Literature DB >> 21580352

Dimethyl 1,4-dihydro-4-(4-methoxy-phen-yl)-2,6-dimethyl-pyridine-3,5-dicarboxyl-ate.

Wan-Sin Loh, Hoong-Kun Fun, B Palakshi Reddy, V Vijayakumar, S Sarveswari.   

Abstract

In the title compound, C(18)H(21)NO(5), the dihydro-pyridine ring adopts a flattened-boat conformation and its planar part forms a dihedral angle of 84.60 (2)° with the benzene ring. In the crystal, inter-molecular N-H⋯O and C-H⋯O hydrogen bonds result in the formation of zigzag layers parallel to (001). These layers are inter-connected via C-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21580352      PMCID: PMC2983583          DOI: 10.1107/S1600536810004940

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis, see: Rathore et al. (2009 ▶). For general background and applications of 1,4-dihydro­pyridine derivatives, see: Bocker & Guengerich (1986 ▶); Cooper et al. (1992 ▶); Gaudio et al. (1994 ▶); Gordeev et al. (1996 ▶); Sunkel et al. (1992 ▶); Vo et al. (1995 ▶). For ring conformations, see: Cremer & Pople (1975 ▶). For bond-length data, see: Allen et al. (1987 ▶). For related structures, see: Fun et al. (2009a ▶,b ▶). For hydrogen-bond motifs, see: Bernstein et al. (1995 ▶). For the stability of the temperature controller used for the data collection, see: Cosier & Glazer (1986 ▶).

Experimental

Crystal data

C18H21NO5 M = 331.36 Triclinic, a = 7.4106 (3) Å b = 9.5715 (5) Å c = 11.7771 (6) Å α = 83.029 (1)° β = 83.834 (1)° γ = 77.424 (1)° V = 806.46 (7) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 100 K 0.35 × 0.34 × 0.24 mm

Data collection

Bruker SMART APEX DUO CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.966, T max = 0.976 19600 measured reflections 4664 independent reflections 4319 reflections with I > 2σ(I) R int = 0.019

Refinement

R[F 2 > 2σ(F 2)] = 0.037 wR(F 2) = 0.110 S = 1.05 4664 reflections 226 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.48 e Å−3 Δρmin = −0.22 e Å−3 Data collection: APEX DUO (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL and PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810004940/ci5029sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810004940/ci5029Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H21NO5Z = 2
Mr = 331.36F(000) = 352
Triclinic, P1Dx = 1.365 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.4106 (3) ÅCell parameters from 9874 reflections
b = 9.5715 (5) Åθ = 2.8–37.5°
c = 11.7771 (6) ŵ = 0.10 mm1
α = 83.029 (1)°T = 100 K
β = 83.834 (1)°Block, colourless
γ = 77.424 (1)°0.35 × 0.34 × 0.24 mm
V = 806.46 (7) Å3
Bruker SMART APEX DUO CCD area-detector diffractometer4664 independent reflections
Radiation source: fine-focus sealed tube4319 reflections with I > 2σ(I)
graphiteRint = 0.019
φ and ω scansθmax = 30.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −10→10
Tmin = 0.966, Tmax = 0.976k = −13→13
19600 measured reflectionsl = −15→16
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.037Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.110H atoms treated by a mixture of independent and constrained refinement
S = 1.05w = 1/[σ2(Fo2) + (0.0628P)2 + 0.2437P] where P = (Fo2 + 2Fc2)/3
4664 reflections(Δ/σ)max = 0.001
226 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.22 e Å3
Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K.
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.19666 (9)0.64176 (7)0.02070 (6)0.01872 (14)
O20.45751 (9)−0.03547 (8)0.19907 (6)0.02053 (15)
O30.76827 (9)−0.08374 (7)0.16829 (6)0.01754 (14)
O40.13686 (9)0.26414 (7)0.49736 (6)0.01760 (14)
O50.29405 (9)0.35204 (8)0.61485 (6)0.01934 (14)
N10.78947 (10)0.17746 (8)0.42720 (6)0.01437 (14)
C10.22940 (12)0.30263 (9)0.19929 (7)0.01528 (16)
H1A0.16360.22910.21320.018*
C20.17064 (12)0.41859 (9)0.11955 (7)0.01588 (16)
H2A0.06670.42210.08060.019*
C30.26760 (11)0.52967 (9)0.09799 (7)0.01404 (16)
C40.42555 (12)0.52171 (9)0.15453 (8)0.01685 (17)
H4A0.49300.59420.13930.020*
C50.48191 (12)0.40434 (9)0.23414 (8)0.01621 (17)
H5A0.58750.39970.27180.019*
C60.38473 (11)0.29392 (9)0.25892 (7)0.01226 (15)
C70.44663 (11)0.16962 (9)0.34963 (7)0.01211 (15)
H7A0.35130.11140.36310.015*
C80.62773 (11)0.07428 (8)0.30836 (7)0.01266 (15)
C90.79129 (11)0.08547 (9)0.34450 (7)0.01310 (15)
C100.63106 (11)0.23953 (9)0.49133 (7)0.01351 (15)
C110.46306 (11)0.22785 (9)0.46145 (7)0.01275 (15)
C120.28140 (14)0.76387 (10)0.00644 (9)0.02215 (19)
H12A0.21510.8376−0.04550.033*
H12B0.40790.7363−0.02430.033*
H12C0.27820.79980.07940.033*
C130.60706 (12)−0.01947 (9)0.22266 (7)0.01414 (16)
C140.74903 (14)−0.16612 (11)0.07708 (9)0.02279 (19)
H14A0.8698−0.20910.04440.034*
H14B0.6814−0.10380.01880.034*
H14C0.6831−0.24030.10730.034*
C150.28484 (11)0.28084 (9)0.52454 (7)0.01380 (16)
C160.11938 (13)0.41561 (11)0.67270 (8)0.02036 (18)
H16A0.14160.46590.73380.031*
H16B0.05400.34140.70370.031*
H16C0.04620.48190.61910.031*
C170.98251 (11)0.00466 (9)0.30817 (8)0.01614 (16)
H17A0.9862−0.09690.32060.024*
H17B1.07120.02810.35260.024*
H17C1.01220.03120.22820.024*
C180.67039 (12)0.31346 (10)0.58865 (8)0.01716 (17)
H18A0.59850.41010.58480.026*
H18B0.80000.31560.58300.026*
H18C0.63790.26190.66040.026*
H1N10.895 (2)0.1892 (17)0.4467 (13)0.030 (4)*
U11U22U33U12U13U23
O10.0186 (3)0.0164 (3)0.0206 (3)−0.0040 (2)−0.0063 (2)0.0048 (2)
O20.0147 (3)0.0233 (3)0.0262 (3)−0.0051 (2)−0.0037 (2)−0.0088 (3)
O30.0143 (3)0.0177 (3)0.0218 (3)−0.0029 (2)−0.0008 (2)−0.0080 (2)
O40.0111 (3)0.0237 (3)0.0187 (3)−0.0042 (2)−0.0016 (2)−0.0036 (2)
O50.0127 (3)0.0272 (3)0.0193 (3)−0.0035 (2)0.0003 (2)−0.0099 (3)
N10.0095 (3)0.0180 (3)0.0168 (3)−0.0037 (2)−0.0026 (2)−0.0036 (3)
C10.0140 (4)0.0160 (4)0.0171 (4)−0.0055 (3)−0.0041 (3)0.0002 (3)
C20.0139 (4)0.0177 (4)0.0168 (4)−0.0039 (3)−0.0055 (3)0.0001 (3)
C30.0140 (3)0.0141 (3)0.0131 (3)−0.0013 (3)−0.0014 (3)−0.0005 (3)
C40.0166 (4)0.0161 (4)0.0192 (4)−0.0068 (3)−0.0043 (3)0.0015 (3)
C50.0140 (4)0.0178 (4)0.0182 (4)−0.0056 (3)−0.0057 (3)0.0009 (3)
C60.0111 (3)0.0132 (3)0.0125 (3)−0.0021 (3)−0.0014 (3)−0.0017 (3)
C70.0098 (3)0.0135 (3)0.0133 (3)−0.0027 (3)−0.0021 (3)−0.0010 (3)
C80.0117 (3)0.0119 (3)0.0144 (3)−0.0025 (3)−0.0016 (3)−0.0010 (3)
C90.0120 (3)0.0126 (3)0.0146 (3)−0.0029 (3)−0.0010 (3)−0.0003 (3)
C100.0124 (4)0.0148 (3)0.0134 (3)−0.0028 (3)−0.0021 (3)−0.0006 (3)
C110.0109 (3)0.0146 (3)0.0128 (3)−0.0028 (3)−0.0012 (3)−0.0010 (3)
C120.0258 (5)0.0168 (4)0.0238 (4)−0.0066 (3)−0.0043 (3)0.0043 (3)
C130.0141 (4)0.0123 (3)0.0161 (4)−0.0030 (3)−0.0017 (3)−0.0006 (3)
C140.0205 (4)0.0232 (4)0.0270 (5)−0.0042 (3)−0.0016 (3)−0.0131 (4)
C150.0131 (3)0.0148 (3)0.0132 (3)−0.0028 (3)−0.0013 (3)0.0000 (3)
C160.0149 (4)0.0243 (4)0.0218 (4)−0.0022 (3)0.0021 (3)−0.0087 (3)
C170.0101 (3)0.0161 (4)0.0223 (4)−0.0023 (3)−0.0014 (3)−0.0030 (3)
C180.0132 (4)0.0221 (4)0.0178 (4)−0.0038 (3)−0.0037 (3)−0.0059 (3)
O1—C31.3697 (10)C7—C81.5180 (11)
O1—C121.4276 (11)C7—H7A0.98
O2—C131.2163 (10)C8—C91.3565 (11)
O3—C131.3516 (10)C8—C131.4698 (11)
O3—C141.4433 (11)C9—C171.5040 (11)
O4—C151.2226 (10)C10—C111.3603 (11)
O5—C151.3461 (10)C10—C181.5026 (11)
O5—C161.4416 (11)C11—C151.4637 (11)
N1—C101.3843 (10)C12—H12A0.96
N1—C91.3872 (11)C12—H12B0.96
N1—H1N10.871 (16)C12—H12C0.96
C1—C21.3885 (11)C14—H14A0.96
C1—C61.3938 (11)C14—H14B0.96
C1—H1A0.93C14—H14C0.96
C2—C31.3925 (12)C16—H16A0.96
C2—H2A0.93C16—H16B0.96
C3—C41.3912 (12)C16—H16C0.96
C4—C51.3928 (11)C17—H17A0.96
C4—H4A0.93C17—H17B0.96
C5—C61.3901 (11)C17—H17C0.96
C5—H5A0.93C18—H18A0.96
C6—C71.5252 (11)C18—H18B0.96
C7—C111.5172 (11)C18—H18C0.96
C3—O1—C12116.97 (7)C10—C11—C15124.91 (8)
C13—O3—C14115.18 (7)C10—C11—C7120.70 (7)
C15—O5—C16116.31 (7)C15—C11—C7114.13 (7)
C10—N1—C9124.03 (7)O1—C12—H12A109.5
C10—N1—H1N1116.8 (10)O1—C12—H12B109.5
C9—N1—H1N1118.7 (10)H12A—C12—H12B109.5
C2—C1—C6121.53 (8)O1—C12—H12C109.5
C2—C1—H1A119.2H12A—C12—H12C109.5
C6—C1—H1A119.2H12B—C12—H12C109.5
C1—C2—C3119.85 (8)O2—C13—O3121.96 (8)
C1—C2—H2A120.1O2—C13—C8123.36 (8)
C3—C2—H2A120.1O3—C13—C8114.65 (7)
O1—C3—C4124.45 (8)O3—C14—H14A109.5
O1—C3—C2115.92 (7)O3—C14—H14B109.5
C4—C3—C2119.63 (8)H14A—C14—H14B109.5
C3—C4—C5119.49 (8)O3—C14—H14C109.5
C3—C4—H4A120.3H14A—C14—H14C109.5
C5—C4—H4A120.3H14B—C14—H14C109.5
C6—C5—C4121.82 (8)O4—C15—O5121.67 (8)
C6—C5—H5A119.1O4—C15—C11123.13 (8)
C4—C5—H5A119.1O5—C15—C11115.20 (7)
C5—C6—C1117.64 (7)O5—C16—H16A109.5
C5—C6—C7120.39 (7)O5—C16—H16B109.5
C1—C6—C7121.96 (7)H16A—C16—H16B109.5
C11—C7—C8111.44 (6)O5—C16—H16C109.5
C11—C7—C6109.82 (6)H16A—C16—H16C109.5
C8—C7—C6110.88 (6)H16B—C16—H16C109.5
C11—C7—H7A108.2C9—C17—H17A109.5
C8—C7—H7A108.2C9—C17—H17B109.5
C6—C7—H7A108.2H17A—C17—H17B109.5
C9—C8—C13125.21 (7)C9—C17—H17C109.5
C9—C8—C7120.89 (7)H17A—C17—H17C109.5
C13—C8—C7113.77 (7)H17B—C17—H17C109.5
C8—C9—N1118.88 (7)C10—C18—H18A109.5
C8—C9—C17127.61 (8)C10—C18—H18B109.5
N1—C9—C17113.47 (7)H18A—C18—H18B109.5
C11—C10—N1118.71 (7)C10—C18—H18C109.5
C11—C10—C18127.85 (8)H18A—C18—H18C109.5
N1—C10—C18113.43 (7)H18B—C18—H18C109.5
C6—C1—C2—C3−0.14 (13)C10—N1—C9—C812.37 (12)
C12—O1—C3—C4−6.29 (13)C10—N1—C9—C17−165.74 (7)
C12—O1—C3—C2173.39 (8)C9—N1—C10—C11−10.00 (12)
C1—C2—C3—O1−178.08 (8)C9—N1—C10—C18169.89 (7)
C1—C2—C3—C41.62 (13)N1—C10—C11—C15176.50 (7)
O1—C3—C4—C5178.06 (8)C18—C10—C11—C15−3.38 (14)
C2—C3—C4—C5−1.60 (13)N1—C10—C11—C7−9.74 (12)
C3—C4—C5—C60.12 (14)C18—C10—C11—C7170.39 (8)
C4—C5—C6—C11.32 (13)C8—C7—C11—C1024.10 (10)
C4—C5—C6—C7−177.87 (8)C6—C7—C11—C10−99.17 (9)
C2—C1—C6—C5−1.31 (13)C8—C7—C11—C15−161.50 (7)
C2—C1—C6—C7177.87 (8)C6—C7—C11—C1575.23 (8)
C5—C6—C7—C1153.55 (10)C14—O3—C13—O22.95 (12)
C1—C6—C7—C11−125.60 (8)C14—O3—C13—C8−174.88 (7)
C5—C6—C7—C8−70.05 (10)C9—C8—C13—O2173.87 (8)
C1—C6—C7—C8110.80 (9)C7—C8—C13—O2−10.26 (12)
C11—C7—C8—C9−21.76 (10)C9—C8—C13—O3−8.34 (12)
C6—C7—C8—C9100.90 (9)C7—C8—C13—O3167.53 (7)
C11—C7—C8—C13162.17 (7)C16—O5—C15—O4−4.05 (12)
C6—C7—C8—C13−75.16 (8)C16—O5—C15—C11175.05 (7)
C13—C8—C9—N1−179.23 (7)C10—C11—C15—O4−177.44 (8)
C7—C8—C9—N15.17 (12)C7—C11—C15—O48.43 (11)
C13—C8—C9—C17−1.42 (14)C10—C11—C15—O53.48 (12)
C7—C8—C9—C17−177.01 (8)C7—C11—C15—O5−170.65 (7)
Cg1 is the centroid of the C1–C6 ring.
D—H···AD—HH···AD···AD—H···A
N1—H1N1···O4i0.87 (2)2.23 (2)3.0906 (10)169 (1)
C14—H14A···O1ii0.962.543.4631 (13)162
C18—H18B···O4i0.962.563.4558 (12)156
C12—H12B···Cg1iii0.962.793.6549 (11)151
Table 1

Hydrogen-bond geometry (Å, °)

Cg1 is the centroid of the C1–C6 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1N1⋯O4i0.87 (2)2.23 (2)3.0906 (10)169 (1)
C14—H14A⋯O1ii0.962.543.4631 (13)162
C18—H18B⋯O4i0.962.563.4558 (12)156
C12—H12BCg1iii0.962.793.6549 (11)151

Symmetry codes: (i) ; (ii) ; (iii) .

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