Literature DB >> 21580454

4'-(2,4-Dichloro-phen-yl)-1,1'-dimethyl-piperidine-3-spiro-3'-pyrrolidine-2'-spiro-3''-indoline-4,2''-dione.

S Nagamuthu, R Sribala, R Ranjithkumar, R V Krishnakumar, N Srinivasan.   

Abstract

In the title compound, C(23)H(23)Cl(2)N(3)O(2), the pyrroline ring adopts an envelope conformation and the piperidinone ring assumes a slightly twisted chair form. In the crystal, inversion dimers linked by pairs of N-H⋯O hydrogen bonds generate an R(2) (8) graph-set motif and a short Cl⋯Cl contact of 3.478 (1) Å occurs.

Entities:  

Year:  2010        PMID: 21580454      PMCID: PMC2983500          DOI: 10.1107/S160053681000704X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the effect on halogens on the conformations of organic mol­ecules, see: Awwadi et al. (2006 ▶). For the biological properties of pyrroles, see: Watson et al. (2001 ▶). For graph-set notation, see: Etter et al. (1990 ▶). For puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C23H23Cl2N3O2 M = 444.34 Triclinic, a = 7.9398 (2) Å b = 10.8747 (3) Å c = 13.5367 (4) Å α = 66.561 (2)° β = 77.873 (1)° γ = 83.203 (2)° V = 1047.64 (5) Å3 Z = 2 Mo Kα radiation μ = 0.34 mm−1 T = 300 K 0.27 × 0.15 × 0.12 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.94, T max = 0.96 27365 measured reflections 6685 independent reflections 5249 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.130 S = 1.03 6685 reflections 273 parameters H-atom parameters constrained Δρmax = 0.47 e Å−3 Δρmin = −0.47 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681000704X/ng2738sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681000704X/ng2738Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C23H23Cl2N3O2Z = 2
Mr = 444.34F(000) = 464
Triclinic, P1Dx = 1.409 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.9398 (2) ÅCell parameters from 5536 reflections
b = 10.8747 (3) Åθ = 5.7–61.9°
c = 13.5367 (4) ŵ = 0.34 mm1
α = 66.561 (2)°T = 300 K
β = 77.873 (1)°Needle, colourless
γ = 83.203 (2)°0.27 × 0.15 × 0.12 mm
V = 1047.64 (5) Å3
Bruker Kappa APEXII CCD diffractometer6685 independent reflections
Radiation source: fine-focus sealed tube5249 reflections with I > 2σ(I)
graphiteRint = 0.025
ω and φ scanθmax = 31.1°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −10→11
Tmin = 0.94, Tmax = 0.96k = −15→15
27365 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.044Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.130H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0652P)2 + 0.3075P] where P = (Fo2 + 2Fc2)/3
6685 reflections(Δ/σ)max = 0.001
273 parametersΔρmax = 0.47 e Å3
0 restraintsΔρmin = −0.47 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl1−0.05606 (6)0.11850 (5)−0.16644 (3)0.05328 (12)
Cl20.52639 (5)0.22216 (6)−0.08290 (4)0.05850 (14)
O10.59398 (16)0.37748 (14)0.13813 (10)0.0564 (3)
O20.01383 (13)0.08370 (10)0.35005 (9)0.0392 (2)
N10.07639 (15)0.36986 (11)0.21024 (10)0.0342 (2)
N1A0.40225 (16)0.01730 (11)0.32854 (10)0.0369 (2)
N1B0.09730 (16)0.15644 (12)0.46891 (9)0.0372 (3)
H1B0.05330.09470.52930.045*
C1A0.3736 (3)−0.12482 (15)0.36383 (15)0.0521 (4)
H70.4034−0.17250.43500.078*
H80.4440−0.15880.31270.078*
H90.2544−0.13680.36710.078*
C20.19382 (16)0.28182 (11)0.28156 (10)0.0277 (2)
C2A0.35737 (18)0.09368 (13)0.22132 (11)0.0330 (3)
H10.24830.06470.21820.040*
H20.44490.07710.16570.040*
C2B0.09267 (16)0.15968 (12)0.36880 (10)0.0312 (2)
C30.34300 (15)0.24405 (12)0.19834 (10)0.0275 (2)
C40.29884 (17)0.33178 (13)0.08305 (10)0.0317 (2)
H40.40470.37110.03340.038*
C4A0.51969 (17)0.28084 (14)0.20663 (11)0.0354 (3)
C4B0.24667 (17)0.34208 (13)0.35377 (11)0.0321 (2)
C50.1825 (2)0.44231 (13)0.10524 (11)0.0383 (3)
H5A0.24880.50870.10980.046*
H5B0.11270.48630.04890.046*
C5A0.5987 (2)0.18768 (17)0.30320 (14)0.0442 (3)
H510.54500.20690.36710.053*
H520.72040.20480.28870.053*
C5B0.18216 (18)0.26551 (14)0.46247 (11)0.0347 (3)
C6A0.5790 (2)0.04095 (17)0.32825 (14)0.0475 (4)
H610.65660.01490.27360.057*
H620.6093−0.01340.39920.057*
C6B0.3263 (2)0.45973 (15)0.32860 (14)0.0451 (3)
H6B0.36950.51290.25630.054*
C7B0.3409 (3)0.49719 (19)0.41348 (18)0.0583 (5)
H7B0.39400.57630.39760.070*
C8B0.2777 (3)0.4188 (2)0.52044 (17)0.0591 (5)
H8B0.28930.44570.57580.071*
C9B0.1972 (2)0.30098 (19)0.54744 (14)0.0496 (4)
H9B0.15500.24770.61980.060*
C11−0.0503 (2)0.45116 (18)0.25448 (16)0.0506 (4)
H11A−0.10840.39570.32570.076*
H11B−0.13280.49100.20680.076*
H11C0.00660.52050.26030.076*
C410.21203 (16)0.26281 (13)0.03025 (10)0.0303 (2)
C420.03314 (17)0.25080 (14)0.05212 (11)0.0338 (3)
H42−0.03240.27440.10790.041*
C43−0.04964 (18)0.20518 (15)−0.00610 (12)0.0375 (3)
H43−0.16890.19900.01010.045*
C440.04591 (19)0.16899 (14)−0.08833 (11)0.0362 (3)
C450.22301 (19)0.17398 (16)−0.11040 (12)0.0407 (3)
H450.28790.1472−0.16460.049*
C460.30248 (17)0.21960 (15)−0.05036 (11)0.0360 (3)
U11U22U33U12U13U23
Cl10.0568 (2)0.0684 (3)0.0460 (2)−0.01210 (19)−0.01697 (18)−0.02727 (19)
Cl20.02974 (17)0.0955 (4)0.0552 (2)−0.00686 (19)0.00060 (15)−0.0370 (2)
O10.0472 (6)0.0649 (8)0.0476 (6)−0.0279 (6)−0.0104 (5)−0.0039 (6)
O20.0388 (5)0.0369 (5)0.0401 (5)−0.0137 (4)−0.0071 (4)−0.0095 (4)
N10.0374 (6)0.0304 (5)0.0346 (5)0.0055 (4)−0.0123 (4)−0.0115 (4)
N1A0.0425 (6)0.0310 (5)0.0334 (6)0.0047 (4)−0.0116 (5)−0.0077 (4)
N1B0.0422 (6)0.0363 (6)0.0279 (5)−0.0105 (5)0.0006 (4)−0.0080 (4)
C1A0.0657 (11)0.0321 (7)0.0479 (9)0.0045 (7)−0.0105 (8)−0.0058 (6)
C20.0312 (5)0.0245 (5)0.0260 (5)−0.0040 (4)−0.0068 (4)−0.0068 (4)
C2A0.0387 (6)0.0298 (6)0.0299 (6)0.0005 (5)−0.0078 (5)−0.0107 (5)
C2B0.0296 (5)0.0298 (6)0.0311 (6)−0.0048 (4)−0.0041 (4)−0.0080 (5)
C30.0289 (5)0.0270 (5)0.0247 (5)−0.0039 (4)−0.0063 (4)−0.0064 (4)
C40.0345 (6)0.0319 (6)0.0251 (5)−0.0082 (5)−0.0074 (4)−0.0044 (4)
C4A0.0309 (6)0.0414 (7)0.0347 (6)−0.0059 (5)−0.0068 (5)−0.0137 (5)
C4B0.0360 (6)0.0301 (6)0.0318 (6)−0.0034 (5)−0.0085 (5)−0.0118 (5)
C50.0516 (8)0.0264 (6)0.0342 (6)−0.0011 (5)−0.0176 (6)−0.0042 (5)
C5A0.0366 (7)0.0537 (9)0.0452 (8)0.0010 (6)−0.0187 (6)−0.0171 (7)
C5B0.0356 (6)0.0377 (6)0.0318 (6)−0.0004 (5)−0.0058 (5)−0.0148 (5)
C6A0.0436 (8)0.0490 (8)0.0475 (8)0.0132 (7)−0.0194 (7)−0.0145 (7)
C6B0.0556 (9)0.0349 (7)0.0478 (8)−0.0114 (6)−0.0114 (7)−0.0154 (6)
C7B0.0708 (12)0.0480 (9)0.0728 (12)−0.0092 (8)−0.0219 (10)−0.0343 (9)
C8B0.0691 (12)0.0685 (12)0.0616 (11)−0.0013 (9)−0.0188 (9)−0.0448 (10)
C9B0.0564 (9)0.0613 (10)0.0385 (8)−0.0003 (8)−0.0084 (7)−0.0275 (7)
C110.0498 (9)0.0479 (9)0.0586 (10)0.0166 (7)−0.0174 (7)−0.0263 (8)
C410.0312 (6)0.0328 (6)0.0238 (5)−0.0038 (4)−0.0070 (4)−0.0059 (4)
C420.0313 (6)0.0396 (7)0.0306 (6)−0.0019 (5)−0.0057 (5)−0.0132 (5)
C430.0304 (6)0.0449 (7)0.0379 (7)−0.0035 (5)−0.0085 (5)−0.0149 (6)
C440.0400 (7)0.0389 (7)0.0312 (6)−0.0039 (5)−0.0127 (5)−0.0111 (5)
C450.0405 (7)0.0514 (8)0.0329 (7)−0.0016 (6)−0.0050 (5)−0.0198 (6)
C460.0284 (6)0.0461 (7)0.0313 (6)−0.0028 (5)−0.0036 (5)−0.0129 (5)
Cl1—C441.7326 (14)C4B—C5B1.3894 (19)
Cl2—C461.7402 (14)C5—H5A0.9700
O1—C4A1.2057 (18)C5—H5B0.9700
O2—C2B1.2226 (16)C5A—C6A1.514 (2)
N1—C111.4524 (19)C5A—H510.9700
N1—C51.4539 (19)C5A—H520.9700
N1—C21.4661 (16)C5B—C9B1.381 (2)
N1A—C2A1.4531 (17)C6A—H610.9700
N1A—C6A1.455 (2)C6A—H620.9700
N1A—C1A1.456 (2)C6B—C7B1.392 (2)
N1B—C2B1.3498 (17)C6B—H6B0.9300
N1B—C5B1.3966 (18)C7B—C8B1.374 (3)
N1B—H1B0.8600C7B—H7B0.9300
C1A—H70.9600C8B—C9B1.381 (3)
C1A—H80.9600C8B—H8B0.9300
C1A—H90.9600C9B—H9B0.9300
C2—C4B1.5192 (17)C11—H11A0.9600
C2—C2B1.5524 (16)C11—H11B0.9600
C2—C31.5916 (17)C11—H11C0.9600
C2A—C31.5329 (17)C41—C461.3879 (19)
C2A—H10.9700C41—C421.3995 (17)
C2A—H20.9700C42—C431.3801 (19)
C3—C4A1.5413 (17)C42—H420.9300
C3—C41.5604 (17)C43—C441.376 (2)
C4—C51.515 (2)C43—H430.9300
C4—C411.5180 (17)C44—C451.378 (2)
C4—H40.9800C45—C461.384 (2)
C4A—C5A1.507 (2)C45—H450.9300
C4B—C6B1.3811 (19)
C11—N1—C5115.62 (12)H5A—C5—H5B109.2
C11—N1—C2117.09 (12)C4A—C5A—C6A113.15 (13)
C5—N1—C2106.73 (11)C4A—C5A—H51108.9
C2A—N1A—C6A110.22 (12)C6A—C5A—H51108.9
C2A—N1A—C1A111.33 (12)C4A—C5A—H52108.9
C6A—N1A—C1A111.91 (13)C6A—C5A—H52108.9
C2B—N1B—C5B111.76 (11)H51—C5A—H52107.8
C2B—N1B—H1B124.1C9B—C5B—C4B122.56 (14)
C5B—N1B—H1B124.2C9B—C5B—N1B127.53 (14)
N1A—C1A—H7109.5C4B—C5B—N1B109.84 (12)
N1A—C1A—H8109.5N1A—C6A—C5A110.31 (12)
H7—C1A—H8109.5N1A—C6A—H61109.6
N1A—C1A—H9109.5C5A—C6A—H61109.6
H7—C1A—H9109.5N1A—C6A—H62109.6
H8—C1A—H9109.5C5A—C6A—H62109.6
N1—C2—C4B113.50 (10)H61—C6A—H62108.1
N1—C2—C2B108.33 (10)C4B—C6B—C7B118.74 (16)
C4B—C2—C2B101.02 (10)C4B—C6B—H6B120.6
N1—C2—C3102.91 (9)C7B—C6B—H6B120.6
C4B—C2—C3117.36 (10)C8B—C7B—C6B120.87 (16)
C2B—C2—C3113.80 (10)C8B—C7B—H7B119.6
N1A—C2A—C3110.54 (10)C6B—C7B—H7B119.6
N1A—C2A—H1109.5C7B—C8B—C9B121.36 (15)
C3—C2A—H1109.5C7B—C8B—H8B119.3
N1A—C2A—H2109.5C9B—C8B—H8B119.3
C3—C2A—H2109.5C8B—C9B—C5B117.24 (16)
H1—C2A—H2108.1C8B—C9B—H9B121.4
O2—C2B—N1B125.61 (12)C5B—C9B—H9B121.4
O2—C2B—C2125.83 (12)N1—C11—H11A109.5
N1B—C2B—C2108.44 (10)N1—C11—H11B109.5
C2A—C3—C4A106.08 (10)H11A—C11—H11B109.5
C2A—C3—C4112.94 (10)N1—C11—H11C109.5
C4A—C3—C4109.87 (10)H11A—C11—H11C109.5
C2A—C3—C2113.02 (10)H11B—C11—H11C109.5
C4A—C3—C2110.45 (10)C46—C41—C42115.70 (12)
C4—C3—C2104.55 (10)C46—C41—C4122.16 (12)
C5—C4—C41111.19 (11)C42—C41—C4121.86 (12)
C5—C4—C3102.12 (10)C43—C42—C41122.42 (13)
C41—C4—C3116.79 (10)C43—C42—H42118.8
C5—C4—H4108.8C41—C42—H42118.8
C41—C4—H4108.8C44—C43—C42119.36 (13)
C3—C4—H4108.8C44—C43—H43120.3
O1—C4A—C5A121.14 (13)C42—C43—H43120.3
O1—C4A—C3122.06 (13)C43—C44—C45120.56 (13)
C5A—C4A—C3116.78 (11)C43—C44—Cl1120.14 (11)
C6B—C4B—C5B119.22 (13)C45—C44—Cl1119.29 (11)
C6B—C4B—C2131.56 (13)C44—C45—C46118.75 (13)
C5B—C4B—C2108.82 (11)C44—C45—H45120.6
N1—C5—C4102.60 (10)C46—C45—H45120.6
N1—C5—H5A111.2C45—C46—C41123.11 (12)
C4—C5—H5A111.2C45—C46—Cl2115.88 (11)
N1—C5—H5B111.2C41—C46—Cl2121.01 (11)
C4—C5—H5B111.2
C11—N1—C2—C4B−36.10 (17)N1—C2—C4B—C5B115.04 (12)
C5—N1—C2—C4B95.27 (12)C2B—C2—C4B—C5B−0.69 (14)
C11—N1—C2—C2B75.23 (15)C3—C2—C4B—C5B−125.00 (12)
C5—N1—C2—C2B−153.40 (11)C11—N1—C5—C4179.57 (12)
C11—N1—C2—C3−163.97 (12)C2—N1—C5—C447.39 (13)
C5—N1—C2—C3−32.60 (12)C41—C4—C5—N184.59 (12)
C6A—N1A—C2A—C3−69.88 (14)C3—C4—C5—N1−40.70 (12)
C1A—N1A—C2A—C3165.32 (13)O1—C4A—C5A—C6A−136.43 (17)
C5B—N1B—C2B—O2−173.19 (13)C3—C4A—C5A—C6A41.83 (19)
C5B—N1B—C2B—C23.01 (16)C6B—C4B—C5B—C9B−1.3 (2)
N1—C2—C2B—O255.31 (17)C2—C4B—C5B—C9B−174.82 (14)
C4B—C2—C2B—O2174.82 (13)C6B—C4B—C5B—N1B176.05 (14)
C3—C2—C2B—O2−58.48 (17)C2—C4B—C5B—N1B2.48 (16)
N1—C2—C2B—N1B−120.88 (12)C2B—N1B—C5B—C9B173.59 (15)
C4B—C2—C2B—N1B−1.37 (13)C2B—N1B—C5B—C4B−3.54 (17)
C3—C2—C2B—N1B125.33 (11)C2A—N1A—C6A—C5A61.70 (16)
N1A—C2A—C3—C4A58.36 (13)C1A—N1A—C6A—C5A−173.83 (14)
N1A—C2A—C3—C4178.76 (10)C4A—C5A—C6A—N1A−47.18 (19)
N1A—C2A—C3—C2−62.80 (13)C5B—C4B—C6B—C7B0.6 (2)
N1—C2—C3—C2A−117.16 (11)C2—C4B—C6B—C7B172.46 (16)
C4B—C2—C3—C2A117.44 (11)C4B—C6B—C7B—C8B0.1 (3)
C2B—C2—C3—C2A−0.17 (14)C6B—C7B—C8B—C9B−0.3 (3)
N1—C2—C3—C4A124.19 (11)C7B—C8B—C9B—C5B−0.3 (3)
C4B—C2—C3—C4A−1.21 (14)C4B—C5B—C9B—C8B1.1 (3)
C2B—C2—C3—C4A−118.83 (11)N1B—C5B—C9B—C8B−175.70 (16)
N1—C2—C3—C46.05 (11)C5—C4—C41—C46142.59 (13)
C4B—C2—C3—C4−119.35 (11)C3—C4—C41—C46−100.79 (14)
C2B—C2—C3—C4123.03 (10)C5—C4—C41—C42−30.98 (16)
C2A—C3—C4—C5144.01 (11)C3—C4—C41—C4285.64 (15)
C4A—C3—C4—C5−97.78 (12)C46—C41—C42—C43−3.1 (2)
C2—C3—C4—C520.75 (12)C4—C41—C42—C43170.90 (13)
C2A—C3—C4—C4122.49 (15)C41—C42—C43—C440.5 (2)
C4A—C3—C4—C41140.71 (12)C42—C43—C44—C452.0 (2)
C2—C3—C4—C41−100.77 (12)C42—C43—C44—Cl1−177.15 (11)
C2A—C3—C4A—O1132.58 (15)C43—C44—C45—C46−1.8 (2)
C4—C3—C4A—O110.21 (19)Cl1—C44—C45—C46177.43 (11)
C2—C3—C4A—O1−104.62 (16)C44—C45—C46—C41−1.1 (2)
C2A—C3—C4A—C5A−45.66 (16)C44—C45—C46—Cl2179.75 (12)
C4—C3—C4A—C5A−168.03 (12)C42—C41—C46—C453.4 (2)
C2—C3—C4A—C5A77.15 (15)C4—C41—C46—C45−170.57 (13)
N1—C2—C4B—C6B−57.5 (2)C42—C41—C46—Cl2−177.48 (10)
C2B—C2—C4B—C6B−173.18 (16)C4—C41—C46—Cl28.58 (18)
C3—C2—C4B—C6B62.5 (2)
D—H···AD—HH···AD···AD—H···A
N1B—H1B···O2i0.862.022.8547 (15)164
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1B—H1B⋯O2i0.862.022.8547 (15)164

Symmetry code: (i) .

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