Literature DB >> 21580435

Methyl 7-chloro-2-ethyl-sulfanyl-6-fluoro-4-oxo-4H-thio-chromene-3-carboxyl-ate.

Yang Li1, Tao Xiao, Dong-Liang Liu, Guang-Yan Yu.   

Abstract

In the title compound, C(13)H(10)ClFO(3)S(2), the two-ring system is essentially planar, the mean plane of the benzene ring being inclined at 6.0 (2)° to the plane of the remaining four atoms. The ethyl-sulfanyl group is almost coplanar with the two rings [dihedral angle = 6.4 (2)°], while the carboxyl-ate group is almost perpendicular to it [dihedral angle = 72.4 (2)°]. In the crystal structure, inter-molecular C-H⋯O and C-H⋯F hydrogen bonds link the mol-ecules in a stacked arrangement along the a axis.

Entities:  

Year:  2010        PMID: 21580435      PMCID: PMC2983649          DOI: 10.1107/S1600536810002667

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related compounds containing a 4H-thio­chromen-4-one fragment, see: Adams et al. (1991 ▶); Nakazumi et al. (1992 ▶); Weiss et al. (2008 ▶). For bond-length data, see: Allen et al. (1987 ▶).

Experimental

Crystal data

C13H10ClFO3S2 M = 332.78 Triclinic, a = 7.6740 (15) Å b = 9.3880 (19) Å c = 10.368 (2) Å α = 85.18 (3)° β = 80.93 (3)° γ = 71.24 (3)° V = 698.0 (2) Å3 Z = 2 Mo Kα radiation μ = 0.59 mm−1 T = 293 K 0.20 × 0.10 × 0.10 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.892, T max = 0.944 2735 measured reflections 2531 independent reflections 1908 reflections with I > 2σ(I) R int = 0.016 3 standard reflections every 200 reflections intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.138 S = 1.00 2531 reflections 181 parameters H-atom parameters constrained Δρmax = 0.32 e Å−3 Δρmin = −0.31 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810002667/zq2029sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810002667/zq2029Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H10ClFO3S2Z = 2
Mr = 332.78F(000) = 340
Triclinic, P1Dx = 1.583 Mg m3
Hall symbol: -P 1Melting point: 421 K
a = 7.6740 (15) ÅMo Kα radiation, λ = 0.71073 Å
b = 9.3880 (19) ÅCell parameters from 25 reflections
c = 10.368 (2) Åθ = 10–13°
α = 85.18 (3)°µ = 0.59 mm1
β = 80.93 (3)°T = 293 K
γ = 71.24 (3)°Block, colourless
V = 698.0 (2) Å30.20 × 0.10 × 0.10 mm
Enraf–Nonius CAD-4 diffractometer1908 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.016
graphiteθmax = 25.3°, θmin = 2.0°
ω/2θ scansh = 0→9
Absorption correction: ψ scan (North et al., 1968)k = −10→11
Tmin = 0.892, Tmax = 0.944l = −12→12
2735 measured reflections3 standard reflections every 200 reflections
2531 independent reflections intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.138H-atom parameters constrained
S = 1.00w = 1/[σ2(Fo2) + (0.085P)2] where P = (Fo2 + 2Fc2)/3
2531 reflections(Δ/σ)max < 0.001
181 parametersΔρmax = 0.32 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl0.32919 (13)0.43804 (11)−0.25035 (9)0.0614 (3)
F−0.0661 (3)0.5608 (2)−0.2592 (2)0.0679 (6)
S10.13971 (10)0.07054 (9)0.12622 (8)0.0409 (3)
S2−0.04493 (12)−0.08554 (10)0.33572 (9)0.0515 (3)
O1−0.4369 (3)0.3010 (3)0.0513 (2)0.0541 (6)
O2−0.4884 (3)0.2281 (3)0.3453 (2)0.0572 (7)
O3−0.4571 (4)0.0067 (3)0.2676 (3)0.0738 (8)
C10.0642 (4)0.2176 (3)0.0132 (3)0.0353 (7)
C20.2053 (4)0.2628 (3)−0.0640 (3)0.0403 (7)
H2A0.32890.2153−0.05310.048*
C30.1606 (4)0.3769 (3)−0.1554 (3)0.0409 (7)
C4−0.0260 (5)0.4468 (4)−0.1690 (3)0.0460 (8)
C5−0.1641 (4)0.4052 (3)−0.0954 (3)0.0433 (8)
H5A−0.28710.4546−0.10700.052*
C6−0.1220 (4)0.2881 (3)−0.0019 (3)0.0357 (7)
C7−0.2770 (4)0.2453 (3)0.0767 (3)0.0394 (7)
C8−0.2374 (4)0.1375 (3)0.1842 (3)0.0364 (7)
C9−0.0653 (4)0.0524 (3)0.2103 (3)0.0359 (7)
C100.1994 (4)−0.1669 (4)0.3475 (3)0.0478 (8)
H10A0.2680−0.20380.26380.057*
H10B0.2482−0.09280.37500.057*
C110.2151 (5)−0.2962 (4)0.4489 (4)0.0616 (10)
H11A0.3432−0.34390.45930.092*
H11B0.1659−0.36830.42030.092*
H11C0.1459−0.25780.53100.092*
C12−0.4059 (4)0.1142 (4)0.2676 (3)0.0435 (8)
C13−0.6523 (5)0.2191 (5)0.4322 (4)0.0650 (11)
H13A−0.70100.30660.48430.097*
H13B−0.62000.13050.48820.097*
H13C−0.74450.21410.38150.097*
U11U22U33U12U13U23
Cl0.0607 (6)0.0691 (6)0.0557 (6)−0.0309 (5)0.0054 (4)0.0070 (4)
F0.0703 (15)0.0607 (13)0.0659 (13)−0.0157 (11)−0.0153 (11)0.0271 (11)
S10.0278 (4)0.0440 (5)0.0476 (5)−0.0082 (3)−0.0062 (3)0.0060 (3)
S20.0359 (5)0.0571 (6)0.0557 (5)−0.0118 (4)−0.0047 (4)0.0164 (4)
O10.0323 (12)0.0591 (15)0.0699 (16)−0.0121 (11)−0.0163 (11)0.0109 (12)
O20.0491 (14)0.0657 (16)0.0583 (15)−0.0270 (12)0.0139 (12)−0.0153 (12)
O30.0476 (15)0.0571 (16)0.119 (2)−0.0274 (13)0.0101 (15)−0.0153 (16)
C10.0362 (16)0.0339 (16)0.0375 (16)−0.0114 (13)−0.0077 (13)−0.0044 (13)
C20.0356 (16)0.0406 (17)0.0454 (18)−0.0115 (14)−0.0061 (14)−0.0058 (14)
C30.0462 (18)0.0416 (17)0.0374 (16)−0.0179 (15)−0.0024 (14)−0.0040 (14)
C40.057 (2)0.0418 (18)0.0398 (18)−0.0144 (16)−0.0116 (16)0.0019 (14)
C50.0384 (17)0.0396 (18)0.0499 (19)−0.0059 (14)−0.0125 (15)−0.0032 (15)
C60.0349 (16)0.0340 (15)0.0384 (16)−0.0088 (13)−0.0075 (13)−0.0052 (12)
C70.0306 (16)0.0392 (17)0.0467 (18)−0.0071 (13)−0.0068 (14)−0.0048 (14)
C80.0293 (15)0.0395 (16)0.0429 (17)−0.0133 (13)−0.0051 (13)−0.0050 (13)
C90.0346 (16)0.0373 (16)0.0369 (16)−0.0127 (13)−0.0044 (13)−0.0025 (13)
C100.0395 (18)0.050 (2)0.054 (2)−0.0131 (15)−0.0134 (15)0.0088 (16)
C110.054 (2)0.063 (2)0.065 (2)−0.0148 (19)−0.0194 (19)0.0168 (19)
C120.0283 (16)0.0442 (18)0.058 (2)−0.0108 (14)−0.0100 (14)0.0046 (16)
C130.049 (2)0.079 (3)0.059 (2)−0.019 (2)0.0107 (18)0.002 (2)
Cl—C31.719 (3)C5—C61.394 (4)
F—C41.352 (4)C5—H5A0.9300
S1—C91.726 (3)C6—C71.480 (4)
S1—C11.744 (3)C7—C81.441 (4)
S2—C91.744 (3)C8—C91.362 (4)
S2—C101.802 (3)C8—C121.505 (4)
O1—C71.231 (4)C10—C111.524 (4)
O2—C121.320 (4)C10—H10A0.9700
O2—C131.448 (4)C10—H10B0.9700
O3—C121.195 (4)C11—H11A0.9600
C1—C61.396 (4)C11—H11B0.9600
C1—C21.400 (4)C11—H11C0.9600
C2—C31.363 (4)C13—H13A0.9600
C2—H2A0.9300C13—H13B0.9600
C3—C41.394 (5)C13—H13C0.9600
C4—C51.349 (5)
C9—S1—C1103.12 (15)C7—C8—C12114.8 (3)
C9—S2—C10106.87 (15)C8—C9—S1124.2 (2)
C12—O2—C13116.1 (3)C8—C9—S2119.3 (2)
C6—C1—C2120.8 (3)S1—C9—S2116.45 (17)
C6—C1—S1124.0 (2)C11—C10—S2105.9 (2)
C2—C1—S1115.1 (2)C11—C10—H10A110.6
C3—C2—C1119.7 (3)S2—C10—H10A110.6
C3—C2—H2A120.2C11—C10—H10B110.6
C1—C2—H2A120.2S2—C10—H10B110.6
C2—C3—C4118.9 (3)H10A—C10—H10B108.7
C2—C3—Cl121.1 (3)C10—C11—H11A109.5
C4—C3—Cl119.9 (3)C10—C11—H11B109.5
C5—C4—F120.0 (3)H11A—C11—H11B109.5
C5—C4—C3122.4 (3)C10—C11—H11C109.5
F—C4—C3117.5 (3)H11A—C11—H11C109.5
C4—C5—C6119.8 (3)H11B—C11—H11C109.5
C4—C5—H5A120.1O3—C12—O2123.8 (3)
C6—C5—H5A120.1O3—C12—C8125.7 (3)
C5—C6—C1118.4 (3)O2—C12—C8110.4 (3)
C5—C6—C7118.3 (3)O2—C13—H13A109.5
C1—C6—C7123.3 (3)O2—C13—H13B109.5
O1—C7—C8120.6 (3)H13A—C13—H13B109.5
O1—C7—C6120.7 (3)O2—C13—H13C109.5
C8—C7—C6118.7 (3)H13A—C13—H13C109.5
C9—C8—C7125.9 (3)H13B—C13—H13C109.5
C9—C8—C12119.1 (3)
C9—S1—C1—C6−3.7 (3)C1—C6—C7—C87.3 (4)
C9—S1—C1—C2176.1 (2)O1—C7—C8—C9169.8 (3)
C6—C1—C2—C3−0.2 (4)C6—C7—C8—C9−10.5 (5)
S1—C1—C2—C3180.0 (2)O1—C7—C8—C12−6.3 (4)
C1—C2—C3—C40.5 (4)C6—C7—C8—C12173.4 (3)
C1—C2—C3—Cl178.9 (2)C7—C8—C9—S16.0 (5)
C2—C3—C4—C5−0.3 (5)C12—C8—C9—S1−178.0 (2)
Cl—C3—C4—C5−178.8 (3)C7—C8—C9—S2−173.7 (2)
C2—C3—C4—F179.2 (3)C12—C8—C9—S22.3 (4)
Cl—C3—C4—F0.7 (4)C1—S1—C9—C81.0 (3)
F—C4—C5—C6−179.6 (3)C1—S1—C9—S2−179.22 (16)
C3—C4—C5—C6−0.2 (5)C10—S2—C9—C8−176.9 (2)
C4—C5—C6—C10.5 (5)C10—S2—C9—S13.3 (2)
C4—C5—C6—C7−179.8 (3)C9—S2—C10—C11−175.0 (2)
C2—C1—C6—C5−0.3 (4)C13—O2—C12—O3−1.3 (5)
S1—C1—C6—C5179.6 (2)C13—O2—C12—C8−179.4 (3)
C2—C1—C6—C7180.0 (3)C9—C8—C12—O3−70.7 (5)
S1—C1—C6—C7−0.1 (4)C7—C8—C12—O3105.7 (4)
C5—C6—C7—O17.3 (4)C9—C8—C12—O2107.4 (3)
C1—C6—C7—O1−173.0 (3)C7—C8—C12—O2−76.2 (3)
C5—C6—C7—C8−172.4 (3)
D—H···AD—HH···AD···AD—H···A
C2—H2A···O1i0.932.603.292 (4)132
C13—H13C···Fii0.962.523.144 (5)123
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2A⋯O1i0.932.603.292 (4)132
C13—H13C⋯Fii0.962.523.144 (5)123

Symmetry codes: (i) ; (ii) .

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