| Literature DB >> 21580550 |
Mei Du, Yan-Li Wang, Bing-Xin Liu, Duan-Jun Xu.
Abstract
In the title compound, [Zn(C(4)H(5)O(2))Cl(C(6)H(6)N(4)S(2))]·H(2)O, the Zn(II) cation is coordinated by a bidentate diamino-bithia-zole (DABT) ligand, a but-2-enoate anion and a Cl(-) anion in a distorted tetra-hedral geometry. Within the DABT ligand, the two thia-zole rings are twisted to each other at a dihedral angle of 4.38 (10)°. An intra-molecular N-H⋯O inter-action occurs. The centroid-centroid distance of 3.6650 (17) Å and partially overlapped arrangement between nearly parallel thia-zole rings of adjacent complexes indicate the existence of π-π stacking in the crystal structure. Extensive O-H⋯Cl, O-H⋯O, N-H⋯Cl and N-H⋯O hydrogen bonding helps to stabilize the crystal structure.Entities:
Year: 2010 PMID: 21580550 PMCID: PMC2984061 DOI: 10.1107/S160053681001113X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Zn(C4H5O2)Cl(C6H6N4S2)]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 3446 reflections |
| θ = 2.0–24.6° | |
| µ = 2.04 mm−1 | |
| β = 99.252 (16)° | Block, yellow |
| 0.36 × 0.30 × 0.24 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 2735 independent reflections |
| Radiation source: fine-focus sealed tube | 2293 reflections with |
| graphite | |
| ω scans | θmax = 25.0°, θmin = 2.0° |
| Absorption correction: multi-scan ( | |
| 7862 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2735 reflections | (Δ/σ)max = 0.002 |
| 191 parameters | Δρmax = 0.71 e Å−3 |
| 0 restraints | Δρmin = −0.45 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Zn | 0.77894 (5) | 0.12724 (2) | 0.64617 (2) | 0.03260 (13) | |
| Cl1 | 1.01129 (13) | 0.21725 (6) | 0.67179 (7) | 0.0541 (3) | |
| S1 | 0.93933 (12) | −0.14538 (5) | 0.65212 (7) | 0.0433 (2) | |
| S2 | 0.56191 (12) | 0.09881 (5) | 0.30033 (6) | 0.0418 (2) | |
| N1 | 0.8456 (3) | 0.00649 (15) | 0.64140 (17) | 0.0314 (6) | |
| N2 | 0.9835 (4) | −0.03495 (18) | 0.8057 (2) | 0.0483 (7) | |
| H2A | 0.9737 | 0.0134 | 0.8305 | 0.058* | |
| H2B | 1.0326 | −0.0740 | 0.8447 | 0.058* | |
| N3 | 0.6716 (3) | 0.10813 (15) | 0.49432 (17) | 0.0299 (5) | |
| N4 | 0.5365 (4) | 0.22969 (16) | 0.4215 (2) | 0.0444 (7) | |
| H4A | 0.5508 | 0.2545 | 0.4796 | 0.053* | |
| H4B | 0.4859 | 0.2549 | 0.3670 | 0.053* | |
| O1 | 0.5737 (3) | 0.15367 (14) | 0.72007 (17) | 0.0471 (6) | |
| O2 | 0.7729 (4) | 0.11162 (17) | 0.8535 (2) | 0.0630 (7) | |
| O1W | 0.4071 (4) | 0.29467 (17) | 0.6138 (2) | 0.0726 (8) | |
| H1A | 0.2909 | 0.2835 | 0.6079 | 0.087* | |
| H1B | 0.4522 | 0.2592 | 0.6587 | 0.087* | |
| C1 | 0.9224 (4) | −0.04933 (19) | 0.7066 (2) | 0.0351 (7) | |
| C2 | 0.8373 (4) | −0.10659 (19) | 0.5354 (2) | 0.0396 (8) | |
| H2 | 0.8137 | −0.1368 | 0.4751 | 0.047* | |
| C3 | 0.7965 (4) | −0.02684 (18) | 0.5437 (2) | 0.0316 (7) | |
| C4 | 0.7091 (4) | 0.02855 (18) | 0.4637 (2) | 0.0309 (7) | |
| C5 | 0.6607 (4) | 0.0136 (2) | 0.3637 (2) | 0.0386 (7) | |
| H5 | 0.6782 | −0.0363 | 0.3325 | 0.046* | |
| C6 | 0.5924 (4) | 0.15275 (19) | 0.4159 (2) | 0.0333 (7) | |
| C7 | 0.6148 (5) | 0.1325 (2) | 0.8138 (3) | 0.0448 (8) | |
| C8 | 0.4511 (6) | 0.1316 (2) | 0.8698 (3) | 0.0541 (9) | |
| H8 | 0.3377 | 0.1509 | 0.8357 | 0.065* | |
| C9 | 0.4583 (6) | 0.1061 (2) | 0.9613 (3) | 0.0623 (11) | |
| H9 | 0.5745 | 0.0909 | 0.9963 | 0.075* | |
| C10 | 0.2972 (7) | 0.0984 (3) | 1.0172 (3) | 0.0724 (13) | |
| H10A | 0.3061 | 0.1397 | 1.0696 | 0.109* | |
| H10B | 0.2981 | 0.0450 | 1.0479 | 0.109* | |
| H10C | 0.1834 | 0.1057 | 0.9702 | 0.109* |
| Zn | 0.0384 (2) | 0.0298 (2) | 0.0298 (2) | −0.00060 (15) | 0.00584 (14) | −0.00417 (15) |
| Cl1 | 0.0597 (6) | 0.0545 (6) | 0.0507 (5) | −0.0236 (4) | 0.0161 (4) | −0.0186 (4) |
| S1 | 0.0460 (5) | 0.0295 (4) | 0.0551 (5) | 0.0035 (4) | 0.0103 (4) | 0.0042 (4) |
| S2 | 0.0460 (5) | 0.0489 (5) | 0.0286 (4) | −0.0057 (4) | 0.0004 (3) | −0.0015 (4) |
| N1 | 0.0353 (14) | 0.0292 (13) | 0.0305 (13) | −0.0011 (11) | 0.0076 (10) | 0.0008 (11) |
| N2 | 0.0629 (19) | 0.0439 (17) | 0.0357 (15) | 0.0110 (14) | 0.0010 (13) | 0.0064 (13) |
| N3 | 0.0316 (13) | 0.0310 (13) | 0.0279 (12) | −0.0041 (11) | 0.0069 (10) | −0.0008 (10) |
| N4 | 0.0572 (18) | 0.0363 (16) | 0.0371 (15) | 0.0029 (13) | 0.0001 (13) | 0.0059 (12) |
| O1 | 0.0528 (15) | 0.0469 (14) | 0.0449 (14) | 0.0028 (11) | 0.0173 (11) | −0.0083 (11) |
| O2 | 0.0653 (19) | 0.0609 (17) | 0.0627 (17) | 0.0061 (14) | 0.0103 (14) | −0.0015 (14) |
| O1W | 0.0642 (18) | 0.072 (2) | 0.084 (2) | −0.0139 (15) | 0.0188 (15) | −0.0228 (16) |
| C1 | 0.0323 (17) | 0.0348 (17) | 0.0397 (18) | −0.0008 (14) | 0.0100 (13) | 0.0035 (14) |
| C2 | 0.046 (2) | 0.0319 (18) | 0.0428 (18) | −0.0028 (14) | 0.0115 (15) | −0.0064 (14) |
| C3 | 0.0298 (16) | 0.0315 (17) | 0.0353 (16) | −0.0052 (13) | 0.0110 (12) | −0.0043 (13) |
| C4 | 0.0310 (16) | 0.0304 (16) | 0.0329 (16) | −0.0055 (13) | 0.0098 (12) | −0.0025 (13) |
| C5 | 0.0449 (19) | 0.0372 (18) | 0.0343 (17) | −0.0060 (15) | 0.0081 (14) | −0.0069 (14) |
| C6 | 0.0337 (17) | 0.0347 (17) | 0.0309 (16) | −0.0053 (13) | 0.0038 (13) | 0.0006 (13) |
| C7 | 0.056 (2) | 0.0315 (18) | 0.050 (2) | −0.0028 (16) | 0.0166 (17) | −0.0093 (16) |
| C8 | 0.062 (2) | 0.051 (2) | 0.051 (2) | 0.0083 (18) | 0.0151 (18) | −0.0034 (18) |
| C9 | 0.079 (3) | 0.050 (2) | 0.062 (3) | 0.014 (2) | 0.022 (2) | 0.002 (2) |
| C10 | 0.097 (3) | 0.063 (3) | 0.069 (3) | 0.017 (2) | 0.048 (3) | 0.011 (2) |
| Zn—O1 | 1.961 (2) | O1—C7 | 1.275 (4) |
| Zn—N1 | 2.029 (2) | O2—C7 | 1.234 (4) |
| Zn—N3 | 2.060 (2) | O1W—H1A | 0.8564 |
| Zn—Cl1 | 2.2223 (9) | O1W—H1B | 0.8550 |
| S1—C2 | 1.723 (3) | C2—C3 | 1.340 (4) |
| S1—C1 | 1.735 (3) | C2—H2 | 0.9300 |
| S2—C5 | 1.718 (3) | C3—C4 | 1.457 (4) |
| S2—C6 | 1.747 (3) | C4—C5 | 1.336 (4) |
| N1—C1 | 1.315 (4) | C5—H5 | 0.9300 |
| N1—C3 | 1.395 (4) | C7—C8 | 1.502 (5) |
| N2—C1 | 1.336 (4) | C8—C9 | 1.273 (5) |
| N2—H2A | 0.8600 | C8—H8 | 0.9300 |
| N2—H2B | 0.8600 | C9—C10 | 1.490 (5) |
| N3—C6 | 1.321 (4) | C9—H9 | 0.9300 |
| N3—C4 | 1.398 (4) | C10—H10A | 0.9600 |
| N4—C6 | 1.323 (4) | C10—H10B | 0.9600 |
| N4—H4A | 0.8600 | C10—H10C | 0.9600 |
| N4—H4B | 0.8600 | ||
| O1—Zn—N1 | 115.69 (10) | C2—C3—N1 | 115.2 (3) |
| O1—Zn—N3 | 108.68 (10) | C2—C3—C4 | 128.1 (3) |
| N1—Zn—N3 | 83.01 (9) | N1—C3—C4 | 116.7 (2) |
| O1—Zn—Cl1 | 113.65 (7) | C5—C4—N3 | 115.0 (3) |
| N1—Zn—Cl1 | 117.66 (7) | C5—C4—C3 | 128.5 (3) |
| N3—Zn—Cl1 | 114.11 (7) | N3—C4—C3 | 116.5 (2) |
| C2—S1—C1 | 89.60 (15) | C4—C5—S2 | 111.1 (2) |
| C5—S2—C6 | 89.66 (15) | C4—C5—H5 | 124.5 |
| C1—N1—C3 | 111.0 (2) | S2—C5—H5 | 124.5 |
| C1—N1—Zn | 136.7 (2) | N3—C6—N4 | 125.2 (3) |
| C3—N1—Zn | 112.28 (18) | N3—C6—S2 | 112.9 (2) |
| C1—N2—H2A | 120.0 | N4—C6—S2 | 121.9 (2) |
| C1—N2—H2B | 120.0 | O2—C7—O1 | 123.1 (3) |
| H2A—N2—H2B | 120.0 | O2—C7—C8 | 123.1 (3) |
| C6—N3—C4 | 111.3 (2) | O1—C7—C8 | 113.7 (3) |
| C6—N3—Zn | 137.1 (2) | C9—C8—C7 | 124.0 (4) |
| C4—N3—Zn | 111.23 (18) | C9—C8—H8 | 118.0 |
| C6—N4—H4A | 120.0 | C7—C8—H8 | 118.0 |
| C6—N4—H4B | 120.0 | C8—C9—C10 | 125.8 (4) |
| H4A—N4—H4B | 120.0 | C8—C9—H9 | 117.1 |
| C7—O1—Zn | 110.3 (2) | C10—C9—H9 | 117.1 |
| H1A—O1W—H1B | 100.6 | C9—C10—H10A | 109.5 |
| N1—C1—N2 | 124.2 (3) | C9—C10—H10B | 109.5 |
| N1—C1—S1 | 113.6 (2) | H10A—C10—H10B | 109.5 |
| N2—C1—S1 | 122.1 (2) | C9—C10—H10C | 109.5 |
| C3—C2—S1 | 110.6 (2) | H10A—C10—H10C | 109.5 |
| C3—C2—H2 | 124.7 | H10B—C10—H10C | 109.5 |
| S1—C2—H2 | 124.7 |
| H··· | ||||
| O1W—H1A···Cl1i | 0.86 | 2.56 | 3.345 (3) | 152 |
| O1W—H1B···O1 | 0.86 | 2.04 | 2.859 (4) | 160 |
| N2—H2A···O2 | 0.86 | 2.22 | 2.959 (4) | 144 |
| N2—H2B···O1Wii | 0.86 | 2.23 | 3.032 (4) | 154 |
| N4—H4A···O1W | 0.86 | 2.30 | 3.043 (4) | 145 |
| N4—H4B···Cl1iii | 0.86 | 2.66 | 3.393 (3) | 144 |
Selected bond lengths (Å)
| Zn—O1 | 1.961 (2) |
| Zn—N1 | 2.029 (2) |
| Zn—N3 | 2.060 (2) |
| Zn—Cl1 | 2.2223 (9) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.86 | 2.56 | 3.345 (3) | 152 |
| O1 | 0.86 | 2.04 | 2.859 (4) | 160 |
| N2—H2 | 0.86 | 2.22 | 2.959 (4) | 144 |
| N2—H2 | 0.86 | 2.23 | 3.032 (4) | 154 |
| N4—H4 | 0.86 | 2.30 | 3.043 (4) | 145 |
| N4—H4 | 0.86 | 2.66 | 3.393 (3) | 144 |
Symmetry codes: (i) ; (ii) ; (iii) .