Literature DB >> 21580332

3-(4-Fluoro-phenyl-sulfin-yl)-2-methyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title compound, C(15)H(11)FO(2)S, the O atom and the 4-fluoro-phenyl group of the 4-fluoro-phenyl-sulfinyl substituent lie on opposite sides of the plane of the benzofuran fragment; the 4-fluoro-phenyl ring is almost perpendicular to this plane [dihedral angle = 89.59 (5)°]. Inter-molecular C-H⋯F and C-H⋯O hydrogen bonds link the mol-ecules together in the crystal structure.

Entities:  

Year:  2010        PMID: 21580332      PMCID: PMC2983520          DOI: 10.1107/S1600536810004411

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 2-methyl-3-phenyl­sulfinyl-1-benzofuran derivatives, see: Choi et al. (2008 ▶). For the pharmacological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶).

Experimental

Crystal data

C15H11FO2S M = 274.30 Orthorhombic, a = 14.992 (1) Å b = 10.4661 (8) Å c = 16.008 (1) Å V = 2511.8 (3) Å3 Z = 8 Mo Kα radiation μ = 0.26 mm−1 T = 173 K 0.50 × 0.50 × 0.25 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.880, T max = 0.937 14681 measured reflections 2878 independent reflections 2315 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.101 S = 1.10 2878 reflections 173 parameters H-atom parameters constrained Δρmax = 0.29 e Å−3 Δρmin = −0.32 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I. DOI: 10.1107/S1600536810004411/bg2329sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810004411/bg2329Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H11FO2SF(000) = 1136
Mr = 274.30Dx = 1.451 Mg m3
Orthorhombic, PbcnMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2n 2abCell parameters from 6779 reflections
a = 14.992 (1) Åθ = 2.4–27.5°
b = 10.4661 (8) ŵ = 0.26 mm1
c = 16.008 (1) ÅT = 173 K
V = 2511.8 (3) Å3Block, colourless
Z = 80.50 × 0.50 × 0.25 mm
Bruker SMART APEXII CCD diffractometer2878 independent reflections
Radiation source: Rotating Anode2315 reflections with I > 2σ(I)
Bruker HELIOS graded multilayer opticsRint = 0.026
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 2.4°
φ and ω scansh = −18→19
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −13→13
Tmin = 0.880, Tmax = 0.937l = −15→20
14681 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.035Hydrogen site location: difference Fourier map
wR(F2) = 0.101H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0443P)2 + 1.1695P] where P = (Fo2 + 2Fc2)/3
2878 reflections(Δ/σ)max < 0.001
173 parametersΔρmax = 0.29 e Å3
0 restraintsΔρmin = −0.31 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.65767 (3)0.58401 (4)0.06490 (3)0.03017 (13)
F0.44627 (8)0.14149 (11)0.17017 (8)0.0492 (3)
O10.59892 (8)0.88631 (11)0.19868 (8)0.0342 (3)
O20.75317 (9)0.54319 (13)0.06877 (8)0.0394 (3)
C10.63870 (11)0.69730 (16)0.14353 (10)0.0276 (3)
C20.66131 (10)0.69382 (15)0.23170 (10)0.0265 (3)
C30.70180 (11)0.60712 (17)0.28570 (11)0.0310 (4)
H30.72120.52780.26680.037*
C40.71236 (12)0.64306 (18)0.36876 (11)0.0352 (4)
H40.73840.58620.40620.042*
C50.68456 (13)0.76314 (19)0.39714 (11)0.0374 (4)
H50.69260.78440.45310.045*
C60.64547 (12)0.85086 (18)0.34404 (11)0.0362 (4)
H60.62720.93100.36250.043*
C70.63504 (11)0.81283 (16)0.26195 (11)0.0299 (4)
C80.60331 (11)0.81418 (16)0.12734 (11)0.0306 (4)
C90.57041 (13)0.87542 (19)0.04971 (12)0.0399 (4)
H9A0.58080.81950.00320.060*
H9B0.60150.95450.04100.060*
H9C0.50760.89190.05470.060*
C100.59373 (11)0.45389 (15)0.10668 (10)0.0274 (3)
C110.63578 (12)0.33736 (17)0.11793 (11)0.0316 (4)
H110.69710.33040.11020.038*
C120.58623 (13)0.23096 (17)0.14081 (11)0.0360 (4)
H120.61340.15210.14930.043*
C130.49582 (12)0.24576 (16)0.15059 (11)0.0341 (4)
C140.45240 (12)0.36075 (18)0.14095 (11)0.0359 (4)
H140.39120.36710.14940.043*
C150.50226 (12)0.46665 (16)0.11837 (11)0.0329 (4)
H150.47480.54560.11110.040*
U11U22U33U12U13U23
S0.0341 (2)0.0313 (2)0.0251 (2)−0.00272 (17)−0.00071 (16)−0.00052 (16)
F0.0562 (7)0.0355 (6)0.0558 (7)−0.0171 (5)−0.0002 (6)0.0001 (5)
O10.0408 (7)0.0264 (6)0.0354 (6)0.0025 (5)−0.0010 (5)0.0017 (5)
O20.0311 (6)0.0435 (7)0.0437 (7)−0.0024 (5)0.0071 (6)−0.0052 (6)
C10.0280 (8)0.0273 (8)0.0276 (8)−0.0023 (6)−0.0021 (6)0.0010 (6)
C20.0253 (8)0.0270 (8)0.0273 (8)−0.0037 (6)0.0007 (6)0.0000 (6)
C30.0317 (9)0.0301 (8)0.0311 (9)0.0002 (7)−0.0003 (7)0.0017 (7)
C40.0347 (9)0.0397 (10)0.0312 (9)−0.0023 (7)−0.0049 (7)0.0057 (7)
C50.0409 (10)0.0442 (10)0.0270 (9)−0.0082 (8)−0.0001 (8)−0.0041 (8)
C60.0422 (10)0.0307 (9)0.0357 (9)−0.0039 (7)0.0052 (8)−0.0053 (7)
C70.0310 (9)0.0266 (8)0.0320 (9)−0.0026 (6)0.0005 (7)0.0024 (7)
C80.0287 (8)0.0294 (8)0.0337 (9)−0.0033 (7)−0.0028 (7)0.0019 (7)
C90.0414 (10)0.0371 (10)0.0412 (10)0.0005 (8)−0.0091 (8)0.0097 (8)
C100.0311 (8)0.0274 (8)0.0236 (8)−0.0021 (6)−0.0033 (6)−0.0037 (6)
C110.0306 (9)0.0320 (9)0.0324 (9)0.0038 (7)−0.0009 (7)−0.0045 (7)
C120.0453 (10)0.0265 (8)0.0364 (9)0.0037 (7)−0.0036 (8)−0.0042 (7)
C130.0422 (10)0.0287 (8)0.0314 (9)−0.0099 (7)−0.0028 (7)−0.0040 (7)
C140.0276 (8)0.0398 (10)0.0402 (10)−0.0024 (7)−0.0023 (7)−0.0042 (8)
C150.0304 (8)0.0291 (9)0.0393 (9)0.0028 (7)−0.0049 (7)−0.0010 (7)
S—O21.4953 (14)C6—C71.382 (2)
S—C11.7525 (17)C6—H60.9300
S—C101.7948 (17)C8—C91.483 (2)
F—C131.357 (2)C9—H9A0.9600
O1—C81.371 (2)C9—H9B0.9600
O1—C71.382 (2)C9—H9C0.9600
C1—C81.358 (2)C10—C111.385 (2)
C1—C21.452 (2)C10—C151.390 (2)
C2—C31.393 (2)C11—C121.388 (3)
C2—C71.393 (2)C11—H110.9300
C3—C41.391 (2)C12—C131.373 (3)
C3—H30.9300C12—H120.9300
C4—C51.400 (3)C13—C141.377 (3)
C4—H40.9300C14—C151.385 (3)
C5—C61.382 (3)C14—H140.9300
C5—H50.9300C15—H150.9300
O2—S—C1108.60 (8)C1—C8—C9132.78 (17)
O2—S—C10106.21 (8)O1—C8—C9116.38 (15)
C1—S—C1099.15 (8)C8—C9—H9A109.5
C8—O1—C7106.58 (13)C8—C9—H9B109.5
C8—C1—C2107.42 (15)H9A—C9—H9B109.5
C8—C1—S122.38 (13)C8—C9—H9C109.5
C2—C1—S130.04 (13)H9A—C9—H9C109.5
C3—C2—C7119.34 (15)H9B—C9—H9C109.5
C3—C2—C1136.18 (16)C11—C10—C15121.07 (16)
C7—C2—C1104.45 (14)C11—C10—S118.27 (13)
C4—C3—C2117.83 (16)C15—C10—S120.27 (13)
C4—C3—H3121.1C10—C11—C12119.83 (16)
C2—C3—H3121.1C10—C11—H11120.1
C3—C4—C5121.28 (17)C12—C11—H11120.1
C3—C4—H4119.4C13—C12—C11117.90 (16)
C5—C4—H4119.4C13—C12—H12121.1
C6—C5—C4121.55 (17)C11—C12—H12121.1
C6—C5—H5119.2F—C13—C12118.42 (16)
C4—C5—H5119.2F—C13—C14118.04 (16)
C5—C6—C7116.21 (17)C12—C13—C14123.54 (16)
C5—C6—H6121.9C13—C14—C15118.26 (16)
C7—C6—H6121.9C13—C14—H14120.9
C6—C7—O1125.51 (16)C15—C14—H14120.9
C6—C7—C2123.78 (16)C14—C15—C10119.38 (16)
O1—C7—C2110.70 (14)C14—C15—H15120.3
C1—C8—O1110.84 (15)C10—C15—H15120.3
O2—S—C1—C8125.82 (15)C2—C1—C8—O1−1.56 (19)
C10—S—C1—C8−123.54 (15)S—C1—C8—O1−177.39 (11)
O2—S—C1—C2−48.99 (17)C2—C1—C8—C9178.10 (18)
C10—S—C1—C261.65 (16)S—C1—C8—C92.3 (3)
C8—C1—C2—C3−176.81 (19)C7—O1—C8—C11.47 (18)
S—C1—C2—C3−1.4 (3)C7—O1—C8—C9−178.25 (15)
C8—C1—C2—C71.00 (18)O2—S—C10—C11−12.66 (15)
S—C1—C2—C7176.41 (13)C1—S—C10—C11−125.19 (13)
C7—C2—C3—C41.4 (2)O2—S—C10—C15174.41 (13)
C1—C2—C3—C4178.99 (18)C1—S—C10—C1561.88 (15)
C2—C3—C4—C5−1.0 (3)C15—C10—C11—C120.3 (3)
C3—C4—C5—C60.1 (3)S—C10—C11—C12−172.52 (13)
C4—C5—C6—C70.4 (3)C10—C11—C12—C130.7 (3)
C5—C6—C7—O1−178.95 (16)C11—C12—C13—F177.80 (15)
C5—C6—C7—C20.1 (3)C11—C12—C13—C14−1.7 (3)
C8—O1—C7—C6178.34 (17)F—C13—C14—C15−177.99 (15)
C8—O1—C7—C2−0.79 (18)C12—C13—C14—C151.5 (3)
C3—C2—C7—C6−1.0 (3)C13—C14—C15—C10−0.3 (3)
C1—C2—C7—C6−179.27 (16)C11—C10—C15—C14−0.6 (3)
C3—C2—C7—O1178.14 (14)S—C10—C15—C14172.18 (13)
C1—C2—C7—O1−0.12 (18)
D—H···AD—HH···AD···AD—H···A
C6—H6···Fi0.932.523.346 (2)148
C9—H9B···O2ii0.962.413.189 (2)138
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯Fi0.932.523.346 (2)148
C9—H9B⋯O2ii0.962.413.189 (2)138

Symmetry codes: (i) ; (ii) .

  8 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  2,5,7-Trimethyl-3-phenyl-sulfinyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

7.  2,4,6-Trimethyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-12

8.  2-Methyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-12
  8 in total
  2 in total

1.  5-Bromo-3-(4-fluoro-phenyl-sulfin-yl)-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-08

2.  3-(4-Fluoro-phenyl-sulfin-yl)-5-iodo-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30
  2 in total

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