Literature DB >> 21580718

10-Methyl-9-phenoxy-carbonyl-acridinium trifluoro-methane-sulfonate monohydrate.

Damian Trzybiński1, Karol Krzymiński, Artur Sikorski, Jerzy Błażejowski.   

Abstract

In the crystal structure of the title compound, C(21)H(16)NO(2) (+)·CF(3)SO(3) (-)·H(2)O, the anions and the water mol-ecules are linked by O-H⋯O inter-actions, while the cations form inversion dimers through π-π inter-actions between acridine ring systems. These dimers are linked by C-H⋯O and C-F⋯π inter-actions to adjacent anions, and by C-H⋯π inter-actions to neighboring cations. The water mol-ecule links two H atoms of the cation by C-H⋯O inter-actions and two adjacent anions by O-H⋯O inter-actions. The acridine and benzene ring systems are oriented at 15.6 (1)°. The carboxyl group is twisted at an angle of 77.0 (1)° relative to the acridine skeleton. The mean planes of the adjacent acridine units are either parallel or inclined at an angle of 18.4 (1)°.

Entities:  

Year:  2010        PMID: 21580718      PMCID: PMC2984046          DOI: 10.1107/S1600536810009979

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the chemiluminogenic properties of 9-phenoxy­carbonyl-10-methyl­acridinium trifluoro­meth­ane­sulf­on­ates, see: Brown et al. (2009 ▶); Rak et al. (1999 ▶); Roda et al. (2003 ▶); Zomer & Jacquemijns (2001 ▶). For related structures, see: Sikorski et al. (2007 ▶); Trzybiński et al. (2009 ▶). For inter­molecular inter­actions, see: Bianchi et al. (2004 ▶); Dorn et al. (2005 ▶); Hunter et al. (2001 ▶); Novoa et al. (2006 ▶); Takahashi et al. (2001 ▶). For the synthesis, see: Sato (1996 ▶); Trzybiński et al. (2009 ▶).

Experimental

Crystal data

C21H16NO2 +·CF3SO3 −·H2O M = 481.44 Monoclinic, a = 11.3807 (4) Å b = 9.5785 (2) Å c = 19.7134 (6) Å β = 98.172 (3)° V = 2127.14 (11) Å3 Z = 4 Mo Kα radiation μ = 0.22 mm−1 T = 295 K 0.78 × 0.16 × 0.10 mm

Data collection

Oxford Diffraction Gemini R Ultra Ruby CCD diffractometer Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008 ▶). T min = 0.741, T max = 1.000 46462 measured reflections 3792 independent reflections 2422 reflections with I > 2σ(I) R int = 0.060

Refinement

R[F 2 > 2σ(F 2)] = 0.064 wR(F 2) = 0.211 S = 1.03 3792 reflections 305 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.59 e Å−3 Δρmin = −0.39 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2008 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2008 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810009979/ng2742sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810009979/ng2742Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H16NO2+·CF3SO3·H2OF(000) = 992
Mr = 481.44Dx = 1.503 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 15973 reflections
a = 11.3807 (4) Åθ = 3.0–29.3°
b = 9.5785 (2) ŵ = 0.22 mm1
c = 19.7134 (6) ÅT = 295 K
β = 98.172 (3)°Needle, yellow
V = 2127.14 (11) Å30.78 × 0.16 × 0.10 mm
Z = 4
Oxford Diffraction Gemini R Ultra Ruby CCD diffractometer3792 independent reflections
Radiation source: Enhanced (Mo) X-ray Source2422 reflections with I > 2σ(I)
graphiteRint = 0.060
Detector resolution: 10.4002 pixels mm-1θmax = 25.1°, θmin = 3.0°
ω scansh = −13→13
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2008).k = −11→11
Tmin = 0.741, Tmax = 1.000l = −23→23
46462 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.064Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.211H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.146P)2] where P = (Fo2 + 2Fc2)/3
3792 reflections(Δ/σ)max < 0.001
305 parametersΔρmax = 0.59 e Å3
3 restraintsΔρmin = −0.39 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
C10.6362 (3)0.0857 (3)0.60005 (15)0.0534 (7)
H10.63280.18160.60670.064*
C20.7417 (3)0.0248 (3)0.59672 (17)0.0647 (8)
H20.81030.07880.59990.078*
C30.7481 (3)−0.1205 (4)0.58836 (19)0.0703 (9)
H30.8218−0.16200.58770.084*
C40.6494 (3)−0.2020 (3)0.58122 (16)0.0613 (8)
H40.6561−0.29790.57530.074*
C50.2201 (3)−0.2410 (3)0.56540 (18)0.0700 (10)
H50.2234−0.33630.55670.084*
C60.1149 (4)−0.1788 (4)0.5680 (2)0.0859 (12)
H60.0464−0.23320.56150.103*
C70.1041 (3)−0.0366 (4)0.5799 (2)0.0822 (11)
H70.02960.00290.58050.099*
C80.2025 (3)0.0440 (3)0.59056 (17)0.0637 (9)
H80.19540.13890.59910.076*
C90.4195 (3)0.0648 (2)0.59775 (13)0.0450 (7)
N100.4351 (2)−0.2193 (2)0.57446 (11)0.0476 (6)
C110.5304 (3)0.0064 (3)0.59353 (12)0.0439 (7)
C120.5374 (3)−0.1418 (3)0.58269 (13)0.0468 (7)
C130.3168 (3)−0.0151 (3)0.58886 (14)0.0493 (7)
C140.3255 (3)−0.1614 (3)0.57599 (14)0.0506 (7)
C150.4143 (2)0.2199 (3)0.61254 (14)0.0454 (7)
O160.4005 (2)0.24024 (17)0.67778 (10)0.0597 (6)
O170.4242 (2)0.30844 (19)0.57195 (10)0.0647 (6)
C180.4040 (3)0.3808 (3)0.70187 (14)0.0523 (8)
C190.3003 (3)0.4502 (3)0.70065 (17)0.0635 (9)
H190.22860.40800.68360.076*
C200.3034 (4)0.5869 (4)0.7257 (2)0.0763 (11)
H200.23350.63750.72520.092*
C210.4108 (4)0.6459 (4)0.7509 (2)0.0797 (11)
H210.41340.73660.76790.096*
C220.5133 (4)0.5729 (4)0.7514 (2)0.0815 (11)
H220.58550.61420.76830.098*
C230.5108 (3)0.4375 (3)0.72675 (17)0.0669 (9)
H230.58050.38660.72720.080*
C240.4419 (3)−0.3729 (3)0.56256 (17)0.0637 (9)
H24A0.3966−0.42130.59280.095*
H24B0.5232−0.40260.57140.095*
H24C0.4102−0.39370.51590.095*
O250.1330 (4)0.3806 (6)0.5581 (2)0.1480 (15)
H25A0.136 (7)0.397 (9)0.5162 (16)0.222*
H25B0.064 (4)0.350 (10)0.563 (4)0.222*
S260.15677 (9)0.55386 (9)0.38344 (5)0.0715 (4)
O270.1121 (4)0.4342 (3)0.41645 (19)0.1242 (12)
O280.0899 (3)0.6777 (3)0.38719 (15)0.0997 (9)
O290.2829 (3)0.5641 (3)0.39743 (18)0.1067 (10)
C300.1269 (4)0.5037 (5)0.2942 (2)0.0903 (12)
F310.1687 (3)0.6041 (3)0.25626 (16)0.1375 (12)
F320.0152 (3)0.4950 (4)0.27144 (17)0.1380 (12)
F330.1787 (3)0.3873 (3)0.28194 (15)0.1227 (10)
U11U22U33U12U13U23
C10.065 (2)0.0385 (14)0.0567 (17)−0.0056 (13)0.0088 (14)−0.0035 (12)
C20.061 (2)0.0628 (19)0.071 (2)−0.0063 (16)0.0092 (16)−0.0077 (15)
C30.067 (2)0.068 (2)0.076 (2)0.0102 (18)0.0113 (17)−0.0048 (17)
C40.078 (2)0.0434 (16)0.063 (2)0.0136 (15)0.0108 (16)−0.0023 (13)
C50.082 (3)0.0491 (17)0.078 (2)−0.0199 (17)0.0084 (18)−0.0067 (15)
C60.063 (3)0.082 (3)0.111 (3)−0.027 (2)0.008 (2)−0.018 (2)
C70.056 (2)0.086 (3)0.104 (3)−0.0065 (19)0.011 (2)−0.019 (2)
C80.064 (2)0.0529 (17)0.074 (2)−0.0019 (15)0.0097 (17)−0.0084 (14)
C90.0643 (19)0.0295 (13)0.0413 (14)−0.0039 (12)0.0074 (13)−0.0014 (10)
N100.0708 (17)0.0262 (10)0.0461 (13)−0.0039 (10)0.0091 (11)−0.0018 (8)
C110.0603 (18)0.0320 (13)0.0392 (14)−0.0017 (12)0.0065 (12)−0.0017 (10)
C120.0670 (19)0.0334 (13)0.0398 (14)0.0012 (13)0.0072 (13)0.0018 (10)
C130.0632 (19)0.0371 (14)0.0469 (15)−0.0020 (13)0.0058 (13)−0.0028 (11)
C140.066 (2)0.0377 (14)0.0481 (16)−0.0117 (13)0.0071 (13)−0.0022 (11)
C150.0543 (18)0.0311 (13)0.0505 (17)−0.0011 (11)0.0071 (13)−0.0024 (12)
O160.0985 (17)0.0294 (9)0.0546 (13)−0.0024 (9)0.0226 (11)−0.0024 (8)
O170.1108 (19)0.0318 (10)0.0544 (12)−0.0024 (10)0.0214 (12)0.0035 (9)
C180.082 (2)0.0329 (14)0.0457 (15)−0.0025 (14)0.0201 (15)−0.0031 (11)
C190.072 (2)0.0525 (18)0.069 (2)−0.0098 (16)0.0234 (17)−0.0085 (14)
C200.090 (3)0.0555 (19)0.091 (3)0.0138 (18)0.039 (2)−0.0100 (17)
C210.111 (3)0.0485 (18)0.083 (3)−0.011 (2)0.026 (2)−0.0207 (17)
C220.099 (3)0.064 (2)0.080 (3)−0.017 (2)0.010 (2)−0.0235 (18)
C230.077 (2)0.0539 (18)0.069 (2)0.0022 (16)0.0076 (17)−0.0084 (15)
C240.096 (2)0.0253 (13)0.072 (2)−0.0041 (14)0.0191 (17)−0.0056 (12)
O250.121 (3)0.191 (4)0.130 (3)0.034 (3)0.009 (2)0.014 (3)
S260.0867 (8)0.0584 (5)0.0688 (6)−0.0088 (4)0.0084 (5)−0.0088 (4)
O270.174 (3)0.092 (2)0.118 (3)−0.020 (2)0.058 (2)0.0251 (17)
O280.133 (3)0.0679 (16)0.098 (2)0.0144 (16)0.0154 (17)−0.0183 (14)
O290.090 (2)0.100 (2)0.119 (2)−0.0072 (16)−0.0236 (17)−0.0098 (17)
C300.094 (3)0.081 (3)0.092 (3)0.014 (2)0.001 (2)−0.019 (2)
F310.192 (3)0.131 (2)0.0935 (19)0.021 (2)0.034 (2)0.0265 (16)
F320.105 (2)0.155 (3)0.138 (2)0.0063 (18)−0.0372 (18)−0.058 (2)
F330.161 (3)0.0951 (18)0.110 (2)0.0314 (17)0.0119 (17)−0.0364 (14)
C1—C21.345 (4)C15—O171.182 (3)
C1—C111.414 (4)C15—O161.332 (3)
C1—H10.9300O16—C181.426 (3)
C2—C31.405 (5)C18—C191.352 (5)
C2—H20.9300C18—C231.357 (5)
C3—C41.358 (5)C19—C201.398 (5)
C3—H30.9300C19—H190.9300
C4—C121.404 (4)C20—C211.374 (6)
C4—H40.9300C20—H200.9300
C5—C61.345 (5)C21—C221.358 (6)
C5—C141.412 (4)C21—H210.9300
C5—H50.9300C22—C231.384 (5)
C6—C71.391 (5)C22—H220.9300
C6—H60.9300C23—H230.9300
C7—C81.351 (5)C24—H24A0.9600
C7—H70.9300C24—H24B0.9600
C8—C131.424 (4)C24—H24C0.9600
C8—H80.9300O25—H25A0.85 (2)
C9—C131.387 (4)O25—H25B0.85 (2)
C9—C111.393 (4)S26—O281.417 (3)
C9—C151.517 (3)S26—O291.426 (3)
N10—C141.369 (4)S26—O271.445 (3)
N10—C121.371 (4)S26—C301.809 (5)
N10—C241.494 (3)C30—F321.290 (5)
C11—C121.439 (4)C30—F331.299 (5)
C13—C141.430 (4)C30—F311.346 (5)
C2—C1—C11121.2 (3)O17—C15—O16125.8 (2)
C2—C1—H1119.4O17—C15—C9124.2 (2)
C11—C1—H1119.4O16—C15—C9110.0 (2)
C1—C2—C3119.8 (3)C15—O16—C18117.2 (2)
C1—C2—H2120.1C19—C18—C23123.0 (3)
C3—C2—H2120.1C19—C18—O16118.4 (3)
C4—C3—C2121.8 (3)C23—C18—O16118.6 (3)
C4—C3—H3119.1C18—C19—C20118.4 (3)
C2—C3—H3119.1C18—C19—H19120.8
C3—C4—C12120.1 (3)C20—C19—H19120.8
C3—C4—H4120.0C21—C20—C19119.3 (3)
C12—C4—H4120.0C21—C20—H20120.3
C6—C5—C14119.8 (3)C19—C20—H20120.3
C6—C5—H5120.1C22—C21—C20120.6 (3)
C14—C5—H5120.1C22—C21—H21119.7
C5—C6—C7122.7 (3)C20—C21—H21119.7
C5—C6—H6118.6C21—C22—C23120.3 (4)
C7—C6—H6118.6C21—C22—H22119.8
C8—C7—C6119.7 (4)C23—C22—H22119.8
C8—C7—H7120.2C18—C23—C22118.3 (4)
C6—C7—H7120.2C18—C23—H23120.8
C7—C8—C13120.6 (3)C22—C23—H23120.8
C7—C8—H8119.7N10—C24—H24A109.5
C13—C8—H8119.7N10—C24—H24B109.5
C13—C9—C11121.7 (2)H24A—C24—H24B109.5
C13—C9—C15120.6 (3)N10—C24—H24C109.5
C11—C9—C15117.7 (2)H24A—C24—H24C109.5
C14—N10—C12122.6 (2)H24B—C24—H24C109.5
C14—N10—C24118.1 (2)H25A—O25—H25B110 (3)
C12—N10—C24119.3 (2)O28—S26—O29117.75 (19)
C9—C11—C1123.1 (2)O28—S26—O27114.5 (2)
C9—C11—C12118.3 (2)O29—S26—O27112.1 (2)
C1—C11—C12118.6 (3)O28—S26—C30104.19 (19)
N10—C12—C4122.2 (2)O29—S26—C30104.5 (2)
N10—C12—C11119.2 (3)O27—S26—C30101.4 (2)
C4—C12—C11118.6 (3)F32—C30—F33109.3 (4)
C9—C13—C8122.3 (2)F32—C30—F31105.2 (4)
C9—C13—C14119.0 (3)F33—C30—F31107.7 (4)
C8—C13—C14118.7 (3)F32—C30—S26113.3 (3)
N10—C14—C5122.4 (3)F33—C30—S26112.4 (3)
N10—C14—C13119.2 (2)F31—C30—S26108.6 (3)
C5—C14—C13118.5 (3)
C11—C1—C2—C3−1.6 (5)C6—C5—C14—N10179.5 (3)
C1—C2—C3—C42.2 (5)C6—C5—C14—C13−0.4 (5)
C2—C3—C4—C12−0.6 (5)C9—C13—C14—N101.6 (4)
C14—C5—C6—C70.9 (6)C8—C13—C14—N10−179.8 (3)
C5—C6—C7—C8−1.1 (7)C9—C13—C14—C5−178.5 (3)
C6—C7—C8—C130.8 (6)C8—C13—C14—C50.1 (4)
C13—C9—C11—C1177.8 (3)C13—C9—C15—O17−104.9 (4)
C15—C9—C11—C1−2.2 (4)C11—C9—C15—O1775.1 (4)
C13—C9—C11—C12−2.8 (4)C13—C9—C15—O1676.8 (3)
C15—C9—C11—C12177.2 (2)C11—C9—C15—O16−103.2 (3)
C2—C1—C11—C9178.9 (3)O17—C15—O16—C18−3.4 (4)
C2—C1—C11—C12−0.4 (4)C9—C15—O16—C18174.8 (2)
C14—N10—C12—C4179.8 (3)C15—O16—C18—C1994.4 (3)
C24—N10—C12—C4−0.8 (4)C15—O16—C18—C23−87.5 (3)
C14—N10—C12—C110.1 (4)C23—C18—C19—C200.5 (5)
C24—N10—C12—C11179.5 (2)O16—C18—C19—C20178.6 (3)
C3—C4—C12—N10178.8 (3)C18—C19—C20—C21−0.4 (5)
C3—C4—C12—C11−1.5 (4)C19—C20—C21—C220.4 (6)
C9—C11—C12—N102.3 (3)C20—C21—C22—C23−0.4 (6)
C1—C11—C12—N10−178.3 (2)C19—C18—C23—C22−0.6 (5)
C9—C11—C12—C4−177.4 (2)O16—C18—C23—C22−178.7 (3)
C1—C11—C12—C42.0 (4)C21—C22—C23—C180.5 (6)
C11—C9—C13—C8−177.7 (3)O28—S26—C30—F32−53.1 (4)
C15—C9—C13—C82.3 (4)O29—S26—C30—F32−177.2 (3)
C11—C9—C13—C140.9 (4)O27—S26—C30—F3266.1 (4)
C15—C9—C13—C14−179.1 (2)O28—S26—C30—F33−177.6 (3)
C7—C8—C13—C9178.3 (3)O29—S26—C30—F3358.2 (4)
C7—C8—C13—C14−0.3 (5)O27—S26—C30—F33−58.5 (4)
C12—N10—C14—C5178.0 (3)O28—S26—C30—F3163.3 (4)
C24—N10—C14—C5−1.3 (4)O29—S26—C30—F31−60.8 (3)
C12—N10—C14—C13−2.1 (4)O27—S26—C30—F31−177.5 (3)
C24—N10—C14—C13178.6 (2)
Cg4 is the centroid of the C18–C23 ring.
D—H···AD—HH···AD···AD—H···A
C2—H2···O28i0.932.593.424 (4)149
C8—H8···O250.932.523.360 (6)150
C19—H19···O250.932.573.232 (5)129
C24—H24A···Cg4ii0.962.693.484 (4)140
C24—H24C···O29ii0.962.603.544 (5)168
O25—H25A···O270.85 (4)1.98 (3)2.816 (5)170 (8)
O25—H25B···O28iii0.86 (4)2.14 (6)2.948 (6)156 (7)
XI···JI···JX···JXI···J
C30—F31···Cg2iv3.269 (3)4.075 (4)117.8 (2)
C30—F32···Cg1iv3.744 (3)4.463 (4)116.1 (3)
IJCgI···CgJDihedral angleCgI_PerpCgI_Offset
12v3.682 (2)1.92 (1)3.568 (1)0.909 (1)
21v3.682 (2)1.92 (1)3.591 (1)0.814 (1)
Table 1

Hydrogen-bond geometry (Å, °)

Cg4 is the centroid of the C18–C23 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯O28i0.932.593.424 (4)149
C8—H8⋯O250.932.523.360 (6)150
C19—H19⋯O250.932.573.232 (5)129
C24—H24ACg4ii0.962.693.484 (4)140
C24—H24C⋯O29ii0.962.603.544 (5)168
O25—H25A⋯O270.85 (4)1.98 (3)2.816 (5)170 (8)
O25—H25B⋯O28iii0.86 (4)2.14 (6)2.948 (6)156 (7)

Symmetry codes: (i) ; (ii) ; (iii) .

Table 2

C—F⋯π inter­actions (Å, °)

Cg1 and Cg2 are the centroids of the C9/N10/C11–C14 and C1–C4/C11/C12 rings, respectively.

XIJIJXJXIJ
C30—F31⋯Cg2iv3.269 (3)4.075 (4)117.8 (2)
C30—F32⋯Cg1iv3.744 (3)4.463 (4)116.1 (3)

Symmetry code: (iv) .

Table 3

π–π inter­actions (Å, °)

Cg1 and Cg2 are the centroids of the C9/N10/C11–C14 and C1–C4/C11/C12 rings, respectively. CgI⋯CgJ is the distance between ring centroids. The dihedral angle is that between the planes of the rings I and J. CgI_Perp is the perpendicular distance of CgI from ring J. CgI_Offset is the distance between CgI and the perpendicular projection of CgJ on ring I.

IJCgICgJDihedral angleCgI_PerpCgI_Offset
12v3.682 (2)1.92 (1)3.568 (1)0.909 (1)
21v3.682 (2)1.92 (1)3.591 (1)0.814 (1)

Symmetry code: (v) −x + 1, −y, −z + 1.

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