| Literature DB >> 21580621 |
Hanène Hemissi, Mohammed Rzaigui, Salem S Al-Deyab.
Abstract
In the title compound, 2C(6)H(10)N(2) (2+)·P(4)O(12) (4-), which involves a doubly protonated 3-ammonio-methyl-pyridinium cation and a cyclo-tetra-phosphate anion, the cyclo-tetra-phospho-ric ring is arranged around an inversion center and the organic entity alternates with it, forming hybrid ribbons parallel to the b axis. The crystal structure is stabilized by a three-dimensional network of N-H⋯O and weaker C-H⋯O hydrogen bonds.Entities:
Year: 2010 PMID: 21580621 PMCID: PMC2984079 DOI: 10.1107/S1600536810008056
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| 2C6H10N22+·P4O124− | |
| Triclinic, | |
| Hall symbol: -P 1 | Ag |
| Cell parameters from 25 reflections | |
| θ = 9.0–10.7° | |
| µ = 0.23 mm−1 | |
| α = 113.24 (2)° | |
| β = 98.73 (3)° | Prism, colourless |
| γ = 108.76 (3)° | 0.35 × 0.3 × 0.15 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: Enraf–Nonius FR590 | θmax = 28.0°, θmin = 2.2° |
| graphite | |
| non–profiled ω scans | |
| 7923 measured reflections | |
| 5005 independent reflections | 2 standard reflections every 120 min |
| 3963 reflections with | intensity decay: 1% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 5005 reflections | (Δ/σ)max = 0.001 |
| 145 parameters | Δρmax = 0.49 e Å−3 |
| 0 restraints | Δρmin = −0.47 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O4 | 0.14028 (12) | 0.17020 (14) | 0.16858 (12) | 0.02591 (17) | |
| O2 | 0.20484 (12) | 0.04327 (13) | −0.08942 (12) | 0.02816 (18) | |
| O1 | 0.07961 (14) | 0.30061 (15) | −0.02599 (13) | 0.03096 (19) | |
| O3 | 0.41615 (12) | 0.37060 (14) | 0.12629 (14) | 0.0328 (2) | |
| O5 | −0.09804 (14) | 0.30451 (14) | 0.25390 (12) | 0.02842 (18) | |
| O6 | 0.01424 (14) | 0.12073 (17) | 0.37735 (13) | 0.0330 (2) | |
| P1 | 0.21242 (4) | 0.23999 (4) | 0.04410 (4) | 0.02125 (7) | |
| P2 | −0.03708 (4) | 0.15037 (4) | 0.23497 (4) | 0.02013 (7) | |
| N2 | 0.71399 (14) | 0.34670 (15) | 1.01546 (13) | 0.02438 (18) | |
| H2A | 0.7405 | 0.3187 | 1.0954 | 0.037* | |
| H2B | 0.6259 | 0.3920 | 1.0259 | 0.037* | |
| H2C | 0.8188 | 0.4345 | 1.0204 | 0.037* | |
| N1 | 0.37134 (15) | 0.21366 (16) | 0.52122 (14) | 0.0284 (2) | |
| H1 | 0.2559 | 0.1902 | 0.4771 | 0.034* | |
| C1 | 0.41069 (16) | 0.17716 (18) | 0.64460 (16) | 0.0259 (2) | |
| H1A | 0.3140 | 0.1291 | 0.6824 | 0.031* | |
| C4 | 0.6907 (2) | 0.3225 (2) | 0.53050 (17) | 0.0320 (3) | |
| H4 | 0.7847 | 0.3727 | 0.4913 | 0.038* | |
| C6 | 0.64164 (17) | 0.17070 (18) | 0.85588 (16) | 0.0264 (2) | |
| H6A | 0.5287 | 0.0744 | 0.8515 | 0.032* | |
| H6B | 0.7369 | 0.1203 | 0.8456 | 0.032* | |
| C2 | 0.59489 (16) | 0.21046 (16) | 0.71693 (14) | 0.02293 (19) | |
| C5 | 0.5057 (2) | 0.28559 (19) | 0.46376 (16) | 0.0309 (2) | |
| H5 | 0.4735 | 0.3106 | 0.3784 | 0.037* | |
| C3 | 0.73527 (17) | 0.28345 (19) | 0.65771 (16) | 0.0288 (2) | |
| H3 | 0.8598 | 0.3064 | 0.7034 | 0.035* |
| O4 | 0.0190 (3) | 0.0374 (5) | 0.0315 (4) | 0.0132 (3) | 0.0114 (3) | 0.0233 (4) |
| O2 | 0.0190 (3) | 0.0275 (4) | 0.0306 (4) | 0.0079 (3) | 0.0068 (3) | 0.0089 (3) |
| O1 | 0.0281 (4) | 0.0376 (5) | 0.0413 (5) | 0.0170 (4) | 0.0131 (4) | 0.0284 (4) |
| O3 | 0.0174 (3) | 0.0290 (4) | 0.0409 (5) | 0.0034 (3) | 0.0105 (3) | 0.0109 (4) |
| O5 | 0.0331 (4) | 0.0325 (4) | 0.0273 (4) | 0.0199 (4) | 0.0114 (4) | 0.0157 (4) |
| O6 | 0.0267 (4) | 0.0532 (6) | 0.0328 (5) | 0.0175 (4) | 0.0104 (4) | 0.0320 (5) |
| P1 | 0.01556 (11) | 0.02324 (13) | 0.02726 (14) | 0.00693 (9) | 0.00856 (10) | 0.01444 (11) |
| P2 | 0.01707 (11) | 0.02625 (13) | 0.02125 (13) | 0.00966 (10) | 0.00632 (9) | 0.01460 (11) |
| N2 | 0.0213 (4) | 0.0309 (5) | 0.0267 (4) | 0.0122 (3) | 0.0078 (3) | 0.0180 (4) |
| N1 | 0.0235 (4) | 0.0314 (5) | 0.0285 (5) | 0.0109 (4) | 0.0019 (4) | 0.0152 (4) |
| C1 | 0.0198 (4) | 0.0305 (5) | 0.0293 (5) | 0.0101 (4) | 0.0065 (4) | 0.0167 (5) |
| C4 | 0.0303 (6) | 0.0337 (6) | 0.0281 (6) | 0.0080 (5) | 0.0117 (5) | 0.0146 (5) |
| C6 | 0.0250 (5) | 0.0289 (5) | 0.0287 (5) | 0.0123 (4) | 0.0054 (4) | 0.0172 (4) |
| C2 | 0.0197 (4) | 0.0245 (5) | 0.0235 (5) | 0.0091 (4) | 0.0047 (4) | 0.0114 (4) |
| C5 | 0.0360 (6) | 0.0298 (6) | 0.0248 (5) | 0.0116 (5) | 0.0055 (5) | 0.0143 (5) |
| C3 | 0.0201 (4) | 0.0345 (6) | 0.0284 (6) | 0.0092 (4) | 0.0073 (4) | 0.0137 (5) |
| O4—P2 | 1.5992 (10) | N1—C5 | 1.3393 (19) |
| O4—P1 | 1.6057 (10) | N1—H1 | 0.8600 |
| O2—P2i | 1.6044 (14) | C1—C2 | 1.3875 (17) |
| O2—P1 | 1.6085 (11) | C1—H1A | 0.9300 |
| O1—P1 | 1.4766 (10) | C4—C5 | 1.372 (2) |
| O3—P1 | 1.4781 (12) | C4—C3 | 1.389 (2) |
| O5—P2 | 1.4739 (10) | C4—H4 | 0.9300 |
| O6—P2 | 1.4824 (10) | C6—C2 | 1.4990 (17) |
| P2—O2i | 1.6044 (14) | C6—H6A | 0.9700 |
| N2—C6 | 1.4894 (18) | C6—H6B | 0.9700 |
| N2—H2A | 0.8900 | C2—C3 | 1.3875 (18) |
| N2—H2B | 0.8900 | C5—H5 | 0.9300 |
| N2—H2C | 0.8900 | C3—H3 | 0.9300 |
| N1—C1 | 1.3345 (17) | ||
| P2—O4—P1 | 136.26 (6) | C5—N1—H1 | 118.9 |
| P2i—O2—P1 | 134.03 (6) | N1—C1—C2 | 120.46 (12) |
| O1—P1—O3 | 120.41 (7) | N1—C1—H1A | 119.8 |
| O1—P1—O4 | 110.99 (6) | C2—C1—H1A | 119.8 |
| O3—P1—O4 | 106.65 (6) | C5—C4—C3 | 118.82 (13) |
| O1—P1—O2 | 111.42 (7) | C5—C4—H4 | 120.6 |
| O3—P1—O2 | 105.82 (7) | C3—C4—H4 | 120.6 |
| O4—P1—O2 | 99.36 (6) | N2—C6—C2 | 111.53 (10) |
| O5—P2—O6 | 119.04 (7) | N2—C6—H6A | 109.3 |
| O5—P2—O4 | 112.23 (6) | C2—C6—H6A | 109.3 |
| O6—P2—O4 | 105.42 (6) | N2—C6—H6B | 109.3 |
| O5—P2—O2i | 106.33 (6) | C2—C6—H6B | 109.3 |
| O6—P2—O2i | 109.45 (7) | H6A—C6—H6B | 108.0 |
| O4—P2—O2i | 103.28 (6) | C3—C2—C1 | 117.98 (11) |
| C6—N2—H2A | 109.5 | C3—C2—C6 | 120.87 (11) |
| C6—N2—H2B | 109.5 | C1—C2—C6 | 121.15 (11) |
| H2A—N2—H2B | 109.5 | N1—C5—C4 | 120.20 (12) |
| C6—N2—H2C | 109.5 | N1—C5—H5 | 119.9 |
| H2A—N2—H2C | 109.5 | C4—C5—H5 | 119.9 |
| H2B—N2—H2C | 109.5 | C2—C3—C4 | 120.36 (12) |
| C1—N1—C5 | 122.18 (11) | C2—C3—H3 | 119.8 |
| C1—N1—H1 | 118.9 | C4—C3—H3 | 119.8 |
| H··· | ||||
| N1—H1···O6 | 0.86 | 1.77 | 2.6294 (18) | 175 |
| N2—H2A···O5ii | 0.89 | 1.88 | 2.7079 (17) | 154 |
| N2—H2B···O3iii | 0.89 | 2.02 | 2.7350 (17) | 137 |
| N2—H2C···O1iv | 0.89 | 2.08 | 2.831 (2) | 141 |
| C1—H1A···O6v | 0.93 | 2.55 | 3.381 (2) | 149 |
| C4—H4···O5vi | 0.93 | 2.48 | 3.281 (2) | 144 |
| C5—H5···O4 | 0.93 | 2.60 | 3.256 (2) | 128 |
| C6—H6B···O1ii | 0.97 | 2.44 | 3.117 (2) | 127 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O6 | 0.86 | 1.77 | 2.6294 (18) | 175 |
| N2—H2 | 0.89 | 1.88 | 2.7079 (17) | 154 |
| N2—H2 | 0.89 | 2.02 | 2.7350 (17) | 137 |
| N2—H2 | 0.89 | 2.08 | 2.831 (2) | 141 |
| C1—H1 | 0.93 | 2.55 | 3.381 (2) | 149 |
| C4—H4⋯O5v | 0.93 | 2.48 | 3.281 (2) | 144 |
| C5—H5⋯O4 | 0.93 | 2.60 | 3.256 (2) | 128 |
| C6—H6 | 0.97 | 2.44 | 3.117 (2) | 127 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .