—C61.3970 (14)C16—H16A0.957 (16)
C5—H5A0.983 (18)C16—H16B0.953 (18)
C6—C71.3919 (12)C16—H16C0.96 (2)
C11—S1—C1390.17 (4)C1—C9—C10104.67 (6)
C9—O3—H1O3108.5 (16)C11—C10—C9113.28 (7)
C1—N1—C2124.16 (7)C11—C10—H10A112.9 (9)
C1—N1—C14116.45 (7)C9—C10—H10A105.8 (9)
C2—N1—C14119.14 (7)C11—C10—H10B108.8 (9)
C13—N2—C12111.16 (7)C9—C10—H10B108.9 (9)
O1—C1—N1120.95 (8)H10A—C10—H10B107.0 (13)
O1—C1—C9120.27 (8)C12—C11—C10128.32 (8)
N1—C1—C9118.58 (7)C12—C11—S1108.83 (6)
O2—C2—N1120.06 (8)C10—C11—S1122.73 (7)
O2—C2—C3122.83 (8)C11—C12—N2115.80 (8)
N1—C2—C3117.08 (7)C11—C12—C15126.26 (8)
C8—C3—C4120.65 (8)N2—C12—C15117.92 (8)
C8—C3—C2121.30 (7)N2—C13—C16123.95 (8)
C4—C3—C2118.02 (7)N2—C13—S1114.04 (6)
C5—C4—C3119.55 (8)C16—C13—S1122.00 (7)
C5—C4—H4A120.7 (10)N1—C14—H14A108.9 (10)
C3—C4—H4A119.7 (10)N1—C14—H14B107.0 (11)
C4—C5—C6119.94 (8)H14A—C14—H14B106.1 (15)
C4—C5—H5A120.5 (10)N1—C14—H14C108.9 (10)
C6—C5—H5A119.5 (10)H14A—C14—H14C109.9 (14)
C7—C6—C5120.65 (8)H14B—C14—H14C115.9 (16)
C7—C6—H6A119.7 (9)C12—C15—H15A109.7 (12)
C5—C6—H6A119.7 (9)C12—C15—H15B110.7 (13)
C6—C7—C8119.79 (8)H15A—C15—H15B105.4 (17)
C6—C7—H7A117.7 (9)C12—C15—H15C113.7 (12)
C8—C7—H7A122.5 (9)H15A—C15—H15C111.5 (16)
C3—C8—C7119.41 (7)H15B—C15—H15C105.4 (16)
C3—C8—C9119.94 (7)C13—C16—H16A108.5 (10)
C7—C8—C9120.44 (7)C13—C16—H16B110.9 (10)
O3—C9—C8109.07 (7)H16A—C16—H16B111.1 (14)
O3—C9—C1109.61 (7)C13—C16—H16C111.4 (11)
C8—C9—C1112.75 (7)H16A—C16—H16C106.5 (14)
O3—C9—C10110.26 (7)H16B—C16—H16C108.4 (15)
C8—C9—C10110.41 (7)
C2—N1—C1—O1−170.99 (8)C7—C8—C9—C1−160.42 (7)
C14—N1—C1—O13.16 (12)C3—C8—C9—C10−91.86 (9)
C2—N1—C1—C914.15 (12)C7—C8—C9—C1082.90 (9)
C14—N1—C1—C9−171.71 (7)O1—C1—C9—O335.47 (11)
C1—N1—C2—O2−177.44 (8)N1—C1—C9—O3−149.63 (7)
C14—N1—C2—O28.56 (13)O1—C1—C9—C8157.17 (8)
C1—N1—C2—C34.55 (12)N1—C1—C9—C8−27.93 (10)
C14—N1—C2—C3−169.45 (8)O1—C1—C9—C10−82.79 (9)
O2—C2—C3—C8174.08 (8)N1—C1—C9—C1092.12 (9)
N1—C2—C3—C8−7.97 (12)O3—C9—C10—C1164.06 (9)
O2—C2—C3—C4−8.02 (13)C8—C9—C10—C11−56.54 (9)
N1—C2—C3—C4169.93 (8)C1—C9—C10—C11−178.13 (7)
C8—C3—C4—C5−0.41 (13)C9—C10—C11—C1294.19 (11)
C2—C3—C4—C5−178.32 (8)C9—C10—C11—S1−81.38 (9)
C3—C4—C5—C60.84 (14)C13—S1—C11—C120.55 (7)
C4—C5—C6—C7−0.35 (14)C13—S1—C11—C10176.87 (7)
C5—C6—C7—C8−0.59 (13)C10—C11—C12—N2−176.72 (8)
C4—C3—C8—C7−0.53 (12)S1—C11—C12—N2−0.66 (10)
C2—C3—C8—C7177.31 (7)C10—C11—C12—C151.63 (15)
C4—C3—C8—C9174.28 (8)S1—C11—C12—C15177.69 (8)
C2—C3—C8—C9−7.87 (12)C13—N2—C12—C110.41 (11)
C6—C7—C8—C31.02 (13)C13—N2—C12—C15−178.08 (8)
C6—C7—C8—C9−173.77 (8)C12—N2—C13—C16178.59 (8)
C3—C8—C9—O3146.83 (8)C12—N2—C13—S10.04 (10)
C7—C8—C9—O3−38.41 (10)C11—S1—C13—N2−0.35 (7)
C3—C8—C9—C124.83 (10)C11—S1—C13—C16−178.93 (8)
Cg1 is the centroid of C3–C8 benzene ring.
D—H···AD—HH···AD···AD—H···A
O3—H1O3···O2i0.75 (2)2.20 (2)2.8967 (10)154 (2)
C4—H4A···O1ii0.990 (18)2.350 (18)3.3045 (11)161.7 (13)
C10—H10A···O3iii0.975 (16)2.448 (14)3.2012 (11)133.8 (12)
C16—H16B···O1iv0.953 (17)2.565 (17)3.4698 (12)158.7 (13)
C15—H15B···Cg10.95 (2)2.812 (19)3.4494 (11)125.3 (15)
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of C3–C8 benzene ring.

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H1O3⋯O2i0.75 (2)2.20 (2)2.8967 (10)154 (2)
C4—H4A⋯O1ii0.990 (18)2.350 (18)3.3045 (11)161.7 (13)
C10—H10A⋯O3iii0.975 (16)2.448 (14)3.2012 (11)133.8 (12)
C16—H16B⋯O1iv0.953 (17)2.565 (17)3.4698 (12)158.7 (13)
C15—H15BCg10.95 (2)2.812 (19)3.4494 (11)125.3 (15)

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  8 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Novel spirosuccinimide aldose reductase inhibitors derived from isoquinoline-1,3-diones: 2-[(4-bromo-2-fluorophenyl)methyl]-6- fluorospiro[isoquinoline-4(1H),3'-pyrrolidine]-1,2',3,5'(2H)-tetrone and congeners. 1.

Authors:  M S Malamas; T C Hohman; J Millen
Journal:  J Med Chem       Date:  1994-06-24       Impact factor: 7.446

3.  Photoinduced [4 + 4] cycloadditions of o-quinones with oxazoles.

Authors:  Yan Zhang; Lei Wang; Min Zhang; Hoong-Kun Fun; Jian-Hua Xu
Journal:  Org Lett       Date:  2004-12-23       Impact factor: 6.005

4.  Synthesis of erythro-alpha-amino beta-hydroxy carboxylic acid esters by diastereoselective photocycloaddition of 5-methoxyoxazoles with aldehydes.

Authors:  Axel G Griesbeck; Samir Bondock; Johann Lex
Journal:  J Org Chem       Date:  2003-12-26       Impact factor: 4.354

5.  The cytotoxic activity of cyclic imido alkyl ethers, thioethers, sulfoxides, sulfones and related derivatives.

Authors:  I H Hall; J M Chapman; O T Wong
Journal:  Anticancer Drugs       Date:  1994-02       Impact factor: 2.248

6.  2'-Methyl-3,5-diphenyl-spiro-[4,6-dioxa-2-aza-bicyclo-[3.2.0]hept-2-ene-7,4'-iso-quinoline]-1',3'(2'H,4'H)-dione.

Authors:  Hoong-Kun Fun; Jia Hao Goh; Haitao Yu; Yan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-13

7.  4-[(2,4-Dimethyl-1,3-oxazol-5-yl)meth-yl]-4-hydr-oxy-2-methyl-isoquinoline-1,3(2H,4H)-dione.

Authors:  Hoong-Kun Fun; Jia Hao Goh; Haitao Yu; Yan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-03

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total
  1 in total

1.  4-[(2,5-Dimethyl-1,3-thia-zol-4-yl)meth-yl]-4-hydr-oxy-2-methyl-isoquinoline-1,3(2H,4H)-dione.

Authors:  Hoong-Kun Fun; Jia Hao Goh; Haitao Yu; Yan Zhang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-27
  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.