| Literature DB >> 21580607 |
Mukesh M Jotani, Bharat B Baldaniya, Edward R T Tiekink.
Abstract
In the title mol-ecule, C(25)H(22)N(2)O(5)S, the atoms of the thia-zolopyrimidine ring system, with the exception of the phenyl-bearing C atom [deviation = 0.177 (2) Å], are essentially planar [r.m.s deviation = 0.100 (2) °] and the mean plane of these atoms forms dihedral angles of 89.86 (10) and 7.97 (8)° with the phenyl and benzene rings, respectively. In the crystal, co-operative C-H⋯O and C-H⋯π inter-actions lead to a supra-molecular chain along the a axis. These chains are connected via π-π inter-actions [centroid-centroid = 3.7523 (13) Å].Entities:
Year: 2010 PMID: 21580607 PMCID: PMC2983806 DOI: 10.1107/S1600536810007853
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C25H22N2O5S | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 5176 reflections | |
| θ = 2.2–31.3° | |
| µ = 0.18 mm−1 | |
| α = 87.939 (2)° | |
| β = 89.680 (2)° | Block, yellow |
| γ = 75.287 (2)° | 0.47 × 0.35 × 0.20 mm |
| Bruker SMART APEX CCD diffractometer | 3969 independent reflections |
| Radiation source: fine-focus sealed tube | 3438 reflections with |
| graphite | |
| ω and φ scans | θmax = 25.0°, θmin = 1.4° |
| Absorption correction: multi-scan ( | |
| 20701 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3969 reflections | (Δ/σ)max = 0.002 |
| 301 parameters | Δρmax = 0.36 e Å−3 |
| 0 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.19582 (7) | 0.35035 (6) | 0.10853 (4) | 0.0550 (2) | |
| O1 | 0.8697 (2) | 0.4977 (2) | 0.28339 (16) | 0.0886 (6) | |
| O2 | 0.87965 (18) | 0.27940 (18) | 0.33559 (11) | 0.0604 (4) | |
| O3 | 0.44199 (18) | 0.03161 (15) | 0.25695 (11) | 0.0563 (4) | |
| O4 | −0.00662 (19) | −0.14186 (16) | 0.17321 (11) | 0.0590 (4) | |
| O5 | −0.1285 (3) | −0.0711 (3) | 0.30616 (14) | 0.1097 (9) | |
| N1 | 0.4187 (2) | 0.4897 (2) | 0.14656 (13) | 0.0568 (5) | |
| N2 | 0.45080 (18) | 0.25926 (16) | 0.21508 (10) | 0.0387 (4) | |
| C1 | 0.3732 (2) | 0.3754 (2) | 0.16117 (13) | 0.0447 (5) | |
| C2 | 0.5865 (2) | 0.2654 (2) | 0.27852 (12) | 0.0383 (4) | |
| H2 | 0.6743 | 0.1775 | 0.2736 | 0.046* | |
| C3 | 0.6520 (2) | 0.3922 (2) | 0.24663 (13) | 0.0433 (4) | |
| C4 | 0.5692 (3) | 0.4949 (2) | 0.18730 (15) | 0.0524 (5) | |
| C5 | 0.5251 (2) | 0.2766 (2) | 0.37843 (12) | 0.0377 (4) | |
| C6 | 0.4075 (3) | 0.3956 (2) | 0.40504 (15) | 0.0496 (5) | |
| H6 | 0.3675 | 0.4700 | 0.3618 | 0.060* | |
| C7 | 0.3486 (3) | 0.4053 (3) | 0.49501 (17) | 0.0640 (6) | |
| H7 | 0.2689 | 0.4858 | 0.5121 | 0.077* | |
| C8 | 0.4071 (3) | 0.2968 (3) | 0.55903 (16) | 0.0664 (7) | |
| H8 | 0.3666 | 0.3029 | 0.6196 | 0.080* | |
| C9 | 0.5252 (4) | 0.1794 (3) | 0.53393 (16) | 0.0690 (7) | |
| H9 | 0.5663 | 0.1062 | 0.5779 | 0.083* | |
| C10 | 0.5843 (3) | 0.1683 (2) | 0.44344 (15) | 0.0552 (5) | |
| H10 | 0.6640 | 0.0875 | 0.4267 | 0.066* | |
| C11 | 0.8095 (3) | 0.3985 (2) | 0.28807 (14) | 0.0492 (5) | |
| C12 | 1.0308 (3) | 0.2780 (3) | 0.38364 (18) | 0.0651 (6) | |
| H12A | 1.1119 | 0.2944 | 0.3392 | 0.078* | |
| H12B | 1.0113 | 0.3533 | 0.4284 | 0.078* | |
| C13 | 1.0905 (4) | 0.1404 (4) | 0.4313 (3) | 0.1057 (12) | |
| H13A | 1.0139 | 0.1285 | 0.4789 | 0.158* | |
| H13B | 1.1952 | 0.1352 | 0.4593 | 0.158* | |
| H13C | 1.1019 | 0.0661 | 0.3872 | 0.158* | |
| C14 | 0.6204 (4) | 0.6257 (3) | 0.1538 (2) | 0.0819 (9) | |
| H14A | 0.7278 | 0.6218 | 0.1777 | 0.123* | |
| H14B | 0.5436 | 0.7094 | 0.1755 | 0.123* | |
| H14C | 0.6227 | 0.6296 | 0.0868 | 0.123* | |
| C15 | 0.3839 (2) | 0.1429 (2) | 0.21508 (13) | 0.0409 (4) | |
| C16 | 0.2306 (2) | 0.1780 (2) | 0.15845 (12) | 0.0417 (4) | |
| C17 | 0.1391 (2) | 0.0840 (2) | 0.15492 (13) | 0.0445 (4) | |
| H17 | 0.1848 | −0.0036 | 0.1852 | 0.053* | |
| C18 | −0.0194 (2) | 0.0952 (2) | 0.11188 (13) | 0.0437 (4) | |
| C19 | −0.0947 (2) | −0.0168 (2) | 0.12602 (14) | 0.0463 (5) | |
| C20 | −0.2463 (3) | −0.0123 (3) | 0.08936 (16) | 0.0563 (5) | |
| H20 | −0.2943 | −0.0877 | 0.1009 | 0.068* | |
| C21 | −0.3265 (3) | 0.1051 (3) | 0.03518 (16) | 0.0563 (6) | |
| H21 | −0.4290 | 0.1089 | 0.0099 | 0.068* | |
| C22 | −0.2554 (3) | 0.2161 (3) | 0.01856 (15) | 0.0555 (5) | |
| H22 | −0.3092 | 0.2948 | −0.0184 | 0.067* | |
| C23 | −0.1045 (3) | 0.2112 (2) | 0.05660 (15) | 0.0516 (5) | |
| H23 | −0.0580 | 0.2876 | 0.0450 | 0.062* | |
| C24 | −0.0289 (3) | −0.1560 (3) | 0.26542 (18) | 0.0612 (6) | |
| C25 | 0.0891 (4) | −0.2840 (3) | 0.3062 (2) | 0.0810 (8) | |
| H25A | 0.1858 | −0.2582 | 0.3265 | 0.122* | |
| H25B | 0.1185 | −0.3553 | 0.2599 | 0.122* | |
| H25C | 0.0396 | −0.3214 | 0.3585 | 0.122* |
| S1 | 0.0523 (3) | 0.0583 (4) | 0.0560 (3) | −0.0191 (3) | −0.0217 (2) | 0.0164 (3) |
| O1 | 0.0699 (12) | 0.0833 (13) | 0.1248 (17) | −0.0447 (11) | −0.0285 (11) | 0.0212 (12) |
| O2 | 0.0430 (8) | 0.0730 (11) | 0.0683 (10) | −0.0222 (7) | −0.0161 (7) | 0.0111 (8) |
| O3 | 0.0549 (9) | 0.0473 (8) | 0.0666 (10) | −0.0140 (7) | −0.0186 (7) | 0.0120 (7) |
| O4 | 0.0563 (9) | 0.0499 (9) | 0.0684 (10) | −0.0095 (7) | −0.0008 (7) | −0.0001 (7) |
| O5 | 0.1234 (19) | 0.1067 (17) | 0.0643 (12) | 0.0321 (15) | 0.0107 (12) | 0.0131 (11) |
| N1 | 0.0579 (11) | 0.0560 (11) | 0.0592 (11) | −0.0222 (9) | −0.0177 (9) | 0.0186 (9) |
| N2 | 0.0374 (8) | 0.0434 (9) | 0.0353 (8) | −0.0103 (7) | −0.0055 (6) | 0.0019 (6) |
| C1 | 0.0444 (11) | 0.0503 (11) | 0.0394 (10) | −0.0129 (9) | −0.0074 (8) | 0.0067 (8) |
| C2 | 0.0333 (9) | 0.0426 (10) | 0.0384 (9) | −0.0083 (7) | −0.0053 (7) | 0.0013 (8) |
| C3 | 0.0408 (10) | 0.0516 (11) | 0.0400 (10) | −0.0163 (9) | 0.0025 (8) | −0.0018 (8) |
| C4 | 0.0555 (12) | 0.0577 (13) | 0.0483 (11) | −0.0237 (10) | −0.0045 (9) | 0.0095 (9) |
| C5 | 0.0342 (9) | 0.0437 (10) | 0.0373 (9) | −0.0139 (8) | −0.0059 (7) | 0.0011 (8) |
| C6 | 0.0470 (11) | 0.0524 (12) | 0.0470 (11) | −0.0083 (9) | −0.0027 (9) | −0.0003 (9) |
| C7 | 0.0581 (14) | 0.0772 (16) | 0.0566 (14) | −0.0151 (12) | 0.0098 (11) | −0.0174 (12) |
| C8 | 0.0754 (16) | 0.0904 (19) | 0.0425 (12) | −0.0371 (15) | 0.0078 (11) | −0.0091 (12) |
| C9 | 0.0877 (18) | 0.0779 (17) | 0.0437 (12) | −0.0279 (15) | −0.0091 (12) | 0.0177 (11) |
| C10 | 0.0588 (13) | 0.0547 (13) | 0.0485 (12) | −0.0088 (10) | −0.0059 (10) | 0.0078 (10) |
| C11 | 0.0420 (11) | 0.0611 (13) | 0.0471 (11) | −0.0179 (10) | 0.0036 (9) | −0.0022 (10) |
| C12 | 0.0417 (12) | 0.0902 (18) | 0.0647 (15) | −0.0188 (12) | −0.0125 (10) | −0.0020 (13) |
| C13 | 0.088 (2) | 0.102 (2) | 0.128 (3) | −0.0310 (19) | −0.055 (2) | 0.030 (2) |
| C14 | 0.092 (2) | 0.0854 (19) | 0.0819 (18) | −0.0525 (17) | −0.0265 (15) | 0.0380 (15) |
| C15 | 0.0426 (10) | 0.0446 (11) | 0.0357 (9) | −0.0116 (8) | −0.0018 (8) | −0.0004 (8) |
| C16 | 0.0420 (10) | 0.0487 (11) | 0.0336 (9) | −0.0100 (8) | −0.0038 (7) | −0.0010 (8) |
| C17 | 0.0452 (11) | 0.0487 (11) | 0.0399 (10) | −0.0125 (9) | −0.0057 (8) | 0.0006 (8) |
| C18 | 0.0439 (10) | 0.0515 (11) | 0.0365 (9) | −0.0129 (9) | −0.0018 (8) | −0.0051 (8) |
| C19 | 0.0461 (11) | 0.0487 (11) | 0.0443 (11) | −0.0118 (9) | −0.0001 (8) | −0.0040 (9) |
| C20 | 0.0498 (12) | 0.0614 (14) | 0.0629 (13) | −0.0231 (10) | −0.0017 (10) | −0.0055 (11) |
| C21 | 0.0424 (11) | 0.0719 (15) | 0.0565 (13) | −0.0172 (10) | −0.0071 (9) | −0.0070 (11) |
| C22 | 0.0530 (12) | 0.0635 (14) | 0.0487 (12) | −0.0126 (11) | −0.0120 (9) | 0.0030 (10) |
| C23 | 0.0533 (12) | 0.0564 (12) | 0.0483 (11) | −0.0205 (10) | −0.0099 (9) | 0.0038 (9) |
| C24 | 0.0591 (14) | 0.0552 (14) | 0.0684 (15) | −0.0133 (11) | −0.0091 (12) | 0.0029 (11) |
| C25 | 0.0785 (18) | 0.0565 (15) | 0.105 (2) | −0.0147 (13) | −0.0237 (16) | 0.0202 (14) |
| S1—C16 | 1.747 (2) | C9—H9 | 0.9300 |
| S1—C1 | 1.752 (2) | C10—H10 | 0.9300 |
| O1—C11 | 1.194 (3) | C12—C13 | 1.447 (4) |
| O2—C11 | 1.321 (3) | C12—H12A | 0.9700 |
| O2—C12 | 1.448 (3) | C12—H12B | 0.9700 |
| O3—C15 | 1.204 (2) | C13—H13A | 0.9600 |
| O4—C24 | 1.341 (3) | C13—H13B | 0.9600 |
| O4—C19 | 1.402 (2) | C13—H13C | 0.9600 |
| O5—C24 | 1.183 (3) | C14—H14A | 0.9600 |
| N1—C1 | 1.270 (3) | C14—H14B | 0.9600 |
| N1—C4 | 1.412 (3) | C14—H14C | 0.9600 |
| N2—C1 | 1.363 (2) | C15—C16 | 1.487 (3) |
| N2—C15 | 1.382 (2) | C16—C17 | 1.336 (3) |
| N2—C2 | 1.479 (2) | C17—C18 | 1.451 (3) |
| C2—C5 | 1.518 (2) | C17—H17 | 0.9300 |
| C2—C3 | 1.523 (3) | C18—C23 | 1.391 (3) |
| C2—H2 | 0.9800 | C18—C19 | 1.397 (3) |
| C3—C4 | 1.339 (3) | C19—C20 | 1.373 (3) |
| C3—C11 | 1.473 (3) | C20—C21 | 1.380 (3) |
| C4—C14 | 1.501 (3) | C20—H20 | 0.9300 |
| C5—C10 | 1.373 (3) | C21—C22 | 1.370 (3) |
| C5—C6 | 1.379 (3) | C21—H21 | 0.9300 |
| C6—C7 | 1.377 (3) | C22—C23 | 1.375 (3) |
| C6—H6 | 0.9300 | C22—H22 | 0.9300 |
| C7—C8 | 1.364 (4) | C23—H23 | 0.9300 |
| C7—H7 | 0.9300 | C24—C25 | 1.481 (3) |
| C8—C9 | 1.365 (4) | C25—H25A | 0.9600 |
| C8—H8 | 0.9300 | C25—H25B | 0.9600 |
| C9—C10 | 1.385 (3) | C25—H25C | 0.9600 |
| C16—S1—C1 | 91.39 (9) | C12—C13—H13A | 109.5 |
| C11—O2—C12 | 116.05 (18) | C12—C13—H13B | 109.5 |
| C24—O4—C19 | 118.48 (17) | H13A—C13—H13B | 109.5 |
| C1—N1—C4 | 116.62 (18) | C12—C13—H13C | 109.5 |
| C1—N2—C15 | 116.40 (16) | H13A—C13—H13C | 109.5 |
| C1—N2—C2 | 121.05 (16) | H13B—C13—H13C | 109.5 |
| C15—N2—C2 | 122.13 (15) | C4—C14—H14A | 109.5 |
| N1—C1—N2 | 126.93 (18) | C4—C14—H14B | 109.5 |
| N1—C1—S1 | 121.26 (15) | H14A—C14—H14B | 109.5 |
| N2—C1—S1 | 111.80 (14) | C4—C14—H14C | 109.5 |
| N2—C2—C5 | 109.63 (14) | H14A—C14—H14C | 109.5 |
| N2—C2—C3 | 107.89 (15) | H14B—C14—H14C | 109.5 |
| C5—C2—C3 | 112.53 (15) | O3—C15—N2 | 123.80 (17) |
| N2—C2—H2 | 108.9 | O3—C15—C16 | 126.21 (18) |
| C5—C2—H2 | 108.9 | N2—C15—C16 | 109.98 (16) |
| C3—C2—H2 | 108.9 | C17—C16—C15 | 119.85 (18) |
| C4—C3—C11 | 121.68 (19) | C17—C16—S1 | 129.76 (16) |
| C4—C3—C2 | 122.34 (18) | C15—C16—S1 | 110.33 (14) |
| C11—C3—C2 | 115.93 (17) | C16—C17—C18 | 130.97 (19) |
| C3—C4—N1 | 122.26 (19) | C16—C17—H17 | 114.5 |
| C3—C4—C14 | 126.5 (2) | C18—C17—H17 | 114.5 |
| N1—C4—C14 | 111.25 (19) | C23—C18—C19 | 116.47 (18) |
| C10—C5—C6 | 118.94 (18) | C23—C18—C17 | 124.65 (19) |
| C10—C5—C2 | 120.72 (17) | C19—C18—C17 | 118.87 (18) |
| C6—C5—C2 | 120.33 (17) | C20—C19—C18 | 122.2 (2) |
| C7—C6—C5 | 120.7 (2) | C20—C19—O4 | 119.12 (19) |
| C7—C6—H6 | 119.6 | C18—C19—O4 | 118.50 (18) |
| C5—C6—H6 | 119.6 | C19—C20—C21 | 119.4 (2) |
| C8—C7—C6 | 120.0 (2) | C19—C20—H20 | 120.3 |
| C8—C7—H7 | 120.0 | C21—C20—H20 | 120.3 |
| C6—C7—H7 | 120.0 | C22—C21—C20 | 120.1 (2) |
| C7—C8—C9 | 119.8 (2) | C22—C21—H21 | 119.9 |
| C7—C8—H8 | 120.1 | C20—C21—H21 | 119.9 |
| C9—C8—H8 | 120.1 | C21—C22—C23 | 120.0 (2) |
| C8—C9—C10 | 120.5 (2) | C21—C22—H22 | 120.0 |
| C8—C9—H9 | 119.8 | C23—C22—H22 | 120.0 |
| C10—C9—H9 | 119.8 | C22—C23—C18 | 121.9 (2) |
| C5—C10—C9 | 120.0 (2) | C22—C23—H23 | 119.1 |
| C5—C10—H10 | 120.0 | C18—C23—H23 | 119.1 |
| C9—C10—H10 | 120.0 | O5—C24—O4 | 121.8 (2) |
| O1—C11—O2 | 121.8 (2) | O5—C24—C25 | 126.7 (3) |
| O1—C11—C3 | 126.4 (2) | O4—C24—C25 | 111.4 (2) |
| O2—C11—C3 | 111.81 (18) | C24—C25—H25A | 109.5 |
| C13—C12—O2 | 108.6 (2) | C24—C25—H25B | 109.5 |
| C13—C12—H12A | 110.0 | H25A—C25—H25B | 109.5 |
| O2—C12—H12A | 110.0 | C24—C25—H25C | 109.5 |
| C13—C12—H12B | 110.0 | H25A—C25—H25C | 109.5 |
| O2—C12—H12B | 110.0 | H25B—C25—H25C | 109.5 |
| H12A—C12—H12B | 108.4 | ||
| C4—N1—C1—N2 | 2.8 (3) | C12—O2—C11—C3 | −176.56 (17) |
| C4—N1—C1—S1 | −175.81 (16) | C4—C3—C11—O1 | 9.3 (4) |
| C15—N2—C1—N1 | −175.5 (2) | C2—C3—C11—O1 | −168.3 (2) |
| C2—N2—C1—N1 | 11.7 (3) | C4—C3—C11—O2 | −172.59 (19) |
| C15—N2—C1—S1 | 3.2 (2) | C2—C3—C11—O2 | 9.8 (2) |
| C2—N2—C1—S1 | −169.56 (13) | C11—O2—C12—C13 | −179.7 (2) |
| C16—S1—C1—N1 | 177.52 (19) | C1—N2—C15—O3 | 177.60 (18) |
| C16—S1—C1—N2 | −1.30 (15) | C2—N2—C15—O3 | −9.7 (3) |
| C1—N2—C2—C5 | 103.91 (19) | C1—N2—C15—C16 | −3.7 (2) |
| C15—N2—C2—C5 | −68.5 (2) | C2—N2—C15—C16 | 168.97 (15) |
| C1—N2—C2—C3 | −18.9 (2) | O3—C15—C16—C17 | 3.7 (3) |
| C15—N2—C2—C3 | 168.69 (16) | N2—C15—C16—C17 | −174.93 (17) |
| N2—C2—C3—C4 | 15.1 (3) | O3—C15—C16—S1 | −178.82 (17) |
| C5—C2—C3—C4 | −106.0 (2) | N2—C15—C16—S1 | 2.55 (19) |
| N2—C2—C3—C11 | −167.40 (15) | C1—S1—C16—C17 | 176.4 (2) |
| C5—C2—C3—C11 | 71.5 (2) | C1—S1—C16—C15 | −0.73 (14) |
| C11—C3—C4—N1 | 179.53 (19) | C15—C16—C17—C18 | 174.58 (18) |
| C2—C3—C4—N1 | −3.1 (3) | S1—C16—C17—C18 | −2.3 (3) |
| C11—C3—C4—C14 | 0.7 (4) | C16—C17—C18—C23 | 5.5 (3) |
| C2—C3—C4—C14 | 178.1 (2) | C16—C17—C18—C19 | −174.4 (2) |
| C1—N1—C4—C3 | −7.1 (3) | C23—C18—C19—C20 | −1.4 (3) |
| C1—N1—C4—C14 | 171.9 (2) | C17—C18—C19—C20 | 178.47 (19) |
| N2—C2—C5—C10 | 114.6 (2) | C23—C18—C19—O4 | 173.64 (17) |
| C3—C2—C5—C10 | −125.3 (2) | C17—C18—C19—O4 | −6.5 (3) |
| N2—C2—C5—C6 | −64.7 (2) | C24—O4—C19—C20 | −89.8 (2) |
| C3—C2—C5—C6 | 55.3 (2) | C24—O4—C19—C18 | 94.9 (2) |
| C10—C5—C6—C7 | −0.7 (3) | C18—C19—C20—C21 | 1.3 (3) |
| C2—C5—C6—C7 | 178.63 (19) | O4—C19—C20—C21 | −173.78 (19) |
| C5—C6—C7—C8 | 0.3 (4) | C19—C20—C21—C22 | −0.2 (3) |
| C6—C7—C8—C9 | 0.6 (4) | C20—C21—C22—C23 | −0.6 (3) |
| C7—C8—C9—C10 | −1.1 (4) | C21—C22—C23—C18 | 0.4 (3) |
| C6—C5—C10—C9 | 0.3 (3) | C19—C18—C23—C22 | 0.6 (3) |
| C2—C5—C10—C9 | −179.1 (2) | C17—C18—C23—C22 | −179.28 (19) |
| C8—C9—C10—C5 | 0.6 (4) | C19—O4—C24—O5 | 5.5 (4) |
| C12—O2—C11—O1 | 1.7 (3) | C19—O4—C24—C25 | −172.2 (2) |
| Cg1 is the centroid of the S1/C1/N2/C15/C16 ring. |
| H··· | ||||
| C2—H2···O5i | 0.98 | 2.58 | 3.532 (3) | 163 |
| C12—H12a···Cg1i | 0.97 | 2.98 | 3.902 (3) | 160 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the S1/C1/N2/C15/C16 ring.
| H⋯ | ||||
|---|---|---|---|---|
| C2—H2⋯O5i | 0.98 | 2.58 | 3.532 (3) | 163 |
| C12—H12a⋯ | 0.97 | 2.98 | 3.902 (3) | 160 |
Symmetry code: (i) .