Literature DB >> 21580407

3,3'-Di-tert-butyl-1,1'-[1,3-phenyl-enebis(methyl-ene)]diurea.

Musabbir A Saeed, Frank R Fronczek, Md Alamgir Hossain.   

Abstract

The title compound, C(18)H(30)N(4)O(2), contains two tert-butyl urea groups, each connected to a benzene ring though a methyl-ene group. One of the groups occupies a position almost normal to the aromatic plane with a C-N-C-C torsion angle of -94.4 (4)°, while the other is considerably twisted from the ring with a C-N-C-C torsion angle of -136.1 (4)°. In the crystal, pairs of mol-ecules are connected to each other, forming centrosymmetric dimers in which two NH groups of one mol-ecule act as hydrogen-bond donors to one carbonyl O atom of the other mol-ecule. The dimers are linked into sheets parallel to (100) by N-H⋯O hydrogen bonds involving the remaining N-H and C=O groups.

Entities:  

Year:  2010        PMID: 21580407      PMCID: PMC2983681          DOI: 10.1107/S1600536810005866

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to urea-based compounds, see: Brooks et al. (2008 ▶); Carr et al. (1998 ▶); Chauhan et al. (2008 ▶); Gomez et al. (2005 ▶); Hiscock et al. (2009 ▶); Hossain (2008 ▶); Kyne et al. (2001 ▶); Lorenzo et al. (2009 ▶); Pérez-Casas & Yatsimirsky (2008 ▶); Tejeda et al. (2000 ▶); Ghosh et al. (2007 ▶). For related structures, see: Jose et al. (2007 ▶); Lo & Ng (2008 ▶).

Experimental

Crystal data

C18H30N4O2 M = 334.46 Orthorhombic, a = 18.070 (4) Å b = 11.760 (3) Å c = 18.221 (3) Å V = 3872.0 (15) Å3 Z = 8 Mo Kα radiation μ = 0.08 mm−1 T = 90 K 0.20 × 0.10 × 0.07 mm

Data collection

Nonius KappaCCD diffractometer with an Oxford Cryosystems Cryostream cooler 43147 measured reflections 3781 independent reflections 2158 reflections with I > 2σ(I) R int = 0.081

Refinement

R[F 2 > 2σ(F 2)] = 0.081 wR(F 2) = 0.235 S = 1.03 3781 reflections 235 parameters 4 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.86 e Å−3 Δρmin = −0.31 e Å−3 Data collection: COLLECT (Nonius, 2000 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810005866/ci5033sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810005866/ci5033Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H30N4O2F(000) = 1456
Mr = 334.46Dx = 1.147 Mg m3
Orthorhombic, PbcaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2abCell parameters from 4187 reflections
a = 18.070 (4) Åθ = 2.5–26.0°
b = 11.760 (3) ŵ = 0.08 mm1
c = 18.221 (3) ÅT = 90 K
V = 3872.0 (15) Å3Plate, colourless
Z = 80.20 × 0.10 × 0.07 mm
Nonius KappaCCD diffractometer with an Oxford Cryosystems Cryostream cooler2158 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.081
graphiteθmax = 26.0°, θmin = 2.8°
ω and φ scansh = −22→22
43147 measured reflectionsk = −14→14
3781 independent reflectionsl = −22→22
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.081Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.235H atoms treated by a mixture of independent and constrained refinement
S = 1.03w = 1/[σ2(Fo2) + (0.1146P)2 + 3.4665P] where P = (Fo2 + 2Fc2)/3
3781 reflections(Δ/σ)max = 0.001
235 parametersΔρmax = 0.86 e Å3
4 restraintsΔρmin = −0.31 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.34787 (13)0.2316 (2)0.50086 (12)0.0278 (6)
O20.60321 (15)0.6965 (2)0.74637 (13)0.0341 (7)
N10.41055 (18)0.2793 (3)0.60384 (16)0.0374 (9)
H1N0.414 (2)0.267 (4)0.6479 (11)0.045*
N20.32387 (16)0.1387 (3)0.60835 (15)0.0252 (7)
H2N0.333 (2)0.138 (3)0.6520 (11)0.030*
N30.66516 (18)0.6521 (3)0.64143 (16)0.0302 (8)
H3N0.664 (2)0.664 (3)0.5948 (11)0.036*
N40.58391 (18)0.8006 (3)0.64105 (15)0.0306 (8)
H4N0.593 (2)0.798 (3)0.5976 (11)0.037*
C10.5353 (2)0.3564 (3)0.59313 (18)0.0265 (8)
C20.5746 (2)0.4512 (3)0.61638 (18)0.0284 (9)
H20.55150.52370.61600.034*
C30.6492 (2)0.4409 (3)0.64085 (18)0.0260 (8)
C40.6807 (2)0.3341 (3)0.6401 (2)0.0359 (10)
H40.73040.32540.65620.043*
C50.6429 (3)0.2405 (4)0.6169 (2)0.0472 (12)
H50.66610.16800.61650.057*
C60.5719 (2)0.2520 (4)0.5945 (2)0.0399 (10)
H60.54590.18600.57900.048*
C70.4566 (2)0.3648 (3)0.5684 (2)0.0362 (10)
H7A0.43720.44140.58010.043*
H7B0.45420.35450.51460.043*
C80.35958 (18)0.2172 (3)0.56722 (17)0.0221 (8)
C90.2612 (2)0.0693 (3)0.58226 (18)0.0303 (9)
C100.2850 (2)−0.0051 (4)0.5169 (2)0.0393 (10)
H10A0.29830.04370.47530.059*
H10B0.2440−0.05510.50270.059*
H10C0.3278−0.05130.53100.059*
C110.1961 (2)0.1455 (4)0.5611 (2)0.0376 (10)
H11A0.17920.18760.60440.056*
H11B0.15560.09860.54230.056*
H11C0.21190.19930.52310.056*
C120.2391 (3)−0.0088 (4)0.6458 (2)0.0457 (12)
H12A0.2818−0.05480.66060.069*
H12B0.1988−0.05900.63000.069*
H12C0.22250.03740.68750.069*
C130.6909 (2)0.5427 (3)0.6683 (2)0.0333 (10)
H13A0.68830.54330.72250.040*
H13B0.74350.53390.65450.040*
C140.6158 (2)0.7160 (3)0.68049 (18)0.0272 (8)
C150.5256 (2)0.8778 (3)0.66675 (18)0.0259 (8)
C160.5559 (2)0.9634 (3)0.7207 (2)0.0362 (10)
H16A0.57620.92340.76340.054*
H16B0.51611.01430.73660.054*
H16C0.59511.00790.69720.054*
C170.4608 (2)0.8133 (4)0.6996 (2)0.0417 (11)
H17A0.44160.75900.66350.063*
H17B0.42160.86710.71310.063*
H17C0.47730.77230.74350.063*
C180.4988 (3)0.9395 (4)0.5971 (2)0.0434 (11)
H18A0.54080.97710.57330.065*
H18B0.46160.99660.61050.065*
H18C0.47680.88430.56320.065*
U11U22U33U12U13U23
O10.0263 (14)0.0416 (16)0.0156 (13)−0.0042 (12)0.0019 (10)0.0011 (10)
O20.0435 (17)0.0359 (16)0.0228 (14)0.0026 (13)−0.0013 (11)0.0004 (11)
N10.038 (2)0.054 (2)0.0201 (16)−0.0192 (18)−0.0036 (14)0.0074 (15)
N20.0255 (17)0.0353 (18)0.0147 (14)−0.0036 (14)−0.0021 (12)0.0024 (13)
N30.0365 (19)0.0284 (18)0.0256 (16)0.0014 (16)0.0007 (14)0.0007 (13)
N40.042 (2)0.0358 (19)0.0139 (14)0.0110 (16)0.0045 (14)0.0045 (13)
C10.028 (2)0.030 (2)0.0214 (18)−0.0013 (18)0.0065 (15)−0.0001 (15)
C20.035 (2)0.028 (2)0.0223 (18)0.0022 (18)0.0057 (16)0.0035 (15)
C30.028 (2)0.028 (2)0.0221 (18)−0.0024 (17)0.0082 (15)0.0018 (15)
C40.039 (2)0.034 (2)0.034 (2)0.011 (2)0.0043 (18)0.0051 (17)
C50.054 (3)0.028 (2)0.059 (3)0.009 (2)0.020 (2)0.008 (2)
C60.044 (3)0.034 (2)0.042 (2)−0.001 (2)0.018 (2)0.0023 (19)
C70.034 (2)0.039 (2)0.036 (2)−0.012 (2)−0.0053 (18)0.0105 (18)
C80.0182 (18)0.030 (2)0.0179 (18)0.0015 (16)0.0030 (14)−0.0008 (14)
C90.028 (2)0.037 (2)0.0263 (19)−0.0075 (18)−0.0020 (16)0.0036 (16)
C100.043 (3)0.034 (2)0.040 (2)−0.005 (2)−0.0047 (19)−0.0060 (19)
C110.026 (2)0.050 (3)0.037 (2)−0.005 (2)−0.0007 (17)−0.0004 (19)
C120.046 (3)0.054 (3)0.037 (2)−0.021 (2)−0.004 (2)0.010 (2)
C130.032 (2)0.037 (2)0.030 (2)0.0033 (19)−0.0038 (17)0.0035 (17)
C140.031 (2)0.028 (2)0.0233 (19)0.0032 (18)0.0027 (16)−0.0022 (16)
C150.029 (2)0.026 (2)0.0231 (18)0.0052 (17)0.0016 (15)0.0005 (15)
C160.046 (3)0.031 (2)0.032 (2)−0.004 (2)0.0063 (18)−0.0001 (16)
C170.040 (3)0.047 (3)0.038 (2)−0.008 (2)0.0044 (19)−0.0069 (19)
C180.055 (3)0.043 (3)0.033 (2)0.018 (2)−0.002 (2)0.0009 (18)
O1—C81.239 (4)C7—H7B0.99
O2—C141.243 (4)C9—C111.527 (5)
N1—C81.352 (5)C9—C121.530 (5)
N1—C71.455 (5)C9—C101.539 (5)
N1—H1N0.819 (18)C10—H10A0.98
N2—C81.353 (4)C10—H10B0.98
N2—C91.475 (5)C10—H10C0.98
N2—H2N0.813 (18)C11—H11A0.98
N3—C141.367 (5)C11—H11B0.98
N3—C131.452 (5)C11—H11C0.98
N3—H3N0.860 (18)C12—H12A0.98
N4—C141.355 (5)C12—H12B0.98
N4—C151.468 (5)C12—H12C0.98
N4—H4N0.809 (18)C13—H13A0.99
C1—C21.388 (5)C13—H13B0.99
C1—C61.395 (5)C15—C161.510 (5)
C1—C71.495 (5)C15—C171.518 (5)
C2—C31.426 (5)C15—C181.540 (5)
C2—H20.95C16—H16A0.98
C3—C41.380 (5)C16—H16B0.98
C3—C131.499 (5)C16—H16C0.98
C4—C51.362 (6)C17—H17A0.98
C4—H40.95C17—H17B0.98
C5—C61.352 (6)C17—H17C0.98
C5—H50.95C18—H18A0.98
C6—H60.95C18—H18B0.98
C7—H7A0.99C18—H18C0.98
C8—N1—C7122.9 (3)C9—C10—H10C109.5
C8—N1—H1N117 (3)H10A—C10—H10C109.5
C7—N1—H1N120 (3)H10B—C10—H10C109.5
C8—N2—C9124.4 (3)C9—C11—H11A109.5
C8—N2—H2N117 (3)C9—C11—H11B109.5
C9—N2—H2N118 (3)H11A—C11—H11B109.5
C14—N3—C13121.4 (3)C9—C11—H11C109.5
C14—N3—H3N114 (3)H11A—C11—H11C109.5
C13—N3—H3N119 (3)H11B—C11—H11C109.5
C14—N4—C15126.2 (3)C9—C12—H12A109.5
C14—N4—H4N114 (3)C9—C12—H12B109.5
C15—N4—H4N119 (3)H12A—C12—H12B109.5
C2—C1—C6117.3 (4)C9—C12—H12C109.5
C2—C1—C7121.7 (3)H12A—C12—H12C109.5
C6—C1—C7121.0 (4)H12B—C12—H12C109.5
C1—C2—C3120.8 (3)N3—C13—C3115.7 (3)
C1—C2—H2119.6N3—C13—H13A108.3
C3—C2—H2119.6C3—C13—H13A108.3
C4—C3—C2117.7 (4)N3—C13—H13B108.3
C4—C3—C13121.5 (4)C3—C13—H13B108.3
C2—C3—C13120.8 (3)H13A—C13—H13B107.4
C5—C4—C3122.1 (4)O2—C14—N4124.7 (3)
C5—C4—H4119.0O2—C14—N3121.4 (3)
C3—C4—H4119.0N4—C14—N3113.9 (3)
C6—C5—C4119.3 (4)N4—C15—C16111.0 (3)
C6—C5—H5120.3N4—C15—C17111.8 (3)
C4—C5—H5120.3C16—C15—C17110.9 (3)
C5—C6—C1122.9 (4)N4—C15—C18104.7 (3)
C5—C6—H6118.6C16—C15—C18109.7 (3)
C1—C6—H6118.6C17—C15—C18108.6 (3)
N1—C7—C1111.4 (3)C15—C16—H16A109.5
N1—C7—H7A109.3C15—C16—H16B109.5
C1—C7—H7A109.3H16A—C16—H16B109.5
N1—C7—H7B109.3C15—C16—H16C109.5
C1—C7—H7B109.3H16A—C16—H16C109.5
H7A—C7—H7B108.0H16B—C16—H16C109.5
O1—C8—N1121.6 (3)C15—C17—H17A109.5
O1—C8—N2123.5 (3)C15—C17—H17B109.5
N1—C8—N2114.8 (3)H17A—C17—H17B109.5
N2—C9—C11110.3 (3)C15—C17—H17C109.5
N2—C9—C12106.8 (3)H17A—C17—H17C109.5
C11—C9—C12110.0 (3)H17B—C17—H17C109.5
N2—C9—C10110.4 (3)C15—C18—H18A109.5
C11—C9—C10110.7 (3)C15—C18—H18B109.5
C12—C9—C10108.5 (3)H18A—C18—H18B109.5
C9—C10—H10A109.5C15—C18—H18C109.5
C9—C10—H10B109.5H18A—C18—H18C109.5
H10A—C10—H10B109.5H18B—C18—H18C109.5
C6—C1—C2—C3−0.3 (5)C9—N2—C8—O1−7.1 (5)
C7—C1—C2—C3179.0 (3)C9—N2—C8—N1173.7 (3)
C1—C2—C3—C40.4 (5)C8—N2—C9—C11−61.4 (4)
C1—C2—C3—C13−178.0 (3)C8—N2—C9—C12179.0 (3)
C2—C3—C4—C50.1 (5)C8—N2—C9—C1061.2 (4)
C13—C3—C4—C5178.4 (4)C14—N3—C13—C394.4 (4)
C3—C4—C5—C6−0.6 (6)C4—C3—C13—N3157.3 (3)
C4—C5—C6—C10.7 (6)C2—C3—C13—N3−24.4 (5)
C2—C1—C6—C5−0.3 (5)C15—N4—C14—O2−4.9 (6)
C7—C1—C6—C5−179.5 (4)C15—N4—C14—N3175.7 (3)
C8—N1—C7—C1−136.1 (4)C13—N3—C14—O215.8 (6)
C2—C1—C7—N1−131.0 (4)C13—N3—C14—N4−164.8 (3)
C6—C1—C7—N148.2 (5)C14—N4—C15—C1672.8 (5)
C7—N1—C8—O1−1.7 (6)C14—N4—C15—C17−51.5 (5)
C7—N1—C8—N2177.6 (3)C14—N4—C15—C18−168.9 (4)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O2i0.82 (2)2.12 (2)2.909 (4)162 (4)
N2—H2N···O2i0.81 (2)2.28 (2)3.034 (4)153 (4)
N3—H3N···O1ii0.86 (2)2.15 (2)2.941 (4)154 (4)
N4—H4N···O1ii0.81 (2)2.12 (2)2.889 (4)160 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N⋯O2i0.82 (2)2.12 (2)2.909 (4)162 (4)
N2—H2N⋯O2i0.81 (2)2.28 (2)3.034 (4)153 (4)
N3—H3N⋯O1ii0.86 (2)2.15 (2)2.941 (4)154 (4)
N4—H4N⋯O1ii0.81 (2)2.12 (2)2.889 (4)160 (4)

Symmetry codes: (i) ; (ii) .

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