Literature DB >> 21580275

Bis(μ-imino-diacetato)bis-[(2,2'-diamino-4,4'-bi-1,3-thia-zole)lead(II)] tetra-hydrate.

Mei Du, Bing-Xin Liu, Jing-Jing Nie, Duan-Jun Xu.   

Abstract

In the crystal structure of the title compound, [Pb(2)(C(4)H(5)NO(4))(2)(C(6)H(6)N(4)S(2))(2)]·4H(2)O, the dinuclear Pb(II) complex mol-ecule is centrosymmetric. The Pb atom is chelated by a tridentate imino-diacetate anion (IDA) and a diamino-bithia-zole (DABT) ligand, while a carboxyl-ate O atom from an adjacent IDA anion further bridges the Pb atom with a longer Pb-O bond [2.892 (3) Å]. The lone-pair electrons of the Pb atom occupy an axial site in the Ψ-penta-gonal-bipyramidal coordination polyhedron. The IDA anion displays a facial configuration: its chelating five-membered rings assume an envelope configuration. Within the DABT ligand, the two thia-zole rings are twisted relative to each other, making a dihedral angle of 9.51 (17)°. Extensive N-H⋯O, O-H⋯O and weak C-H⋯O hydrogen bonding helps to stabilize the crystal structure.

Entities:  

Year:  2010        PMID: 21580275      PMCID: PMC2983700          DOI: 10.1107/S1600536810006926

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the potential applications of metal complexes of diamino­bithia­zole in the field of biology, see: Waring (1981 ▶); Fisher et al. (1985 ▶). For PbII complexes with a similar coordination geometry, see: Lacouture et al. (2001 ▶); Jones et al. (1988 ▶). For a complex with a longer Pb—O bond distance [2.968 (4) Å], see: Inoue et al. (1993 ▶). For the dihedral angles between thia­zole rings in diamino­bithia­zole complexes, see: Liu et al. (2006 ▶); Zhang et al. (2006 ▶).

Experimental

Crystal data

[Pb2(C4H5NO4)2(C6H6N4S2)2]·4H2O M = 1145.16 Triclinic, a = 9.2241 (8) Å b = 9.8526 (9) Å c = 10.6380 (11) Å α = 77.0732 (12)° β = 67.4141 (15)° γ = 69.0690 (12)° V = 829.54 (14) Å3 Z = 1 Mo Kα radiation μ = 10.46 mm−1 T = 295 K 0.20 × 0.12 × 0.10 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.132, T max = 0.350 5960 measured reflections 2878 independent reflections 2745 reflections with I > 2σ(I) R int = 0.021

Refinement

R[F 2 > 2σ(F 2)] = 0.020 wR(F 2) = 0.048 S = 1.07 2878 reflections 244 parameters 9 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.54 e Å−3 Δρmin = −0.70 e Å−3 Data collection: PROCESS-AUTO (Rigaku, 1998 ▶); cell refinement: PROCESS-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SIR92 (Altomare et al., 1993 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810006926/ng2733sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810006926/ng2733Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pb2(C4H5NO4)2(C6H6N4S2)2]·4H2OZ = 1
Mr = 1145.16F(000) = 544
Triclinic, P1Dx = 2.292 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 9.2241 (8) ÅCell parameters from 4336 reflections
b = 9.8526 (9) Åθ = 2.1–24.6°
c = 10.6380 (11) ŵ = 10.46 mm1
α = 77.0732 (12)°T = 295 K
β = 67.4141 (15)°Block, yellow
γ = 69.0690 (12)°0.20 × 0.12 × 0.10 mm
V = 829.54 (14) Å3
Rigaku R-AXIS RAPID diffractometer2878 independent reflections
Radiation source: fine-focus sealed tube2745 reflections with I > 2σ(I)
graphiteRint = 0.021
Detector resolution: 10.00 pixels mm-1θmax = 25.0°, θmin = 2.1°
ω scansh = −10→10
Absorption correction: multi-scan (ABSCOR; Higashi, 1995)k = −11→11
Tmin = 0.132, Tmax = 0.350l = −12→12
5960 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.020Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.048H atoms treated by a mixture of independent and constrained refinement
S = 1.07w = 1/[σ2(Fo2) + (0.019P)2 + 0.7917P] where P = (Fo2 + 2Fc2)/3
2878 reflections(Δ/σ)max = 0.001
244 parametersΔρmax = 0.54 e Å3
9 restraintsΔρmin = −0.70 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pb0.545731 (18)0.724630 (15)0.424338 (14)0.02919 (7)
S10.85653 (18)1.10157 (14)0.16319 (14)0.0551 (3)
S20.70556 (17)0.84111 (15)0.78711 (13)0.0513 (3)
O10.6288 (4)0.4760 (3)0.5554 (3)0.0400 (7)
O20.8401 (5)0.2774 (4)0.5652 (4)0.0696 (11)
O30.5809 (4)0.7154 (3)0.1777 (3)0.0431 (7)
O40.6770 (6)0.5550 (4)0.0268 (4)0.0714 (12)
O1W0.7380 (5)1.1758 (4)−0.1588 (4)0.0577 (9)
O2W1.0741 (5)0.6671 (5)0.1186 (5)0.0717 (11)
N10.7119 (4)0.9098 (4)0.3108 (4)0.0359 (8)
N20.7160 (6)0.9566 (5)0.0832 (4)0.0541 (11)
N30.6755 (4)0.7770 (4)0.5787 (3)0.0357 (8)
N40.5919 (6)0.6270 (5)0.7807 (4)0.0563 (11)
N50.8084 (4)0.5688 (4)0.2998 (4)0.0355 (8)
C10.7507 (5)0.9781 (5)0.1862 (4)0.0382 (10)
C20.8435 (6)1.0598 (5)0.3335 (5)0.0494 (12)
H20.88411.10270.37700.059*
C30.7666 (5)0.9569 (5)0.3947 (4)0.0372 (10)
C40.6525 (6)0.7362 (5)0.7099 (4)0.0399 (10)
C50.7564 (6)0.9461 (5)0.6339 (5)0.0461 (11)
H50.79341.02620.62060.055*
C60.7354 (5)0.8967 (4)0.5350 (5)0.0368 (10)
C110.7810 (6)0.4004 (5)0.5131 (4)0.0370 (10)
C120.8948 (6)0.4667 (5)0.3912 (5)0.0418 (10)
H12A0.94430.51830.42290.050*
H12B0.98270.38920.34000.050*
C130.7855 (6)0.4939 (5)0.2072 (4)0.0408 (10)
H13A0.73930.41620.25990.049*
H13B0.89190.44990.14200.049*
C140.6733 (6)0.5959 (5)0.1303 (4)0.0427 (11)
H110.768 (8)1.197 (7)−0.2418 (10)0.080*
H120.6393 (18)1.220 (6)−0.132 (6)0.080*
H211.124 (7)0.724 (5)0.113 (7)0.080*
H221.147 (6)0.594 (4)0.086 (7)0.080*
H2A0.662 (6)0.895 (5)0.101 (6)0.080*
H2B0.751 (8)0.997 (6)0.001 (2)0.080*
H4A0.582 (7)0.570 (5)0.736 (5)0.080*
H4B0.595 (7)0.598 (6)0.862 (2)0.080*
H5N0.865 (6)0.626 (5)0.247 (5)0.080*
U11U22U33U12U13U23
Pb0.03072 (10)0.03010 (10)0.02682 (10)−0.00792 (7)−0.01080 (7)−0.00292 (6)
S10.0619 (9)0.0475 (7)0.0531 (7)−0.0305 (6)−0.0092 (6)0.0054 (6)
S20.0594 (8)0.0592 (8)0.0430 (7)−0.0105 (6)−0.0248 (6)−0.0183 (6)
O10.0430 (19)0.0399 (17)0.0384 (17)−0.0150 (15)−0.0159 (14)0.0016 (13)
O20.070 (3)0.051 (2)0.064 (2)−0.0008 (19)−0.025 (2)0.0136 (19)
O30.051 (2)0.0448 (18)0.0352 (16)−0.0102 (15)−0.0218 (15)−0.0005 (14)
O40.110 (3)0.068 (2)0.049 (2)−0.016 (2)−0.046 (2)−0.0134 (19)
O1W0.063 (2)0.059 (2)0.054 (2)−0.0169 (19)−0.030 (2)0.0050 (19)
O2W0.062 (3)0.076 (3)0.074 (3)−0.035 (2)−0.002 (2)−0.013 (2)
N10.040 (2)0.0315 (18)0.0362 (19)−0.0136 (16)−0.0107 (16)−0.0017 (15)
N20.068 (3)0.058 (3)0.039 (2)−0.030 (2)−0.019 (2)0.010 (2)
N30.038 (2)0.041 (2)0.0309 (18)−0.0143 (16)−0.0126 (16)−0.0041 (15)
N40.081 (3)0.066 (3)0.032 (2)−0.033 (3)−0.026 (2)0.007 (2)
N50.034 (2)0.039 (2)0.035 (2)−0.0125 (16)−0.0138 (16)−0.0001 (16)
C10.038 (2)0.033 (2)0.037 (2)−0.0107 (19)−0.0072 (19)−0.0009 (18)
C20.050 (3)0.046 (3)0.058 (3)−0.024 (2)−0.013 (2)−0.010 (2)
C30.034 (2)0.035 (2)0.040 (2)−0.0065 (19)−0.0086 (19)−0.0115 (19)
C40.043 (3)0.047 (3)0.032 (2)−0.008 (2)−0.015 (2)−0.010 (2)
C50.052 (3)0.044 (3)0.051 (3)−0.012 (2)−0.024 (2)−0.014 (2)
C60.033 (2)0.034 (2)0.045 (2)−0.0053 (18)−0.015 (2)−0.0113 (19)
C110.043 (3)0.038 (2)0.034 (2)−0.008 (2)−0.021 (2)−0.0024 (19)
C120.038 (3)0.048 (3)0.042 (2)−0.012 (2)−0.021 (2)0.001 (2)
C130.049 (3)0.040 (2)0.036 (2)−0.009 (2)−0.019 (2)−0.0080 (19)
C140.054 (3)0.045 (3)0.032 (2)−0.020 (2)−0.014 (2)0.000 (2)
Pb—O12.546 (3)N2—H2A0.86 (6)
Pb—O1i2.892 (3)N2—H2B0.86 (3)
Pb—O32.536 (3)N3—C41.318 (5)
Pb—N12.593 (3)N3—C61.391 (5)
Pb—N32.594 (3)N4—C41.335 (6)
Pb—N52.402 (4)N4—H4A0.86 (5)
S1—C21.732 (5)N4—H4B0.86 (3)
S1—C11.739 (4)N5—C131.468 (5)
S2—C51.718 (5)N5—C121.475 (5)
S2—C41.741 (4)N5—H5N0.86 (5)
O1—C111.283 (5)C2—C31.348 (6)
O2—C111.237 (5)C2—H20.9300
O3—C141.259 (5)C3—C61.435 (6)
O4—C141.239 (5)C5—C61.354 (6)
O1W—H110.819 (16)C5—H50.9300
O1W—H120.82 (5)C11—C121.509 (6)
O2W—H210.82 (7)C12—H12A0.9700
O2W—H220.82 (5)C12—H12B0.9700
N1—C11.321 (5)C13—C141.513 (6)
N1—C31.403 (5)C13—H13A0.9700
N2—C11.331 (6)C13—H13B0.9700
N5—Pb—O366.12 (11)N1—C1—S1114.6 (3)
N5—Pb—O167.04 (11)N2—C1—S1120.7 (3)
O3—Pb—O1114.56 (10)C3—C2—S1110.9 (4)
N5—Pb—N178.68 (11)C3—C2—H2124.5
O3—Pb—N181.95 (10)S1—C2—H2124.5
O1—Pb—N1128.64 (10)C2—C3—N1115.0 (4)
N5—Pb—N390.68 (12)C2—C3—C6125.7 (4)
O3—Pb—N3143.48 (11)N1—C3—C6119.3 (4)
O1—Pb—N377.56 (10)N3—C4—N4124.6 (4)
N1—Pb—N365.44 (11)N3—C4—S2113.7 (3)
C2—S1—C189.0 (2)N4—C4—S2121.7 (3)
C5—S2—C489.4 (2)C6—C5—S2111.0 (4)
C11—O1—Pb116.9 (3)C6—C5—H5124.5
C14—O3—Pb114.4 (3)S2—C5—H5124.5
H11—O1W—H12105 (6)C5—C6—N3114.7 (4)
H21—O2W—H22104 (6)C5—C6—C3126.4 (4)
C1—N1—C3110.4 (4)N3—C6—C3119.0 (4)
C1—N1—Pb132.4 (3)O2—C11—O1124.6 (4)
C3—N1—Pb117.1 (3)O2—C11—C12118.1 (4)
C1—N2—H2A116 (4)O1—C11—C12117.3 (4)
C1—N2—H2B122 (4)N5—C12—C11112.3 (4)
H2A—N2—H2B121 (6)N5—C12—H12A109.1
C4—N3—C6111.2 (4)C11—C12—H12A109.1
C4—N3—Pb128.8 (3)N5—C12—H12B109.1
C6—N3—Pb116.8 (3)C11—C12—H12B109.1
C4—N4—H4A118 (4)H12A—C12—H12B107.9
C4—N4—H4B119 (4)N5—C13—C14112.6 (4)
H4A—N4—H4B119 (6)N5—C13—H13A109.1
C13—N5—C12112.7 (3)C14—C13—H13A109.1
C13—N5—Pb109.0 (3)N5—C13—H13B109.1
C12—N5—Pb112.3 (3)C14—C13—H13B109.1
C13—N5—H5N105 (4)H13A—C13—H13B107.8
C12—N5—H5N111 (4)O4—C14—O3124.8 (5)
Pb—N5—H5N106 (4)O4—C14—C13117.8 (4)
N1—C1—N2124.7 (4)O3—C14—C13117.4 (4)
D—H···AD—HH···AD···AD—H···A
N2—H2A···O30.86 (6)2.05 (5)2.880 (6)162 (5)
N2—H2B···O1W0.86 (3)2.16 (4)2.959 (6)153 (6)
N4—H4A···O10.86 (5)2.15 (5)2.946 (5)155 (5)
N4—H4B···O4ii0.86 (3)2.07 (5)2.885 (7)159 (6)
N5—H5N···O2W0.87 (5)2.01 (6)2.809 (7)153 (4)
O1W—H11···O2iii0.82 (2)1.97 (2)2.783 (6)171 (5)
O1W—H12···O3iv0.82 (5)2.11 (4)2.819 (6)144 (5)
O2W—H21···O1Wv0.82 (7)2.10 (7)2.892 (7)161 (6)
O2W—H22···O4vi0.82 (5)1.95 (5)2.766 (6)168 (7)
C5—H5···O2vii0.932.563.476 (6)167
Table 1

Selected bond lengths (Å)

Pb—O12.546 (3)
Pb—O1i2.892 (3)
Pb—O32.536 (3)
Pb—N12.593 (3)
Pb—N32.594 (3)
Pb—N52.402 (4)

Symmetry code: (i) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2A⋯O30.86 (6)2.05 (5)2.880 (6)162 (5)
N2—H2B⋯O1W0.86 (3)2.16 (4)2.959 (6)153 (6)
N4—H4A⋯O10.86 (5)2.15 (5)2.946 (5)155 (5)
N4—H4B⋯O4ii0.86 (3)2.07 (5)2.885 (7)159 (6)
N5—H5N⋯O2W0.87 (5)2.01 (6)2.809 (7)153 (4)
O1W—H11⋯O2iii0.82 (2)1.97 (2)2.783 (6)171 (5)
O1W—H12⋯O3iv0.82 (5)2.11 (4)2.819 (6)144 (5)
O2W—H21⋯O1Wv0.82 (7)2.10 (7)2.892 (7)161 (6)
O2W—H22⋯O4vi0.82 (5)1.95 (5)2.766 (6)168 (7)
C5—H5⋯O2vii0.932.563.476 (6)167

Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .

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