Literature DB >> 21580328

(E)-2-Acetyl-4-[(3-methyl-phenyl-)diazen-yl]phenol: an X-ray and DFT study.

Serap Yazıcı, Ciğdem Albayrak, Ismail Gümrükçüoğlu, Ismet Senel, Orhan Büyükgüngör.   

Abstract

The title compound, C(15)H(14)N(2)O(2), an azo dye, displays a trans configuration with respect to the N=N bridge. The dihedral angle between the aromatic rings is 0.18 (14)°. There is a strong intra-molecular O-H⋯O hydrogen bond. Geometrical parameters, determined using X-ray diffraction techniques, are compared with those calculated by density functional theory (DFT), using hybrid exchange-correlation functional, B3LYP and semi-empirical (PM3) methods.

Entities:  

Year:  2010        PMID: 21580328      PMCID: PMC2983497          DOI: 10.1107/S1600536810003491

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to azo compounds, see: Klaus (2003 ▶); Catino & Farris (1985 ▶); Zollinger (2003 ▶); Bahatti & Seshadri (2004 ▶); Taniike et al. (1996 ▶); Fadda et al. (1994 ▶). For a related structure, see: El-Ghamry et al. (2008 ▶). For background to DFT calculations, see: Becke (1988 ▶, 1993 ▶); Lee et al. (1988 ▶); Schmidt & Polik (2007 ▶)

Experimental

Crystal data

C15H14N2O2 M = 254.28 Monoclinic, a = 8.6917 (3) Å b = 10.9728 (3) Å c = 14.6150 (5) Å β = 112.881 (3)° V = 1284.19 (7) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 150 K 0.67 × 0.37 × 0.21 mm

Data collection

Stoe IPDS II diffractometer Absorption correction: integration (X-RED32; Stoe & Cie, 2002 ▶) T min = 0.957, T max = 0.986 16525 measured reflections 2519 independent reflections 2034 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.060 wR(F 2) = 0.175 S = 1.06 2519 reflections 176 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.48 e Å−3 Δρmin = −0.26 e Å−3 Data collection: X-AREA (Stoe & Cie, 2002 ▶); cell refinement: X-AREA; data reduction: X-RED32 (Stoe & Cie, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶) and GAUSSIAN (Frisch et al., 2004 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810003491/bt5181sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810003491/bt5181Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C15H14N2O2F(000) = 536
Mr = 254.28Dx = 1.315 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 20945 reflections
a = 8.6917 (3) Åθ = 1.9–28.0°
b = 10.9728 (3) ŵ = 0.09 mm1
c = 14.6150 (5) ÅT = 150 K
β = 112.881 (3)°Prism, brown
V = 1284.19 (7) Å30.67 × 0.37 × 0.21 mm
Z = 4
Stoe IPDS II diffractometer2519 independent reflections
Radiation source: fine-focus sealed tube2034 reflections with I > 2σ(I)
graphiteRint = 0.040
Detector resolution: 6.67 pixels mm-1θmax = 26.0°, θmin = 2.4°
ω scanh = −10→10
Absorption correction: integration (X-RED32; Stoe & Cie, 2002)k = −13→13
Tmin = 0.957, Tmax = 0.986l = −18→18
16525 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.060Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.175H atoms treated by a mixture of independent and constrained refinement
S = 1.06w = 1/[σ2(Fo2) + (0.0859P)2 + 0.7485P] where P = (Fo2 + 2Fc2)/3
2519 reflections(Δ/σ)max < 0.001
176 parametersΔρmax = 0.48 e Å3
0 restraintsΔρmin = −0.26 e Å3
Experimental. 330 frames, detector distance = 80 mm
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.7697 (3)0.49666 (19)0.56898 (15)0.0354 (5)
C20.7798 (2)0.48461 (19)0.66522 (14)0.0337 (5)
H20.71880.53710.68820.040*
C30.8796 (3)0.39527 (19)0.72861 (15)0.0340 (5)
C40.9690 (3)0.3160 (2)0.69197 (16)0.0385 (5)
C50.9567 (3)0.3271 (2)0.59383 (17)0.0433 (5)
H51.01500.27370.56950.052*
C60.8588 (3)0.4165 (2)0.53369 (15)0.0410 (5)
H60.85170.42400.46880.049*
C70.8963 (3)0.3858 (2)0.83278 (16)0.0396 (5)
C80.8087 (3)0.4746 (3)0.87272 (17)0.0506 (6)
H8A0.83230.45600.94100.076*
H8B0.69050.46950.83500.076*
H8C0.84670.55560.86790.076*
C90.5627 (3)0.7083 (2)0.37340 (17)0.0392 (5)
C100.5540 (3)0.7208 (2)0.27821 (17)0.0460 (6)
H100.61460.66920.25430.055*
C110.4544 (3)0.8107 (2)0.21837 (18)0.0482 (6)
H110.44650.81970.15340.058*
C120.3654 (3)0.8882 (2)0.25587 (17)0.0447 (6)
H120.29700.94790.21480.054*
C130.3764 (3)0.8785 (2)0.35255 (17)0.0426 (5)
C140.4774 (3)0.7866 (2)0.41242 (16)0.0426 (5)
H140.48750.77780.47780.051*
C150.2821 (3)0.9642 (3)0.39089 (19)0.0546 (7)
H15A0.30370.94480.45880.082*
H15B0.16470.95660.35170.082*
H15C0.31711.04630.38680.082*
N10.6655 (2)0.60844 (18)0.42943 (14)0.0435 (5)
N20.6666 (2)0.59649 (18)0.51418 (13)0.0431 (5)
O11.0685 (2)0.22765 (17)0.74768 (14)0.0523 (5)
O20.9858 (2)0.30620 (17)0.88764 (12)0.0522 (5)
H11.055 (4)0.235 (3)0.801 (3)0.076 (11)*
U11U22U33U12U13U23
C10.0362 (10)0.0347 (11)0.0302 (10)−0.0037 (8)0.0074 (8)0.0012 (8)
C20.0342 (10)0.0327 (10)0.0320 (10)−0.0026 (8)0.0106 (8)−0.0006 (8)
C30.0347 (10)0.0348 (11)0.0299 (10)−0.0039 (8)0.0098 (8)0.0018 (8)
C40.0386 (11)0.0354 (11)0.0376 (11)0.0018 (9)0.0104 (9)0.0055 (9)
C50.0475 (13)0.0427 (13)0.0401 (12)0.0041 (10)0.0174 (10)−0.0026 (10)
C60.0460 (12)0.0458 (13)0.0286 (10)−0.0039 (10)0.0118 (9)0.0002 (9)
C70.0359 (11)0.0473 (13)0.0320 (10)−0.0061 (10)0.0091 (9)0.0061 (9)
C80.0533 (14)0.0671 (16)0.0326 (11)0.0004 (12)0.0181 (10)0.0003 (11)
C90.0378 (11)0.0343 (11)0.0432 (11)−0.0041 (9)0.0133 (9)0.0002 (9)
C100.0511 (13)0.0437 (13)0.0426 (12)−0.0030 (11)0.0177 (11)−0.0016 (10)
C110.0524 (14)0.0438 (13)0.0435 (12)−0.0035 (11)0.0133 (11)0.0023 (10)
C120.0467 (12)0.0375 (12)0.0401 (12)−0.0023 (10)0.0062 (10)0.0058 (9)
C130.0404 (12)0.0379 (12)0.0430 (12)−0.0038 (10)0.0093 (10)0.0027 (10)
C140.0436 (12)0.0471 (13)0.0341 (11)−0.0097 (10)0.0119 (9)0.0002 (9)
C150.0554 (15)0.0574 (16)0.0500 (14)0.0057 (12)0.0196 (12)0.0049 (12)
N10.0464 (11)0.0442 (11)0.0375 (10)−0.0024 (9)0.0137 (8)0.0008 (8)
N20.0430 (10)0.0478 (11)0.0309 (9)−0.0097 (9)0.0060 (8)0.0069 (8)
O10.0587 (11)0.0491 (10)0.0484 (10)0.0193 (8)0.0201 (9)0.0144 (8)
O20.0554 (10)0.0611 (11)0.0381 (8)0.0056 (8)0.0161 (8)0.0179 (8)
C1—C21.381 (3)C9—C101.371 (3)
C1—C61.396 (3)C9—C141.393 (3)
C1—N21.444 (3)C9—N11.450 (3)
C2—C31.395 (3)C10—C111.378 (3)
C2—H20.9300C10—H100.9300
C3—C41.404 (3)C11—C121.397 (4)
C3—C71.476 (3)C11—H110.9300
C4—O11.343 (3)C12—C131.383 (3)
C4—C51.402 (3)C12—H120.9300
C5—C61.371 (3)C13—C141.398 (3)
C5—H50.9300C13—C151.493 (4)
C6—H60.9300C14—H140.9300
C7—O21.235 (3)C15—H15A0.9600
C7—C81.488 (3)C15—H15B0.9600
C8—H8A0.9600C15—H15C0.9600
C8—H8B0.9600N1—N21.242 (3)
C8—H8C0.9600O1—H10.83 (4)
C2—C1—C6119.43 (19)C10—C9—C14121.7 (2)
C2—C1—N2114.66 (19)C10—C9—N1115.3 (2)
C6—C1—N2125.89 (19)C14—C9—N1123.0 (2)
C1—C2—C3121.3 (2)C9—C10—C11119.3 (2)
C1—C2—H2119.3C9—C10—H10120.4
C3—C2—H2119.3C11—C10—H10120.4
C2—C3—C4118.39 (19)C10—C11—C12119.6 (2)
C2—C3—C7121.4 (2)C10—C11—H11120.2
C4—C3—C7120.20 (19)C12—C11—H11120.2
O1—C4—C5117.2 (2)C13—C12—C11121.7 (2)
O1—C4—C3122.5 (2)C13—C12—H12119.2
C5—C4—C3120.23 (19)C11—C12—H12119.2
C6—C5—C4120.0 (2)C12—C13—C14118.2 (2)
C6—C5—H5120.0C12—C13—C15120.3 (2)
C4—C5—H5120.0C14—C13—C15121.5 (2)
C5—C6—C1120.6 (2)C9—C14—C13119.5 (2)
C5—C6—H6119.7C9—C14—H14120.2
C1—C6—H6119.7C13—C14—H14120.2
O2—C7—C3120.3 (2)C13—C15—H15A109.5
O2—C7—C8119.8 (2)C13—C15—H15B109.5
C3—C7—C8119.90 (19)H15A—C15—H15B109.5
C7—C8—H8A109.5C13—C15—H15C109.5
C7—C8—H8B109.5H15A—C15—H15C109.5
H8A—C8—H8B109.5H15B—C15—H15C109.5
C7—C8—H8C109.5N2—N1—C9114.0 (2)
H8A—C8—H8C109.5N1—N2—C1113.3 (2)
H8B—C8—H8C109.5C4—O1—H1102 (2)
C6—C1—C2—C31.1 (3)C4—C3—C7—C8176.5 (2)
N2—C1—C2—C3−177.57 (18)C14—C9—C10—C11−2.0 (3)
C1—C2—C3—C4−0.8 (3)N1—C9—C10—C11177.8 (2)
C1—C2—C3—C7177.24 (19)C9—C10—C11—C120.6 (3)
C2—C3—C4—O1179.8 (2)C10—C11—C12—C131.0 (4)
C7—C3—C4—O11.7 (3)C11—C12—C13—C14−1.3 (3)
C2—C3—C4—C5−0.2 (3)C11—C12—C13—C15178.9 (2)
C7—C3—C4—C5−178.3 (2)C10—C9—C14—C131.8 (3)
O1—C4—C5—C6−179.1 (2)N1—C9—C14—C13−178.01 (19)
C3—C4—C5—C60.9 (3)C12—C13—C14—C9−0.1 (3)
C4—C5—C6—C1−0.5 (3)C15—C13—C14—C9179.7 (2)
C2—C1—C6—C5−0.5 (3)C10—C9—N1—N2−177.6 (2)
N2—C1—C6—C5178.1 (2)C14—C9—N1—N22.2 (3)
C2—C3—C7—O2−179.8 (2)C9—N1—N2—C1−179.99 (17)
C4—C3—C7—O2−1.8 (3)C2—C1—N2—N1177.09 (19)
C2—C3—C7—C8−1.4 (3)C6—C1—N2—N1−1.5 (3)
D—H···AD—HH···AD···AD—H···A
O1—H1···O20.84 (4)1.78 (4)2.567 (3)156 (4)
ParametersX-rayPM3DFT/B3LYP*
C4—O11.343 (3)1.3511.331
C7—O21.235 (3)1.2281.242
C7—C81.488 (3)1.5021.513
C13—C151.493 (4)1.4861.511
C1—N21.444 (3)1.4451.411
N1—N21.242 (3)1.2321.263
C9—N11.450 (3)1.4471.417
O2—C7—C8119.8 (2)120.465118.986
O1—C4—C5117.2 (2)115.387118.123
C7—C3—C4—O11.7 (3)-0.0160.002
C9—N1—N2—C1-179.99 (17)-179.965-179.975
C2—C1—N2—N1177.09 (19)-178.543179.996
C10—C9—N1—N2-177.6 (2)-172.651179.997
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H1⋯O20.84 (4)1.78 (4)2.567 (3)156 (4)
Table 2

Selected geometric parameters (Å, °) calculated with X-ray, PM3 and DFT

ParametersX-rayPM3DFT/B3LYP*
C4—O11.343 (3)1.3511.331
C7—O21.235 (3)1.2281.242
C7—C81.488 (3)1.5021.513
C13—C151.493 (4)1.4861.511
C1—N21.444 (3)1.4451.411
N1—N21.242 (3)1.2321.263
C9—N11.450 (3)1.4471.417
O2—C7—C8119.8 (2)120.465118.986
O1—C4—C5117.2 (2)115.387118.123
C7—C3—C4—O11.7 (3)−0.0160.002
C9—N1—N2—C1−179.99 (17)−179.965−179.975
C2—C1—N2—N1177.09 (19)−178.543179.996
C10—C9—N1—N2−177.6 (2)−172.651179.997

*6–31G(d,p).

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