Literature DB >> 21580546

Potassium (1-methoxy-carbonyl-2-methyl-prop-2-en-2-yl-idene)azinate.

Cédric Reuter1, Jörg M Neudörfl, Hans-Günther Schmalz.   

Abstract

In the title compound, K(+)·C(6)H(8)NO(4) (-), the K(+) cations have a coordination number of seven and are surrounded by four bidentate azinate anions. The methyl-ene groups of the anions are always directed towards the coordinated potassium cations. The N-C-C-C torsion angle is 101.2 (2)°. The orthogonal non-conjugated nature of the salt confirms the supposed geometry and reactivity of this compound.

Entities:  

Year:  2010        PMID: 21580546      PMCID: PMC2984059          DOI: 10.1107/S1600536810010159

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For a short overview of peptidomimetics, see: Grauer et al. (2009 ▶); Vagner et al. (2008 ▶); Wu et al. (2008 ▶). For the synthesis of peptidomimetics, amino-acid-based building blocks play a key role in the assembly of these structures, see: Kemp, Boyd & Muendel (1991 ▶); Kemp, Curran et al. (1991 ▶); Beal et al. (2000 ▶); Kühne et al. (2008 ▶). A known deprotonation/proton­ation sequence (Bouveault & Wahl, 1901 ▶) was used in the synthesis of the title compound. The protonation of the title compound occurs exclusively at the α-position and no proton­ation of the methyl­ene group was observed (Baldwin et al., 1977 ▶).

Experimental

Crystal data

K+·C6H8NO4 − M = 197.23 Monoclinic, a = 23.9269 (13) Å b = 5.2909 (2) Å c = 14.2510 (7) Å β = 113.361 (2)° V = 1656.21 (14) Å3 Z = 8 Mo Kα radiation μ = 0.62 mm−1 T = 100 K 0.20 × 0.15 × 0.03 mm

Data collection

Nonius KappaCCD diffractometer 6264 measured reflections 1810 independent reflections 1416 reflections with I > 2σ(I) R int = 0.041

Refinement

R[F 2 > 2σ(F 2)] = 0.028 wR(F 2) = 0.061 S = 1.01 1810 reflections 111 parameters H-atom parameters constrained Δρmax = 0.31 e Å−3 Δρmin = −0.27 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶); cell refinement: DENZO (Otwinowski & Minor, 1997 ▶); data reduction: DENZO; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SCHAKAL99 (Keller, 1999 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶), publCIF (Westrip, 2010 ▶) and ORTEP (Davenport et al., 1999 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810010159/jj2024sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810010159/jj2024Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
K+·C6H8NO4F(000) = 816
Mr = 197.23Dx = 1.582 Mg m3
Monoclinic, Cm2/cMelting point: 180.7(10) K
Hall symbol: -C 2ycMo Kα radiation, λ = 0.71073 Å
a = 23.9269 (13) ÅCell parameters from 6264 reflections
b = 5.2909 (2) Åθ = 1.9–27.0°
c = 14.2510 (7) ŵ = 0.62 mm1
β = 113.361 (2)°T = 100 K
V = 1656.21 (14) Å3Platlet, colourless
Z = 80.20 × 0.15 × 0.03 mm
Nonius KappaCCD diffractometer1416 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.041
graphiteθmax = 27.0°, θmin = 1.9°
Phi/ω–Scans scansh = −30→30
6264 measured reflectionsk = −6→6
1810 independent reflectionsl = −18→18
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.028Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.061H-atom parameters constrained
S = 1.01w = 1/[σ2(Fo2) + (0.0266P)2] where P = (Fo2 + 2Fc2)/3
1810 reflections(Δ/σ)max = 0.001
111 parametersΔρmax = 0.31 e Å3
0 restraintsΔρmin = −0.27 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
K10.269013 (15)−0.06555 (6)0.11206 (2)0.01586 (11)
O10.22159 (5)0.42337 (19)0.06333 (8)0.0183 (3)
O20.20272 (5)0.26997 (19)0.19103 (8)0.0172 (2)
O30.15057 (5)0.81224 (18)−0.04385 (8)0.0194 (3)
O40.07200 (5)0.87761 (19)0.00265 (8)0.0191 (3)
N10.19003 (6)0.4306 (2)0.11777 (9)0.0144 (3)
C10.14436 (7)0.5975 (3)0.10141 (11)0.0142 (3)
C20.12553 (7)0.7664 (3)0.01413 (12)0.0155 (3)
C30.04879 (8)1.0606 (3)−0.07901 (12)0.0213 (4)
H3A0.00891.1211−0.08440.032*
H3B0.04460.9813−0.14360.032*
H3C0.07711.2034−0.06440.032*
C40.11349 (7)0.5958 (3)0.17409 (12)0.0164 (3)
C50.12805 (8)0.7705 (3)0.24651 (12)0.0221 (4)
H5A0.15780.89470.25160.027*
H5B0.10870.77160.29330.027*
C60.06556 (8)0.3977 (3)0.15837 (14)0.0248 (4)
H6A0.03120.42720.09300.037*
H6B0.05140.40670.21410.037*
H6C0.08280.23000.15770.037*
U11U22U33U12U13U23
K10.01789 (19)0.0171 (2)0.01396 (19)0.00072 (15)0.00778 (15)−0.00055 (14)
O10.0217 (6)0.0208 (6)0.0198 (6)0.0039 (5)0.0160 (5)0.0020 (5)
O20.0228 (6)0.0153 (6)0.0153 (6)0.0030 (5)0.0095 (5)0.0046 (5)
O30.0205 (6)0.0232 (6)0.0190 (6)0.0044 (5)0.0125 (5)0.0050 (5)
O40.0167 (6)0.0236 (6)0.0204 (6)0.0070 (5)0.0108 (5)0.0086 (5)
N10.0175 (7)0.0143 (7)0.0130 (7)−0.0020 (6)0.0076 (6)−0.0014 (6)
C10.0142 (8)0.0147 (8)0.0156 (8)0.0008 (6)0.0080 (7)0.0004 (6)
C20.0160 (9)0.0148 (8)0.0159 (8)−0.0013 (7)0.0065 (7)−0.0038 (7)
C30.0198 (9)0.0241 (9)0.0201 (9)0.0057 (8)0.0082 (8)0.0083 (7)
C40.0159 (8)0.0185 (9)0.0169 (9)0.0066 (7)0.0086 (7)0.0053 (7)
C50.0261 (10)0.0238 (9)0.0207 (9)0.0074 (7)0.0138 (8)0.0046 (7)
C60.0237 (10)0.0247 (9)0.0320 (10)0.0009 (7)0.0175 (9)0.0046 (8)
K1—O1i2.7036 (10)O4—C21.3591 (18)
K1—O2ii2.7539 (11)O4—C31.4447 (18)
K1—O3i2.7988 (11)N1—C11.3516 (19)
K1—O12.7994 (11)N1—K1iv3.2874 (12)
K1—O22.8896 (10)C1—C21.451 (2)
K1—O3iii2.8970 (12)C1—C41.4917 (19)
K1—O1iii2.9080 (11)C1—K1iv3.4260 (15)
K1—C5ii3.0584 (16)C2—K1iv3.2747 (16)
K1—N13.2542 (13)C3—H3A0.9800
K1—C2iii3.2747 (16)C3—H3B0.9800
K1—N1iii3.2874 (12)C3—H3C0.9800
K1—C4ii3.3355 (16)C4—C51.325 (2)
O1—N11.2799 (14)C4—C61.503 (2)
O1—K1i2.7036 (10)C4—K1v3.3355 (16)
O1—K1iv2.9081 (11)C5—K1v3.0583 (16)
O2—N11.2856 (15)C5—H5A0.9500
O2—K1v2.7539 (11)C5—H5B0.9500
O3—C21.2219 (16)C6—H6A0.9800
O3—K1i2.7989 (11)C6—H6B0.9800
O3—K1iv2.8970 (12)C6—H6C0.9800
O1i—K1—O2ii162.38 (3)N1—K1—C4ii93.33 (4)
O1i—K1—O3i59.21 (3)C2iii—K1—C4ii145.11 (4)
O2ii—K1—O3i106.36 (3)N1iii—K1—C4ii118.00 (3)
O1i—K1—O171.80 (3)N1—O1—K1i146.87 (9)
O2ii—K1—O1117.16 (3)N1—O1—K198.95 (7)
O3i—K1—O1127.70 (3)K1i—O1—K1108.20 (3)
O1i—K1—O2116.67 (3)N1—O1—K1iv95.49 (7)
O2ii—K1—O275.42 (2)K1i—O1—K1iv78.14 (3)
O3i—K1—O2168.78 (3)K1—O1—K1iv135.94 (4)
O1—K1—O245.40 (3)N1—O2—K1v120.14 (8)
O1i—K1—O3iii76.57 (3)N1—O2—K194.53 (7)
O2ii—K1—O3iii118.77 (3)K1v—O2—K1129.79 (4)
O3i—K1—O3iii103.16 (3)C2—O3—K1i136.99 (9)
O1—K1—O3iii80.73 (3)C2—O3—K1iv96.80 (9)
O2—K1—O3iii85.11 (3)K1i—O3—K1iv76.84 (3)
O1i—K1—O1iii101.86 (3)C2—O4—C3115.46 (12)
O2ii—K1—O1iii82.21 (3)O1—N1—O2117.81 (11)
O3i—K1—O1iii74.94 (3)O1—N1—C1123.09 (12)
O1—K1—O1iii135.94 (4)O2—N1—C1119.10 (12)
O2—K1—O1iii116.22 (3)O1—N1—K158.18 (6)
O3iii—K1—O1iii55.87 (3)O2—N1—K162.27 (7)
O1i—K1—C5ii96.14 (4)C1—N1—K1163.88 (10)
O2ii—K1—C5ii72.78 (4)O1—N1—K1iv61.71 (6)
O3i—K1—C5ii90.87 (4)O2—N1—K1iv127.10 (9)
O1—K1—C5ii76.55 (4)C1—N1—K1iv84.21 (8)
O2—K1—C5ii79.00 (4)K1—N1—K1iv107.96 (4)
O3iii—K1—C5ii157.29 (4)N1—C1—C2120.36 (13)
O1iii—K1—C5ii146.51 (4)N1—C1—C4117.74 (13)
O1i—K1—N193.48 (3)C2—C1—C4121.88 (13)
O2ii—K1—N198.04 (3)N1—C1—K1iv72.68 (8)
O3i—K1—N1150.55 (3)C2—C1—K1iv71.72 (8)
O1—K1—N122.86 (3)C4—C1—K1iv129.38 (10)
O2—K1—N123.19 (3)O3—C2—O4121.61 (14)
O3iii—K1—N178.35 (3)O3—C2—C1129.29 (14)
O1iii—K1—N1125.49 (3)O4—C2—C1109.10 (12)
C5ii—K1—N180.70 (4)O3—C2—K1iv61.45 (8)
O1i—K1—C2iii97.99 (4)O4—C2—K1iv135.44 (9)
O2ii—K1—C2iii98.10 (4)C1—C2—K1iv83.41 (9)
O3i—K1—C2iii118.31 (4)O4—C3—H3A109.5
O1—K1—C2iii83.79 (3)O4—C3—H3B109.5
O2—K1—C2iii71.83 (3)H3A—C3—H3B109.5
O3iii—K1—C2iii21.75 (3)O4—C3—H3C109.5
O1iii—K1—C2iii53.27 (3)H3A—C3—H3C109.5
C5ii—K1—C2iii150.79 (4)H3B—C3—H3C109.5
N1—K1—C2iii73.06 (3)C5—C4—C1119.13 (14)
O1i—K1—N1iii120.52 (3)C5—C4—C6123.51 (14)
O2ii—K1—N1iii68.28 (3)C1—C4—C6117.33 (13)
O3i—K1—N1iii96.40 (3)C5—C4—K1v66.48 (9)
O1—K1—N1iii125.11 (3)C1—C4—K1v99.55 (9)
O2—K1—N1iii94.52 (3)C6—C4—K1v105.93 (10)
O3iii—K1—N1iii56.00 (3)C4—C5—K1v90.11 (10)
O1iii—K1—N1iii22.80 (3)C4—C5—H5A120.0
C5ii—K1—N1iii140.88 (4)K1v—C5—H5A88.2
N1—K1—N1iii107.96 (4)C4—C5—H5B120.0
C2iii—K1—N1iii43.50 (4)K1v—C5—H5B91.7
O1i—K1—C4ii115.12 (4)H5A—C5—H5B120.0
O2ii—K1—C4ii51.13 (3)C4—C6—H6A109.5
O3i—K1—C4ii89.44 (4)C4—C6—H6B109.5
O1—K1—C4ii95.85 (4)H6A—C6—H6B109.5
O2—K1—C4ii83.16 (3)C4—C6—H6C109.5
O3iii—K1—C4ii166.33 (3)H6A—C6—H6C109.5
O1iii—K1—C4ii124.33 (4)H6B—C6—H6C109.5
C5ii—K1—C4ii23.41 (4)
O1i—K1—O1—N1160.77 (10)O1iii—K1—N1—O1−125.49 (9)
O2ii—K1—O1—N1−35.71 (9)C5ii—K1—N1—O177.40 (8)
O3i—K1—O1—N1−178.51 (7)C2iii—K1—N1—O1−115.56 (8)
O2—K1—O1—N1−10.30 (7)N1iii—K1—N1—O1−141.94 (7)
O3iii—K1—O1—N181.97 (8)C4ii—K1—N1—O197.17 (8)
O1iii—K1—O1—N172.42 (10)O1i—K1—N1—O2−179.41 (8)
C5ii—K1—O1—N1−98.01 (8)O2ii—K1—N1—O2−12.78 (9)
C2iii—K1—O1—N160.23 (8)O3i—K1—N1—O2−158.75 (8)
N1iii—K1—O1—N145.79 (8)O1—K1—N1—O2−161.15 (13)
C4ii—K1—O1—N1−84.68 (8)O3iii—K1—N1—O2105.08 (8)
O1i—K1—O1—K1i0.0O1iii—K1—N1—O273.36 (8)
O2ii—K1—O1—K1i163.52 (4)C5ii—K1—N1—O2−83.74 (8)
O3i—K1—O1—K1i20.72 (6)C2iii—K1—N1—O283.29 (8)
O2—K1—O1—K1i−171.07 (6)N1iii—K1—N1—O256.91 (9)
O3iii—K1—O1—K1i−78.80 (4)C4ii—K1—N1—O2−63.97 (8)
O1iii—K1—O1—K1i−88.35 (6)O1i—K1—N1—C181.4 (3)
C5ii—K1—O1—K1i101.21 (5)O2ii—K1—N1—C1−112.0 (3)
N1—K1—O1—K1i−160.77 (10)O3i—K1—N1—C1102.0 (3)
C2iii—K1—O1—K1i−100.54 (4)O1—K1—N1—C199.6 (4)
N1iii—K1—O1—K1i−114.98 (4)O2—K1—N1—C1−99.2 (3)
C4ii—K1—O1—K1i114.55 (4)O3iii—K1—N1—C15.9 (3)
O1i—K1—O1—K1iv−91.64 (6)O1iii—K1—N1—C1−25.9 (3)
O2ii—K1—O1—K1iv71.88 (6)C5ii—K1—N1—C1177.0 (3)
O3i—K1—O1—K1iv−70.93 (7)C2iii—K1—N1—C1−15.9 (3)
O2—K1—O1—K1iv97.29 (7)N1iii—K1—N1—C1−42.3 (4)
O3iii—K1—O1—K1iv−170.45 (6)C4ii—K1—N1—C1−163.2 (3)
O1iii—K1—O1—K1iv180.0O1i—K1—N1—K1iv−56.32 (4)
C5ii—K1—O1—K1iv9.57 (6)O2ii—K1—N1—K1iv110.31 (4)
N1—K1—O1—K1iv107.58 (10)O3i—K1—N1—K1iv−35.66 (9)
C2iii—K1—O1—K1iv167.82 (6)O1—K1—N1—K1iv−38.06 (7)
N1iii—K1—O1—K1iv153.38 (4)O2—K1—N1—K1iv123.09 (9)
C4ii—K1—O1—K1iv22.91 (6)O3iii—K1—N1—K1iv−131.83 (4)
O1i—K1—O2—N10.66 (9)O1iii—K1—N1—K1iv−163.55 (3)
O2ii—K1—O2—N1166.92 (9)C5ii—K1—N1—K1iv39.34 (4)
O3i—K1—O2—N166.31 (19)C2iii—K1—N1—K1iv−153.62 (4)
O1—K1—O2—N110.16 (7)N1iii—K1—N1—K1iv180.0
O3iii—K1—O2—N1−71.65 (8)C4ii—K1—N1—K1iv59.12 (4)
O1iii—K1—O2—N1−119.59 (8)O1—N1—C1—C25.1 (2)
C5ii—K1—O2—N192.06 (8)O2—N1—C1—C2−174.70 (13)
C2iii—K1—O2—N1−89.27 (8)K1—N1—C1—C2−84.2 (4)
N1iii—K1—O2—N1−126.92 (9)K1iv—N1—C1—C255.71 (13)
C4ii—K1—O2—N1115.38 (8)O1—N1—C1—C4−176.54 (12)
O1i—K1—O2—K1v−135.53 (5)O2—N1—C1—C43.7 (2)
O2ii—K1—O2—K1v30.73 (5)K1—N1—C1—C494.1 (3)
O3i—K1—O2—K1v−69.88 (17)K1iv—N1—C1—C4−125.94 (12)
O1—K1—O2—K1v−126.03 (7)O1—N1—C1—K1iv−50.60 (12)
O3iii—K1—O2—K1v152.16 (5)O2—N1—C1—K1iv129.60 (12)
O1iii—K1—O2—K1v104.22 (5)K1—N1—C1—K1iv−139.9 (3)
C5ii—K1—O2—K1v−44.14 (6)K1i—O3—C2—O4−153.88 (10)
N1—K1—O2—K1v−136.19 (11)K1iv—O3—C2—O4128.14 (13)
C2iii—K1—O2—K1v134.54 (6)K1i—O3—C2—C125.9 (3)
N1iii—K1—O2—K1v96.89 (5)K1iv—O3—C2—C1−52.12 (17)
C4ii—K1—O2—K1v−20.81 (5)K1i—O3—C2—K1iv77.98 (12)
K1i—O1—N1—O2163.96 (11)C3—O4—C2—O3−2.9 (2)
K1—O1—N1—O218.87 (12)C3—O4—C2—C1177.36 (12)
K1iv—O1—N1—O2−119.37 (11)C3—O4—C2—K1iv77.08 (17)
K1i—O1—N1—C1−15.8 (2)N1—C1—C2—O3−11.9 (2)
K1—O1—N1—C1−160.93 (12)C4—C1—C2—O3169.81 (15)
K1iv—O1—N1—C160.82 (14)K1iv—C1—C2—O344.26 (15)
K1i—O1—N1—K1145.09 (16)N1—C1—C2—O4167.86 (13)
K1iv—O1—N1—K1−138.24 (6)C4—C1—C2—O4−10.4 (2)
K1i—O1—N1—K1iv−76.67 (13)K1iv—C1—C2—O4−135.97 (11)
K1—O1—N1—K1iv138.24 (6)N1—C1—C2—K1iv−56.16 (13)
K1v—O2—N1—O1123.95 (10)C4—C1—C2—K1iv125.55 (13)
K1—O2—N1—O1−18.09 (12)N1—C1—C4—C5101.20 (18)
K1v—O2—N1—C1−56.24 (15)C2—C1—C4—C5−80.5 (2)
K1—O2—N1—C1161.72 (11)K1iv—C1—C4—C511.4 (2)
K1v—O2—N1—K1142.04 (8)N1—C1—C4—C6−80.71 (18)
K1v—O2—N1—K1iv49.79 (12)C2—C1—C4—C697.62 (18)
K1—O2—N1—K1iv−92.25 (8)K1iv—C1—C4—C6−170.51 (10)
O1i—K1—N1—O1−18.26 (10)N1—C1—C4—K1v32.88 (14)
O2ii—K1—N1—O1148.37 (8)C2—C1—C4—K1v−148.79 (12)
O3i—K1—N1—O12.40 (12)K1iv—C1—C4—K1v−56.92 (11)
O2—K1—N1—O1161.15 (13)C1—C4—C5—K1v−87.97 (13)
O3iii—K1—N1—O1−93.78 (8)C6—C4—C5—K1v94.06 (15)
Table 1

Selected bond lengths (Å)

K1—O1i2.7036 (10)
K1—O2ii2.7539 (11)
K1—O3i2.7988 (11)
K1—O12.7994 (11)
K1—O22.8896 (10)
K1—O3iii2.8970 (12)
K1—O1iii2.9080 (11)

Symmetry codes: (i) ; (ii) ; (iii) .

  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  The helical s constant for alanine in water derived from template-nucleated helices.

Authors:  D S Kemp; J G Boyd; C C Muendel
Journal:  Nature       Date:  1991-08-01       Impact factor: 49.962

3.  Peptidomimetics.

Authors:  Yun-Dong Wu; Sam Gellman
Journal:  Acc Chem Res       Date:  2008-10       Impact factor: 22.384

Review 4.  Peptidomimetics, a synthetic tool of drug discovery.

Authors:  Josef Vagner; Hongchang Qu; Victor J Hruby
Journal:  Curr Opin Chem Biol       Date:  2008-05-14       Impact factor: 8.822

5.  Synthesis of beta,gamma-unsaturated amino acids.

Authors:  J E Baldwin; S B Haber; C Hoskins; L I Kruse
Journal:  J Org Chem       Date:  1977-04-01       Impact factor: 4.354

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  6 in total

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