| Literature DB >> 21580641 |
Zbigniew Karczmarzyk, Teodozja M Lipińska, Waldemar Wysocki, Zofia Urbańczyk-Lipkowska, Przemysław Kalicki.
Abstract
In the title compound, C(9)H(11)NO·0.5H(2)O, the asymmetric unit contains two similar mol-ecules of 5,6,7,8-tetra-hydro-quinoline 1-oxide and one water mol-ecule. The water mol-ecule links the two O atoms of both independent N-oxides into dimers via O-H⋯O hydrogen bonds, forming a three-dimensional network along [101], which is additionally stabilized by weak C-H⋯O inter-molecular inter-actions. In each mol-ecule, the saturated six-membered rings exist in a conformation inter-mediate between a half-chair and sofa.Entities:
Year: 2010 PMID: 21580641 PMCID: PMC2984073 DOI: 10.1107/S1600536810008779
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H11NO·0.5H2O | |
| Orthorhombic, | Cu |
| Hall symbol: -P 2ac 2ab | Cell parameters from 3676 reflections |
| θ = 5.7–66.9° | |
| µ = 0.70 mm−1 | |
| Block, colourless | |
| 0.28 × 0.26 × 0.21 mm |
| Bruker SMART APEXII CCD diffractometer | 2727 independent reflections |
| Radiation source: fine-focus sealed tube | 1989 reflections with |
| graphite | |
| φ and ω scans | θmax = 65.4°, θmin = 5.2° |
| Absorption correction: multi-scan ( | |
| 11258 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2727 reflections | Δρmax = 0.44 e Å−3 |
| 215 parameters | Δρmin = −0.24 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0014 (4) |
| Experimental. 1H MNR (400 MHz, CDCl3) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1A | 0.11925 (15) | 0.33158 (10) | 0.13008 (9) | 0.0703 (6) | |
| N1A | 0.13994 (15) | 0.41708 (12) | 0.11018 (11) | 0.0502 (6) | |
| C2A | 0.16947 (18) | 0.47498 (16) | 0.17206 (15) | 0.0581 (7) | |
| H2A | 0.1737 | 0.4547 | 0.2290 | 0.087* | |
| C3A | 0.1930 (2) | 0.56261 (17) | 0.15166 (17) | 0.0666 (8) | |
| H3A | 0.2143 | 0.6025 | 0.1942 | 0.100* | |
| C4A | 0.1853 (2) | 0.59244 (16) | 0.06758 (18) | 0.0669 (8) | |
| H4A | 0.2018 | 0.6527 | 0.0536 | 0.100* | |
| C5A | 0.1449 (2) | 0.56465 (16) | −0.08980 (17) | 0.0686 (8) | |
| H51A | 0.0900 | 0.6010 | −0.0964 | 0.103* | |
| H52A | 0.1961 | 0.6041 | −0.1041 | 0.103* | |
| C6A | 0.1422 (2) | 0.4849 (2) | −0.15194 (16) | 0.0774 (9) | |
| H61A | 0.1268 | 0.5075 | −0.2091 | 0.116* | |
| H62A | 0.2018 | 0.4566 | −0.1551 | 0.116* | |
| C7A | 0.0749 (2) | 0.41457 (18) | −0.12508 (14) | 0.0673 (8) | |
| H71A | 0.0741 | 0.3649 | −0.1672 | 0.101* | |
| H72A | 0.0149 | 0.4424 | −0.1242 | 0.101* | |
| C8A | 0.09560 (19) | 0.37485 (14) | −0.03650 (13) | 0.0534 (7) | |
| H81A | 0.0408 | 0.3472 | −0.0132 | 0.080* | |
| H82A | 0.1405 | 0.3262 | −0.0426 | 0.080* | |
| C9A | 0.13012 (16) | 0.44502 (14) | 0.02589 (12) | 0.0455 (6) | |
| C10A | 0.15331 (17) | 0.53397 (15) | 0.00343 (15) | 0.0520 (6) | |
| O1B | 0.13846 (14) | 0.36329 (13) | 0.38241 (10) | 0.0701 (6) | |
| N1B | 0.05059 (15) | 0.35441 (11) | 0.39183 (10) | 0.0489 (6) | |
| C2B | −0.0012 (2) | 0.33685 (15) | 0.32153 (14) | 0.0571 (7) | |
| H2B | 0.0258 | 0.3314 | 0.2674 | 0.086* | |
| C3B | −0.0921 (2) | 0.32725 (16) | 0.32982 (17) | 0.0647 (8) | |
| H3B | −0.1277 | 0.3148 | 0.2815 | 0.097* | |
| C4B | −0.1320 (2) | 0.33585 (16) | 0.40978 (19) | 0.0658 (7) | |
| H4B | −0.1946 | 0.3297 | 0.4153 | 0.099* | |
| C5B | −0.1198 (3) | 0.3615 (2) | 0.57197 (19) | 0.0843 (11) | |
| H51B | −0.1695 | 0.3179 | 0.5776 | 0.126* | |
| H52B | −0.1441 | 0.4232 | 0.5800 | 0.126* | |
| C6B | −0.0486 (3) | 0.3418 (2) | 0.64194 (17) | 0.0941 (12) | |
| H61B | −0.0747 | 0.3538 | 0.6984 | 0.141* | |
| H62B | −0.0315 | 0.2771 | 0.6397 | 0.141* | |
| C7B | 0.0323 (3) | 0.3992 (2) | 0.63022 (15) | 0.0853 (11) | |
| H71B | 0.0747 | 0.3870 | 0.6768 | 0.128* | |
| H72B | 0.0151 | 0.4638 | 0.6331 | 0.128* | |
| C8B | 0.0784 (2) | 0.38036 (16) | 0.54433 (14) | 0.0591 (7) | |
| H81B | 0.1162 | 0.4329 | 0.5295 | 0.089* | |
| H82B | 0.1177 | 0.3270 | 0.5505 | 0.089* | |
| C9B | 0.01368 (19) | 0.36319 (13) | 0.47254 (13) | 0.0475 (6) | |
| C10B | −0.0792 (2) | 0.35369 (15) | 0.48235 (15) | 0.0569 (7) | |
| O2 | 0.21964 (17) | 0.24427 (13) | 0.26255 (13) | 0.0781 (7) | |
| H21 | 0.188 (2) | 0.269 (2) | 0.213 (2) | 0.117* | |
| H22 | 0.195 (2) | 0.280 (2) | 0.308 (2) | 0.117* |
| O1A | 0.1126 (19) | 0.0511 (9) | 0.0473 (9) | −0.0176 (9) | −0.0026 (9) | 0.0080 (7) |
| N1A | 0.0606 (16) | 0.0485 (10) | 0.0415 (9) | −0.0037 (8) | 0.0024 (8) | −0.0043 (8) |
| C2A | 0.0615 (18) | 0.0618 (14) | 0.0510 (11) | −0.0026 (12) | −0.0041 (11) | −0.0143 (11) |
| C3A | 0.067 (2) | 0.0616 (14) | 0.0708 (15) | −0.0049 (12) | −0.0088 (14) | −0.0202 (12) |
| C4A | 0.070 (2) | 0.0476 (12) | 0.0833 (17) | −0.0082 (12) | 0.0021 (15) | −0.0046 (12) |
| C5A | 0.079 (2) | 0.0593 (14) | 0.0676 (14) | −0.0017 (13) | 0.0070 (14) | 0.0177 (12) |
| C6A | 0.099 (3) | 0.0823 (18) | 0.0509 (12) | 0.0069 (16) | 0.0040 (14) | 0.0130 (13) |
| C7A | 0.086 (3) | 0.0698 (16) | 0.0463 (12) | 0.0007 (14) | −0.0053 (12) | −0.0003 (11) |
| C8A | 0.069 (2) | 0.0491 (12) | 0.0426 (11) | −0.0037 (10) | 0.0005 (11) | −0.0051 (9) |
| C9A | 0.0486 (16) | 0.0471 (11) | 0.0408 (10) | 0.0002 (9) | 0.0054 (10) | −0.0019 (9) |
| C10A | 0.0497 (17) | 0.0473 (12) | 0.0590 (12) | −0.0006 (9) | 0.0060 (11) | 0.0004 (11) |
| O1B | 0.0602 (16) | 0.0916 (13) | 0.0584 (10) | −0.0088 (10) | 0.0101 (9) | −0.0125 (9) |
| N1B | 0.0553 (16) | 0.0495 (10) | 0.0418 (9) | −0.0027 (8) | 0.0034 (9) | −0.0025 (8) |
| C2B | 0.071 (2) | 0.0567 (13) | 0.0439 (11) | −0.0008 (12) | −0.0046 (12) | −0.0036 (10) |
| C3B | 0.074 (2) | 0.0562 (14) | 0.0638 (15) | −0.0020 (12) | −0.0162 (14) | 0.0025 (11) |
| C4B | 0.0531 (19) | 0.0587 (14) | 0.0855 (18) | 0.0083 (12) | 0.0009 (15) | 0.0121 (13) |
| C5B | 0.089 (3) | 0.0870 (19) | 0.0769 (18) | 0.0294 (17) | 0.0379 (18) | 0.0192 (15) |
| C6B | 0.142 (4) | 0.086 (2) | 0.0537 (15) | 0.026 (2) | 0.0270 (18) | 0.0116 (14) |
| C7B | 0.136 (4) | 0.0739 (17) | 0.0454 (13) | 0.0120 (19) | 0.0020 (16) | −0.0034 (13) |
| C8B | 0.081 (2) | 0.0520 (12) | 0.0446 (11) | 0.0045 (11) | −0.0058 (12) | −0.0046 (10) |
| C9B | 0.0632 (19) | 0.0377 (10) | 0.0416 (11) | 0.0064 (9) | 0.0042 (10) | 0.0016 (8) |
| C10B | 0.065 (2) | 0.0469 (12) | 0.0583 (13) | 0.0125 (11) | 0.0090 (12) | 0.0092 (10) |
| O2 | 0.0836 (19) | 0.0752 (12) | 0.0755 (11) | 0.0184 (10) | 0.0147 (11) | 0.0021 (9) |
| O1A—N1A | 1.310 (2) | N1B—C2B | 1.353 (3) |
| N1A—C2A | 1.344 (3) | N1B—C9B | 1.368 (3) |
| N1A—C9A | 1.373 (3) | C2B—C3B | 1.352 (4) |
| C2A—C3A | 1.351 (3) | C2B—H2B | 0.9300 |
| C2A—H2A | 0.9300 | C3B—C4B | 1.375 (4) |
| C3A—C4A | 1.375 (4) | C3B—H3B | 0.9300 |
| C3A—H3A | 0.9300 | C4B—C10B | 1.390 (4) |
| C4A—C10A | 1.387 (4) | C4B—H4B | 0.9300 |
| C4A—H4A | 0.9300 | C5B—C10B | 1.514 (4) |
| C5A—C6A | 1.503 (4) | C5B—C6B | 1.534 (5) |
| C5A—C10A | 1.514 (3) | C5B—H51B | 0.9700 |
| C5A—H51A | 0.9700 | C5B—H52B | 0.9700 |
| C5A—H52A | 0.9700 | C6B—C7B | 1.462 (5) |
| C6A—C7A | 1.480 (4) | C6B—H61B | 0.9700 |
| C6A—H61A | 0.9700 | C6B—H62B | 0.9700 |
| C6A—H62A | 0.9700 | C7B—C8B | 1.517 (4) |
| C7A—C8A | 1.517 (3) | C7B—H71B | 0.9700 |
| C7A—H71A | 0.9700 | C7B—H72B | 0.9700 |
| C7A—H72A | 0.9700 | C8B—C9B | 1.484 (3) |
| C8A—C9A | 1.490 (3) | C8B—H81B | 0.9700 |
| C8A—H81A | 0.9700 | C8B—H82B | 0.9700 |
| C8A—H82A | 0.9700 | C9B—C10B | 1.383 (4) |
| C9A—C10A | 1.376 (3) | O2—H21 | 0.96 (3) |
| O1B—N1B | 1.308 (3) | O2—H22 | 0.95 (4) |
| O1A—N1A—C2A | 119.72 (18) | O1B—N1B—C9B | 119.0 (2) |
| O1A—N1A—C9A | 118.46 (17) | C2B—N1B—C9B | 121.9 (2) |
| C2A—N1A—C9A | 121.83 (19) | N1B—C2B—C3B | 120.1 (2) |
| N1A—C2A—C3A | 120.0 (2) | N1B—C2B—H2B | 120.0 |
| N1A—C2A—H2A | 120.0 | C3B—C2B—H2B | 120.0 |
| C3A—C2A—H2A | 120.0 | C2B—C3B—C4B | 119.9 (3) |
| C2A—C3A—C4A | 119.6 (2) | C2B—C3B—H3B | 120.0 |
| C2A—C3A—H3A | 120.2 | C4B—C3B—H3B | 120.0 |
| C4A—C3A—H3A | 120.2 | C3B—C4B—C10B | 120.3 (3) |
| C3A—C4A—C10A | 120.9 (2) | C3B—C4B—H4B | 119.8 |
| C3A—C4A—H4A | 119.5 | C10B—C4B—H4B | 119.8 |
| C10A—C4A—H4A | 119.5 | C10B—C5B—C6B | 111.2 (3) |
| C6A—C5A—C10A | 112.75 (19) | C10B—C5B—H51B | 109.4 |
| C6A—C5A—H51A | 109.0 | C6B—C5B—H51B | 109.4 |
| C10A—C5A—H51A | 109.0 | C10B—C5B—H52B | 109.4 |
| C6A—C5A—H52A | 109.0 | C6B—C5B—H52B | 109.4 |
| C10A—C5A—H52A | 109.0 | H51B—C5B—H52B | 108.0 |
| H51A—C5A—H52A | 107.8 | C7B—C6B—C5B | 111.3 (3) |
| C7A—C6A—C5A | 111.5 (2) | C7B—C6B—H61B | 109.4 |
| C7A—C6A—H61A | 109.3 | C5B—C6B—H61B | 109.4 |
| C5A—C6A—H61A | 109.3 | C7B—C6B—H62B | 109.4 |
| C7A—C6A—H62A | 109.3 | C5B—C6B—H62B | 109.4 |
| C5A—C6A—H62A | 109.3 | H61B—C6B—H62B | 108.0 |
| H61A—C6A—H62A | 108.0 | C6B—C7B—C8B | 111.8 (2) |
| C6A—C7A—C8A | 112.3 (2) | C6B—C7B—H71B | 109.3 |
| C6A—C7A—H71A | 109.1 | C8B—C7B—H71B | 109.3 |
| C8A—C7A—H71A | 109.1 | C6B—C7B—H72B | 109.3 |
| C6A—C7A—H72A | 109.1 | C8B—C7B—H72B | 109.3 |
| C8A—C7A—H72A | 109.1 | H71B—C7B—H72B | 107.9 |
| H71A—C7A—H72A | 107.9 | C9B—C8B—C7B | 113.5 (3) |
| C9A—C8A—C7A | 113.33 (19) | C9B—C8B—H81B | 108.9 |
| C9A—C8A—H81A | 108.9 | C7B—C8B—H81B | 108.9 |
| C7A—C8A—H81A | 108.9 | C9B—C8B—H82B | 108.9 |
| C9A—C8A—H82A | 108.9 | C7B—C8B—H82B | 108.9 |
| C7A—C8A—H82A | 108.9 | H81B—C8B—H82B | 107.7 |
| H81A—C8A—H82A | 107.7 | N1B—C9B—C10B | 118.9 (2) |
| N1A—C9A—C10A | 119.28 (19) | N1B—C9B—C8B | 116.3 (2) |
| N1A—C9A—C8A | 116.81 (18) | C10B—C9B—C8B | 124.7 (2) |
| C10A—C9A—C8A | 123.91 (19) | C9B—C10B—C4B | 118.9 (2) |
| C9A—C10A—C4A | 118.3 (2) | C9B—C10B—C5B | 118.9 (3) |
| C9A—C10A—C5A | 119.6 (2) | C4B—C10B—C5B | 122.2 (3) |
| C4A—C10A—C5A | 122.1 (2) | H21—O2—H22 | 102 (3) |
| O1B—N1B—C2B | 119.10 (19) | ||
| O1A—N1A—C2A—C3A | 178.4 (2) | O1B—N1B—C2B—C3B | 179.9 (2) |
| C9A—N1A—C2A—C3A | −2.0 (4) | C9B—N1B—C2B—C3B | −0.2 (3) |
| N1A—C2A—C3A—C4A | 0.9 (4) | N1B—C2B—C3B—C4B | 0.4 (4) |
| C2A—C3A—C4A—C10A | 0.3 (4) | C2B—C3B—C4B—C10B | −0.5 (4) |
| C10A—C5A—C6A—C7A | 49.6 (3) | C10B—C5B—C6B—C7B | 52.8 (3) |
| C5A—C6A—C7A—C8A | −59.9 (3) | C5B—C6B—C7B—C8B | −61.4 (3) |
| C6A—C7A—C8A—C9A | 38.5 (3) | C6B—C7B—C8B—C9B | 37.8 (3) |
| O1A—N1A—C9A—C10A | −178.6 (2) | O1B—N1B—C9B—C10B | −179.94 (19) |
| C2A—N1A—C9A—C10A | 1.7 (4) | C2B—N1B—C9B—C10B | 0.1 (3) |
| O1A—N1A—C9A—C8A | 0.5 (3) | O1B—N1B—C9B—C8B | −1.3 (3) |
| C2A—N1A—C9A—C8A | −179.2 (2) | C2B—N1B—C9B—C8B | 178.68 (18) |
| C7A—C8A—C9A—N1A | 172.3 (2) | C7B—C8B—C9B—N1B | 174.06 (19) |
| C7A—C8A—C9A—C10A | −8.7 (4) | C7B—C8B—C9B—C10B | −7.4 (3) |
| N1A—C9A—C10A—C4A | −0.5 (4) | N1B—C9B—C10B—C4B | −0.2 (3) |
| C8A—C9A—C10A—C4A | −179.5 (2) | C8B—C9B—C10B—C4B | −178.7 (2) |
| N1A—C9A—C10A—C5A | 178.5 (2) | N1B—C9B—C10B—C5B | 178.77 (19) |
| C8A—C9A—C10A—C5A | −0.6 (4) | C8B—C9B—C10B—C5B | 0.3 (3) |
| C3A—C4A—C10A—C9A | −0.5 (4) | C3B—C4B—C10B—C9B | 0.4 (3) |
| C3A—C4A—C10A—C5A | −179.4 (3) | C3B—C4B—C10B—C5B | −178.5 (2) |
| C6A—C5A—C10A—C9A | −19.7 (4) | C6B—C5B—C10B—C9B | −22.2 (3) |
| C6A—C5A—C10A—C4A | 159.2 (3) | C6B—C5B—C10B—C4B | 156.8 (3) |
| H··· | ||||
| O2—H21···O1A | 0.96 (3) | 1.87 (3) | 2.825 (3) | 170 (3) |
| O2—H22···O1B | 0.95 (4) | 1.86 (3) | 2.799 (3) | 170 (3) |
| C2B—H2B···O1A | 0.93 | 2.53 | 3.454 (3) | 171 |
| C3A—H3A···O2i | 0.93 | 2.50 | 3.392 (3) | 160 |
| C3B—H3B···O2ii | 0.93 | 2.56 | 3.342 (4) | 142 |
| C5A—H52A···O1Biii | 0.97 | 2.49 | 3.383 (4) | 153 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H21⋯O1 | 0.96 (3) | 1.87 (3) | 2.825 (3) | 170 (3) |
| O2—H22⋯O1 | 0.95 (4) | 1.86 (3) | 2.799 (3) | 170 (3) |
| C2 | 0.93 | 2.53 | 3.454 (3) | 171 |
| C3 | 0.93 | 2.50 | 3.392 (3) | 160 |
| C3 | 0.93 | 2.56 | 3.342 (4) | 142 |
| C5 | 0.97 | 2.49 | 3.383 (4) | 153 |
Symmetry codes: (i) ; (ii) ; (iii) .