| Literature DB >> 21580275 |
Mei Du, Bing-Xin Liu, Jing-Jing Nie, Duan-Jun Xu.
Abstract
In the crystal structure of the title compound, [Pb(2)(C(4)H(5)NO(4))(2)(C(6)H(6)N(4)S(2))(2)]·4H(2)O, the dinuclear Pb(II) complex mol-ecule is centrosymmetric. The Pb atom is chelated by a tridentate imino-diacetate anion (IDA) and a diamino-bithia-zole (DABT) ligand, while a carboxyl-ate O atom from an adjacent IDA anion further bridges the Pb atom with a longer Pb-O bond [2.892 (3) Å]. The lone-pair electrons of the Pb atom occupy an axial site in the Ψ-penta-gonal-bipyramidal coordination polyhedron. The IDA anion displays a facial configuration: its chelating five-membered rings assume an envelope configuration. Within the DABT ligand, the two thia-zole rings are twisted relative to each other, making a dihedral angle of 9.51 (17)°. Extensive N-H⋯O, O-H⋯O and weak C-H⋯O hydrogen bonding helps to stabilize the crystal structure.Entities:
Year: 2010 PMID: 21580275 PMCID: PMC2983700 DOI: 10.1107/S1600536810006926
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Pb2(C4H5NO4)2(C6H6N4S2)2]·4H2O | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4336 reflections | |
| θ = 2.1–24.6° | |
| µ = 10.46 mm−1 | |
| α = 77.0732 (12)° | |
| β = 67.4141 (15)° | Block, yellow |
| γ = 69.0690 (12)° | 0.20 × 0.12 × 0.10 mm |
| Rigaku R-AXIS RAPID diffractometer | 2878 independent reflections |
| Radiation source: fine-focus sealed tube | 2745 reflections with |
| graphite | |
| Detector resolution: 10.00 pixels mm-1 | θmax = 25.0°, θmin = 2.1° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 5960 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2878 reflections | (Δ/σ)max = 0.001 |
| 244 parameters | Δρmax = 0.54 e Å−3 |
| 9 restraints | Δρmin = −0.70 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| Pb | 0.545731 (18) | 0.724630 (15) | 0.424338 (14) | 0.02919 (7) | |
| S1 | 0.85653 (18) | 1.10157 (14) | 0.16319 (14) | 0.0551 (3) | |
| S2 | 0.70556 (17) | 0.84111 (15) | 0.78711 (13) | 0.0513 (3) | |
| O1 | 0.6288 (4) | 0.4760 (3) | 0.5554 (3) | 0.0400 (7) | |
| O2 | 0.8401 (5) | 0.2774 (4) | 0.5652 (4) | 0.0696 (11) | |
| O3 | 0.5809 (4) | 0.7154 (3) | 0.1777 (3) | 0.0431 (7) | |
| O4 | 0.6770 (6) | 0.5550 (4) | 0.0268 (4) | 0.0714 (12) | |
| O1W | 0.7380 (5) | 1.1758 (4) | −0.1588 (4) | 0.0577 (9) | |
| O2W | 1.0741 (5) | 0.6671 (5) | 0.1186 (5) | 0.0717 (11) | |
| N1 | 0.7119 (4) | 0.9098 (4) | 0.3108 (4) | 0.0359 (8) | |
| N2 | 0.7160 (6) | 0.9566 (5) | 0.0832 (4) | 0.0541 (11) | |
| N3 | 0.6755 (4) | 0.7770 (4) | 0.5787 (3) | 0.0357 (8) | |
| N4 | 0.5919 (6) | 0.6270 (5) | 0.7807 (4) | 0.0563 (11) | |
| N5 | 0.8084 (4) | 0.5688 (4) | 0.2998 (4) | 0.0355 (8) | |
| C1 | 0.7507 (5) | 0.9781 (5) | 0.1862 (4) | 0.0382 (10) | |
| C2 | 0.8435 (6) | 1.0598 (5) | 0.3335 (5) | 0.0494 (12) | |
| H2 | 0.8841 | 1.1027 | 0.3770 | 0.059* | |
| C3 | 0.7666 (5) | 0.9569 (5) | 0.3947 (4) | 0.0372 (10) | |
| C4 | 0.6525 (6) | 0.7362 (5) | 0.7099 (4) | 0.0399 (10) | |
| C5 | 0.7564 (6) | 0.9461 (5) | 0.6339 (5) | 0.0461 (11) | |
| H5 | 0.7934 | 1.0262 | 0.6206 | 0.055* | |
| C6 | 0.7354 (5) | 0.8967 (4) | 0.5350 (5) | 0.0368 (10) | |
| C11 | 0.7810 (6) | 0.4004 (5) | 0.5131 (4) | 0.0370 (10) | |
| C12 | 0.8948 (6) | 0.4667 (5) | 0.3912 (5) | 0.0418 (10) | |
| H12A | 0.9443 | 0.5183 | 0.4229 | 0.050* | |
| H12B | 0.9827 | 0.3892 | 0.3400 | 0.050* | |
| C13 | 0.7855 (6) | 0.4939 (5) | 0.2072 (4) | 0.0408 (10) | |
| H13A | 0.7393 | 0.4162 | 0.2599 | 0.049* | |
| H13B | 0.8919 | 0.4499 | 0.1420 | 0.049* | |
| C14 | 0.6733 (6) | 0.5959 (5) | 0.1303 (4) | 0.0427 (11) | |
| H11 | 0.768 (8) | 1.197 (7) | −0.2418 (10) | 0.080* | |
| H12 | 0.6393 (18) | 1.220 (6) | −0.132 (6) | 0.080* | |
| H21 | 1.124 (7) | 0.724 (5) | 0.113 (7) | 0.080* | |
| H22 | 1.147 (6) | 0.594 (4) | 0.086 (7) | 0.080* | |
| H2A | 0.662 (6) | 0.895 (5) | 0.101 (6) | 0.080* | |
| H2B | 0.751 (8) | 0.997 (6) | 0.001 (2) | 0.080* | |
| H4A | 0.582 (7) | 0.570 (5) | 0.736 (5) | 0.080* | |
| H4B | 0.595 (7) | 0.598 (6) | 0.862 (2) | 0.080* | |
| H5N | 0.865 (6) | 0.626 (5) | 0.247 (5) | 0.080* |
| Pb | 0.03072 (10) | 0.03010 (10) | 0.02682 (10) | −0.00792 (7) | −0.01080 (7) | −0.00292 (6) |
| S1 | 0.0619 (9) | 0.0475 (7) | 0.0531 (7) | −0.0305 (6) | −0.0092 (6) | 0.0054 (6) |
| S2 | 0.0594 (8) | 0.0592 (8) | 0.0430 (7) | −0.0105 (6) | −0.0248 (6) | −0.0183 (6) |
| O1 | 0.0430 (19) | 0.0399 (17) | 0.0384 (17) | −0.0150 (15) | −0.0159 (14) | 0.0016 (13) |
| O2 | 0.070 (3) | 0.051 (2) | 0.064 (2) | −0.0008 (19) | −0.025 (2) | 0.0136 (19) |
| O3 | 0.051 (2) | 0.0448 (18) | 0.0352 (16) | −0.0102 (15) | −0.0218 (15) | −0.0005 (14) |
| O4 | 0.110 (3) | 0.068 (2) | 0.049 (2) | −0.016 (2) | −0.046 (2) | −0.0134 (19) |
| O1W | 0.063 (2) | 0.059 (2) | 0.054 (2) | −0.0169 (19) | −0.030 (2) | 0.0050 (19) |
| O2W | 0.062 (3) | 0.076 (3) | 0.074 (3) | −0.035 (2) | −0.002 (2) | −0.013 (2) |
| N1 | 0.040 (2) | 0.0315 (18) | 0.0362 (19) | −0.0136 (16) | −0.0107 (16) | −0.0017 (15) |
| N2 | 0.068 (3) | 0.058 (3) | 0.039 (2) | −0.030 (2) | −0.019 (2) | 0.010 (2) |
| N3 | 0.038 (2) | 0.041 (2) | 0.0309 (18) | −0.0143 (16) | −0.0126 (16) | −0.0041 (15) |
| N4 | 0.081 (3) | 0.066 (3) | 0.032 (2) | −0.033 (3) | −0.026 (2) | 0.007 (2) |
| N5 | 0.034 (2) | 0.039 (2) | 0.035 (2) | −0.0125 (16) | −0.0138 (16) | −0.0001 (16) |
| C1 | 0.038 (2) | 0.033 (2) | 0.037 (2) | −0.0107 (19) | −0.0072 (19) | −0.0009 (18) |
| C2 | 0.050 (3) | 0.046 (3) | 0.058 (3) | −0.024 (2) | −0.013 (2) | −0.010 (2) |
| C3 | 0.034 (2) | 0.035 (2) | 0.040 (2) | −0.0065 (19) | −0.0086 (19) | −0.0115 (19) |
| C4 | 0.043 (3) | 0.047 (3) | 0.032 (2) | −0.008 (2) | −0.015 (2) | −0.010 (2) |
| C5 | 0.052 (3) | 0.044 (3) | 0.051 (3) | −0.012 (2) | −0.024 (2) | −0.014 (2) |
| C6 | 0.033 (2) | 0.034 (2) | 0.045 (2) | −0.0053 (18) | −0.015 (2) | −0.0113 (19) |
| C11 | 0.043 (3) | 0.038 (2) | 0.034 (2) | −0.008 (2) | −0.021 (2) | −0.0024 (19) |
| C12 | 0.038 (3) | 0.048 (3) | 0.042 (2) | −0.012 (2) | −0.021 (2) | 0.001 (2) |
| C13 | 0.049 (3) | 0.040 (2) | 0.036 (2) | −0.009 (2) | −0.019 (2) | −0.0080 (19) |
| C14 | 0.054 (3) | 0.045 (3) | 0.032 (2) | −0.020 (2) | −0.014 (2) | 0.000 (2) |
| Pb—O1 | 2.546 (3) | N2—H2A | 0.86 (6) |
| Pb—O1i | 2.892 (3) | N2—H2B | 0.86 (3) |
| Pb—O3 | 2.536 (3) | N3—C4 | 1.318 (5) |
| Pb—N1 | 2.593 (3) | N3—C6 | 1.391 (5) |
| Pb—N3 | 2.594 (3) | N4—C4 | 1.335 (6) |
| Pb—N5 | 2.402 (4) | N4—H4A | 0.86 (5) |
| S1—C2 | 1.732 (5) | N4—H4B | 0.86 (3) |
| S1—C1 | 1.739 (4) | N5—C13 | 1.468 (5) |
| S2—C5 | 1.718 (5) | N5—C12 | 1.475 (5) |
| S2—C4 | 1.741 (4) | N5—H5N | 0.86 (5) |
| O1—C11 | 1.283 (5) | C2—C3 | 1.348 (6) |
| O2—C11 | 1.237 (5) | C2—H2 | 0.9300 |
| O3—C14 | 1.259 (5) | C3—C6 | 1.435 (6) |
| O4—C14 | 1.239 (5) | C5—C6 | 1.354 (6) |
| O1W—H11 | 0.819 (16) | C5—H5 | 0.9300 |
| O1W—H12 | 0.82 (5) | C11—C12 | 1.509 (6) |
| O2W—H21 | 0.82 (7) | C12—H12A | 0.9700 |
| O2W—H22 | 0.82 (5) | C12—H12B | 0.9700 |
| N1—C1 | 1.321 (5) | C13—C14 | 1.513 (6) |
| N1—C3 | 1.403 (5) | C13—H13A | 0.9700 |
| N2—C1 | 1.331 (6) | C13—H13B | 0.9700 |
| N5—Pb—O3 | 66.12 (11) | N1—C1—S1 | 114.6 (3) |
| N5—Pb—O1 | 67.04 (11) | N2—C1—S1 | 120.7 (3) |
| O3—Pb—O1 | 114.56 (10) | C3—C2—S1 | 110.9 (4) |
| N5—Pb—N1 | 78.68 (11) | C3—C2—H2 | 124.5 |
| O3—Pb—N1 | 81.95 (10) | S1—C2—H2 | 124.5 |
| O1—Pb—N1 | 128.64 (10) | C2—C3—N1 | 115.0 (4) |
| N5—Pb—N3 | 90.68 (12) | C2—C3—C6 | 125.7 (4) |
| O3—Pb—N3 | 143.48 (11) | N1—C3—C6 | 119.3 (4) |
| O1—Pb—N3 | 77.56 (10) | N3—C4—N4 | 124.6 (4) |
| N1—Pb—N3 | 65.44 (11) | N3—C4—S2 | 113.7 (3) |
| C2—S1—C1 | 89.0 (2) | N4—C4—S2 | 121.7 (3) |
| C5—S2—C4 | 89.4 (2) | C6—C5—S2 | 111.0 (4) |
| C11—O1—Pb | 116.9 (3) | C6—C5—H5 | 124.5 |
| C14—O3—Pb | 114.4 (3) | S2—C5—H5 | 124.5 |
| H11—O1W—H12 | 105 (6) | C5—C6—N3 | 114.7 (4) |
| H21—O2W—H22 | 104 (6) | C5—C6—C3 | 126.4 (4) |
| C1—N1—C3 | 110.4 (4) | N3—C6—C3 | 119.0 (4) |
| C1—N1—Pb | 132.4 (3) | O2—C11—O1 | 124.6 (4) |
| C3—N1—Pb | 117.1 (3) | O2—C11—C12 | 118.1 (4) |
| C1—N2—H2A | 116 (4) | O1—C11—C12 | 117.3 (4) |
| C1—N2—H2B | 122 (4) | N5—C12—C11 | 112.3 (4) |
| H2A—N2—H2B | 121 (6) | N5—C12—H12A | 109.1 |
| C4—N3—C6 | 111.2 (4) | C11—C12—H12A | 109.1 |
| C4—N3—Pb | 128.8 (3) | N5—C12—H12B | 109.1 |
| C6—N3—Pb | 116.8 (3) | C11—C12—H12B | 109.1 |
| C4—N4—H4A | 118 (4) | H12A—C12—H12B | 107.9 |
| C4—N4—H4B | 119 (4) | N5—C13—C14 | 112.6 (4) |
| H4A—N4—H4B | 119 (6) | N5—C13—H13A | 109.1 |
| C13—N5—C12 | 112.7 (3) | C14—C13—H13A | 109.1 |
| C13—N5—Pb | 109.0 (3) | N5—C13—H13B | 109.1 |
| C12—N5—Pb | 112.3 (3) | C14—C13—H13B | 109.1 |
| C13—N5—H5N | 105 (4) | H13A—C13—H13B | 107.8 |
| C12—N5—H5N | 111 (4) | O4—C14—O3 | 124.8 (5) |
| Pb—N5—H5N | 106 (4) | O4—C14—C13 | 117.8 (4) |
| N1—C1—N2 | 124.7 (4) | O3—C14—C13 | 117.4 (4) |
| H··· | ||||
| N2—H2A···O3 | 0.86 (6) | 2.05 (5) | 2.880 (6) | 162 (5) |
| N2—H2B···O1W | 0.86 (3) | 2.16 (4) | 2.959 (6) | 153 (6) |
| N4—H4A···O1 | 0.86 (5) | 2.15 (5) | 2.946 (5) | 155 (5) |
| N4—H4B···O4ii | 0.86 (3) | 2.07 (5) | 2.885 (7) | 159 (6) |
| N5—H5N···O2W | 0.87 (5) | 2.01 (6) | 2.809 (7) | 153 (4) |
| O1W—H11···O2iii | 0.82 (2) | 1.97 (2) | 2.783 (6) | 171 (5) |
| O1W—H12···O3iv | 0.82 (5) | 2.11 (4) | 2.819 (6) | 144 (5) |
| O2W—H21···O1Wv | 0.82 (7) | 2.10 (7) | 2.892 (7) | 161 (6) |
| O2W—H22···O4vi | 0.82 (5) | 1.95 (5) | 2.766 (6) | 168 (7) |
| C5—H5···O2vii | 0.93 | 2.56 | 3.476 (6) | 167 |
Selected bond lengths (Å)
| Pb—O1 | 2.546 (3) |
| Pb—O1i | 2.892 (3) |
| Pb—O3 | 2.536 (3) |
| Pb—N1 | 2.593 (3) |
| Pb—N3 | 2.594 (3) |
| Pb—N5 | 2.402 (4) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H2 | 0.86 (6) | 2.05 (5) | 2.880 (6) | 162 (5) |
| N2—H2 | 0.86 (3) | 2.16 (4) | 2.959 (6) | 153 (6) |
| N4—H4 | 0.86 (5) | 2.15 (5) | 2.946 (5) | 155 (5) |
| N4—H4 | 0.86 (3) | 2.07 (5) | 2.885 (7) | 159 (6) |
| N5—H5 | 0.87 (5) | 2.01 (6) | 2.809 (7) | 153 (4) |
| O1 | 0.82 (2) | 1.97 (2) | 2.783 (6) | 171 (5) |
| O1 | 0.82 (5) | 2.11 (4) | 2.819 (6) | 144 (5) |
| O2 | 0.82 (7) | 2.10 (7) | 2.892 (7) | 161 (6) |
| O2 | 0.82 (5) | 1.95 (5) | 2.766 (6) | 168 (7) |
| C5—H5⋯O2vii | 0.93 | 2.56 | 3.476 (6) | 167 |
Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) .