| Literature DB >> 21580747 |
Hoong-Kun Fun, Jia Hao Goh, Haitao Yu, Yan Zhang.
Abstract
In the title isoquinoline-dione derivative, C(16)H(16)N(2)O(3)S, the piperidine ring in the tetra-hydro-isoquinoline ring system adopts a distorted envelope conformation. The thia-zole ring is essentially planar [maximum deviation = 0.004 (1) Å] and is inclined at a dihedral angle of 31.08 (3)° with respect to the mean plane through the tetra-hydro-isoquinoline ring system. In the crystal structure, inter-molecular O-H⋯O and C-H⋯O inter-actions link adjacent mol-ecules into a three-dimensional extended network. The crystal structure is further stabilized by weak C-H⋯π inter-actions.Entities:
Year: 2010 PMID: 21580747 PMCID: PMC2984028 DOI: 10.1107/S1600536810010469
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H16N2O3S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 9887 reflections |
| θ = 2.5–35.1° | |
| µ = 0.24 mm−1 | |
| β = 92.839 (2)° | Block, colourless |
| 0.52 × 0.26 × 0.09 mm | |
| Bruker SMART APEX DUO CCD area-detector diffractometer | 5260 independent reflections |
| Radiation source: fine-focus sealed tube | 4752 reflections with |
| graphite | |
| φ and ω scans | θmax = 32.5°, θmin = 2.7° |
| Absorption correction: multi-scan ( | |
| 20742 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 5260 reflections | (Δ/σ)max = 0.001 |
| 263 parameters | Δρmax = 0.69 e Å−3 |
| 0 restraints | Δρmin = −0.47 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1)K. |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| S1 | 0.86697 (2) | 0.201051 (14) | 0.69225 (2) | 0.01443 (7) | |
| O1 | 0.38478 (7) | 0.29484 (4) | 0.78648 (8) | 0.01610 (14) | |
| O2 | 0.46407 (7) | 0.59074 (5) | 0.82383 (8) | 0.01766 (14) | |
| O3 | 0.57054 (7) | 0.27421 (4) | 0.59312 (7) | 0.01403 (13) | |
| N1 | 0.42666 (7) | 0.44221 (5) | 0.81117 (8) | 0.01168 (13) | |
| N2 | 1.03523 (7) | 0.32678 (5) | 0.71641 (8) | 0.01323 (14) | |
| C1 | 0.45580 (8) | 0.35744 (5) | 0.76386 (9) | 0.01077 (14) | |
| C2 | 0.49293 (8) | 0.51881 (6) | 0.77347 (9) | 0.01180 (14) | |
| C3 | 0.59432 (8) | 0.50884 (5) | 0.66814 (9) | 0.01079 (14) | |
| C4 | 0.64725 (9) | 0.58622 (6) | 0.61172 (10) | 0.01449 (16) | |
| C5 | 0.73988 (9) | 0.57934 (6) | 0.51012 (10) | 0.01681 (17) | |
| C6 | 0.77833 (9) | 0.49566 (6) | 0.46357 (10) | 0.01545 (16) | |
| C7 | 0.72519 (9) | 0.41869 (6) | 0.51860 (9) | 0.01266 (15) | |
| C8 | 0.63326 (8) | 0.42498 (5) | 0.62248 (8) | 0.01004 (14) | |
| C9 | 0.58517 (8) | 0.34274 (5) | 0.69351 (8) | 0.00987 (14) | |
| C10 | 0.68361 (8) | 0.31399 (6) | 0.81709 (9) | 0.01249 (15) | |
| C11 | 0.81935 (8) | 0.29894 (5) | 0.77079 (9) | 0.01180 (15) | |
| C12 | 0.92179 (8) | 0.35759 (6) | 0.77307 (9) | 0.01249 (15) | |
| C13 | 1.02070 (8) | 0.24530 (6) | 0.66982 (9) | 0.01282 (15) | |
| C14 | 0.31069 (9) | 0.45045 (6) | 0.89534 (10) | 0.01658 (17) | |
| C15 | 0.92066 (10) | 0.45085 (7) | 0.82696 (11) | 0.01856 (18) | |
| C16 | 1.12481 (9) | 0.19431 (6) | 0.59986 (11) | 0.01685 (17) | |
| H4A | 0.6166 (16) | 0.6451 (12) | 0.6429 (18) | 0.032 (4)* | |
| H5A | 0.7767 (17) | 0.6330 (12) | 0.4682 (18) | 0.032 (4)* | |
| H6A | 0.8450 (15) | 0.4910 (11) | 0.3912 (16) | 0.022 (4)* | |
| H7A | 0.7529 (14) | 0.3644 (11) | 0.4837 (16) | 0.022 (4)* | |
| H10A | 0.6458 (14) | 0.2612 (11) | 0.8585 (15) | 0.020 (3)* | |
| H10B | 0.6861 (14) | 0.3595 (10) | 0.8887 (15) | 0.018 (3)* | |
| H14A | 0.2427 (16) | 0.4203 (11) | 0.8507 (16) | 0.023 (4)* | |
| H14B | 0.2864 (18) | 0.5111 (13) | 0.8938 (19) | 0.038 (5)* | |
| H14C | 0.3297 (17) | 0.4255 (12) | 0.9861 (18) | 0.032 (4)* | |
| H15A | 1.0023 (19) | 0.4647 (13) | 0.870 (2) | 0.040 (5)* | |
| H15B | 0.9089 (19) | 0.4918 (15) | 0.751 (2) | 0.048 (5)* | |
| H15C | 0.8533 (19) | 0.4625 (13) | 0.886 (2) | 0.041 (5)* | |
| H16A | 1.1181 (16) | 0.2067 (11) | 0.5008 (17) | 0.027 (4)* | |
| H16B | 1.2092 (17) | 0.2095 (11) | 0.6394 (18) | 0.030 (4)* | |
| H16C | 1.1129 (18) | 0.1315 (14) | 0.6097 (19) | 0.037 (5)* | |
| H1O3 | 0.544 (2) | 0.2340 (15) | 0.629 (2) | 0.043 (5)* |
| S1 | 0.01309 (11) | 0.00929 (11) | 0.02129 (12) | 0.00031 (6) | 0.00483 (8) | 0.00026 (7) |
| O1 | 0.0134 (3) | 0.0105 (3) | 0.0246 (3) | −0.0022 (2) | 0.0038 (2) | 0.0018 (2) |
| O2 | 0.0202 (3) | 0.0099 (3) | 0.0233 (3) | 0.0007 (2) | 0.0050 (3) | −0.0041 (2) |
| O3 | 0.0196 (3) | 0.0086 (3) | 0.0142 (3) | −0.0027 (2) | 0.0042 (2) | −0.0027 (2) |
| N1 | 0.0116 (3) | 0.0093 (3) | 0.0144 (3) | −0.0001 (2) | 0.0033 (2) | −0.0007 (2) |
| N2 | 0.0117 (3) | 0.0124 (3) | 0.0156 (3) | 0.0014 (2) | 0.0013 (2) | −0.0018 (2) |
| C1 | 0.0104 (3) | 0.0092 (3) | 0.0127 (3) | 0.0004 (2) | 0.0007 (2) | 0.0003 (3) |
| C2 | 0.0123 (3) | 0.0093 (3) | 0.0138 (3) | 0.0000 (3) | 0.0000 (3) | −0.0005 (3) |
| C3 | 0.0114 (3) | 0.0088 (3) | 0.0121 (3) | −0.0007 (3) | 0.0004 (3) | 0.0008 (2) |
| C4 | 0.0160 (4) | 0.0091 (3) | 0.0184 (4) | −0.0016 (3) | 0.0006 (3) | 0.0020 (3) |
| C5 | 0.0181 (4) | 0.0135 (4) | 0.0189 (4) | −0.0033 (3) | 0.0023 (3) | 0.0048 (3) |
| C6 | 0.0163 (4) | 0.0160 (4) | 0.0143 (3) | −0.0022 (3) | 0.0032 (3) | 0.0034 (3) |
| C7 | 0.0141 (3) | 0.0124 (3) | 0.0116 (3) | −0.0008 (3) | 0.0020 (3) | 0.0007 (3) |
| C8 | 0.0110 (3) | 0.0091 (3) | 0.0101 (3) | −0.0009 (2) | 0.0002 (2) | 0.0009 (2) |
| C9 | 0.0111 (3) | 0.0074 (3) | 0.0111 (3) | −0.0002 (2) | 0.0018 (2) | −0.0001 (2) |
| C10 | 0.0119 (3) | 0.0139 (3) | 0.0118 (3) | 0.0028 (3) | 0.0030 (3) | 0.0027 (3) |
| C11 | 0.0119 (3) | 0.0115 (3) | 0.0121 (3) | 0.0021 (3) | 0.0020 (3) | 0.0014 (2) |
| C12 | 0.0117 (3) | 0.0128 (3) | 0.0129 (3) | 0.0020 (3) | 0.0003 (3) | −0.0022 (3) |
| C13 | 0.0120 (3) | 0.0113 (3) | 0.0154 (3) | 0.0010 (3) | 0.0027 (3) | 0.0005 (3) |
| C14 | 0.0144 (4) | 0.0163 (4) | 0.0197 (4) | 0.0002 (3) | 0.0075 (3) | −0.0016 (3) |
| C15 | 0.0156 (4) | 0.0162 (4) | 0.0237 (4) | 0.0015 (3) | −0.0007 (3) | −0.0087 (3) |
| C16 | 0.0150 (4) | 0.0126 (4) | 0.0234 (4) | 0.0022 (3) | 0.0060 (3) | −0.0022 (3) |
| S1—C11 | 1.7311 (9) | C6—H6A | 0.994 (15) |
| S1—C13 | 1.7323 (9) | C7—C8 | 1.3988 (11) |
| O1—C1 | 1.2155 (10) | C7—H7A | 0.931 (16) |
| O2—C2 | 1.2248 (10) | C8—C9 | 1.5031 (11) |
| O3—C9 | 1.4059 (10) | C9—C10 | 1.5681 (12) |
| O3—H1O3 | 0.75 (2) | C10—C11 | 1.4957 (12) |
| N1—C1 | 1.3891 (11) | C10—H10A | 0.974 (16) |
| N1—C2 | 1.3930 (11) | C10—H10B | 0.964 (15) |
| N1—C14 | 1.4685 (11) | C11—C12 | 1.3703 (12) |
| N2—C13 | 1.3089 (11) | C12—C15 | 1.4933 (13) |
| N2—C12 | 1.3839 (11) | C13—C16 | 1.4951 (12) |
| C1—C9 | 1.5287 (11) | C14—H14A | 0.917 (16) |
| C2—C3 | 1.4834 (12) | C14—H14B | 0.95 (2) |
| C3—C8 | 1.3984 (11) | C14—H14C | 0.950 (17) |
| C3—C4 | 1.4012 (12) | C15—H15A | 0.94 (2) |
| C4—C5 | 1.3888 (13) | C15—H15B | 0.95 (2) |
| C4—H4A | 0.990 (18) | C15—H15C | 0.928 (19) |
| C5—C6 | 1.3970 (14) | C16—H16A | 0.957 (16) |
| C5—H5A | 0.983 (18) | C16—H16B | 0.953 (18) |
| C6—C7 | 1.3919 (12) | C16—H16C | 0.96 (2) |
| C11—S1—C13 | 90.17 (4) | C1—C9—C10 | 104.67 (6) |
| C9—O3—H1O3 | 108.5 (16) | C11—C10—C9 | 113.28 (7) |
| C1—N1—C2 | 124.16 (7) | C11—C10—H10A | 112.9 (9) |
| C1—N1—C14 | 116.45 (7) | C9—C10—H10A | 105.8 (9) |
| C2—N1—C14 | 119.14 (7) | C11—C10—H10B | 108.8 (9) |
| C13—N2—C12 | 111.16 (7) | C9—C10—H10B | 108.9 (9) |
| O1—C1—N1 | 120.95 (8) | H10A—C10—H10B | 107.0 (13) |
| O1—C1—C9 | 120.27 (8) | C12—C11—C10 | 128.32 (8) |
| N1—C1—C9 | 118.58 (7) | C12—C11—S1 | 108.83 (6) |
| O2—C2—N1 | 120.06 (8) | C10—C11—S1 | 122.73 (7) |
| O2—C2—C3 | 122.83 (8) | C11—C12—N2 | 115.80 (8) |
| N1—C2—C3 | 117.08 (7) | C11—C12—C15 | 126.26 (8) |
| C8—C3—C4 | 120.65 (8) | N2—C12—C15 | 117.92 (8) |
| C8—C3—C2 | 121.30 (7) | N2—C13—C16 | 123.95 (8) |
| C4—C3—C2 | 118.02 (7) | N2—C13—S1 | 114.04 (6) |
| C5—C4—C3 | 119.55 (8) | C16—C13—S1 | 122.00 (7) |
| C5—C4—H4A | 120.7 (10) | N1—C14—H14A | 108.9 (10) |
| C3—C4—H4A | 119.7 (10) | N1—C14—H14B | 107.0 (11) |
| C4—C5—C6 | 119.94 (8) | H14A—C14—H14B | 106.1 (15) |
| C4—C5—H5A | 120.5 (10) | N1—C14—H14C | 108.9 (10) |
| C6—C5—H5A | 119.5 (10) | H14A—C14—H14C | 109.9 (14) |
| C7—C6—C5 | 120.65 (8) | H14B—C14—H14C | 115.9 (16) |
| C7—C6—H6A | 119.7 (9) | C12—C15—H15A | 109.7 (12) |
| C5—C6—H6A | 119.7 (9) | C12—C15—H15B | 110.7 (13) |
| C6—C7—C8 | 119.79 (8) | H15A—C15—H15B | 105.4 (17) |
| C6—C7—H7A | 117.7 (9) | C12—C15—H15C | 113.7 (12) |
| C8—C7—H7A | 122.5 (9) | H15A—C15—H15C | 111.5 (16) |
| C3—C8—C7 | 119.41 (7) | H15B—C15—H15C | 105.4 (16) |
| C3—C8—C9 | 119.94 (7) | C13—C16—H16A | 108.5 (10) |
| C7—C8—C9 | 120.44 (7) | C13—C16—H16B | 110.9 (10) |
| O3—C9—C8 | 109.07 (7) | H16A—C16—H16B | 111.1 (14) |
| O3—C9—C1 | 109.61 (7) | C13—C16—H16C | 111.4 (11) |
| C8—C9—C1 | 112.75 (7) | H16A—C16—H16C | 106.5 (14) |
| O3—C9—C10 | 110.26 (7) | H16B—C16—H16C | 108.4 (15) |
| C8—C9—C10 | 110.41 (7) | ||
| C2—N1—C1—O1 | −170.99 (8) | C7—C8—C9—C1 | −160.42 (7) |
| C14—N1—C1—O1 | 3.16 (12) | C3—C8—C9—C10 | −91.86 (9) |
| C2—N1—C1—C9 | 14.15 (12) | C7—C8—C9—C10 | 82.90 (9) |
| C14—N1—C1—C9 | −171.71 (7) | O1—C1—C9—O3 | 35.47 (11) |
| C1—N1—C2—O2 | −177.44 (8) | N1—C1—C9—O3 | −149.63 (7) |
| C14—N1—C2—O2 | 8.56 (13) | O1—C1—C9—C8 | 157.17 (8) |
| C1—N1—C2—C3 | 4.55 (12) | N1—C1—C9—C8 | −27.93 (10) |
| C14—N1—C2—C3 | −169.45 (8) | O1—C1—C9—C10 | −82.79 (9) |
| O2—C2—C3—C8 | 174.08 (8) | N1—C1—C9—C10 | 92.12 (9) |
| N1—C2—C3—C8 | −7.97 (12) | O3—C9—C10—C11 | 64.06 (9) |
| O2—C2—C3—C4 | −8.02 (13) | C8—C9—C10—C11 | −56.54 (9) |
| N1—C2—C3—C4 | 169.93 (8) | C1—C9—C10—C11 | −178.13 (7) |
| C8—C3—C4—C5 | −0.41 (13) | C9—C10—C11—C12 | 94.19 (11) |
| C2—C3—C4—C5 | −178.32 (8) | C9—C10—C11—S1 | −81.38 (9) |
| C3—C4—C5—C6 | 0.84 (14) | C13—S1—C11—C12 | 0.55 (7) |
| C4—C5—C6—C7 | −0.35 (14) | C13—S1—C11—C10 | 176.87 (7) |
| C5—C6—C7—C8 | −0.59 (13) | C10—C11—C12—N2 | −176.72 (8) |
| C4—C3—C8—C7 | −0.53 (12) | S1—C11—C12—N2 | −0.66 (10) |
| C2—C3—C8—C7 | 177.31 (7) | C10—C11—C12—C15 | 1.63 (15) |
| C4—C3—C8—C9 | 174.28 (8) | S1—C11—C12—C15 | 177.69 (8) |
| C2—C3—C8—C9 | −7.87 (12) | C13—N2—C12—C11 | 0.41 (11) |
| C6—C7—C8—C3 | 1.02 (13) | C13—N2—C12—C15 | −178.08 (8) |
| C6—C7—C8—C9 | −173.77 (8) | C12—N2—C13—C16 | 178.59 (8) |
| C3—C8—C9—O3 | 146.83 (8) | C12—N2—C13—S1 | 0.04 (10) |
| C7—C8—C9—O3 | −38.41 (10) | C11—S1—C13—N2 | −0.35 (7) |
| C3—C8—C9—C1 | 24.83 (10) | C11—S1—C13—C16 | −178.93 (8) |
| Cg1 is the centroid of C3–C8 benzene ring. |
| H··· | ||||
| O3—H1O3···O2i | 0.75 (2) | 2.20 (2) | 2.8967 (10) | 154 (2) |
| C4—H4A···O1ii | 0.990 (18) | 2.350 (18) | 3.3045 (11) | 161.7 (13) |
| C10—H10A···O3iii | 0.975 (16) | 2.448 (14) | 3.2012 (11) | 133.8 (12) |
| C16—H16B···O1iv | 0.953 (17) | 2.565 (17) | 3.4698 (12) | 158.7 (13) |
| C15—H15B···Cg1 | 0.95 (2) | 2.812 (19) | 3.4494 (11) | 125.3 (15) |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of C3–C8 benzene ring.
| H⋯ | ||||
|---|---|---|---|---|
| O3—H1 | 0.75 (2) | 2.20 (2) | 2.8967 (10) | 154 (2) |
| C4—H4 | 0.990 (18) | 2.350 (18) | 3.3045 (11) | 161.7 (13) |
| C10—H10 | 0.975 (16) | 2.448 (14) | 3.2012 (11) | 133.8 (12) |
| C16—H16 | 0.953 (17) | 2.565 (17) | 3.4698 (12) | 158.7 (13) |
| C15—H15 | 0.95 (2) | 2.812 (19) | 3.4494 (11) | 125.3 (15) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .