| Literature DB >> 21580326 |
Madhukar Hemamalini1, Hoong-Kun Fun.
Abstract
In the title salt, C(5)H(6)ClN(2) (+)·C(7)H(5)O(3) (-), the carboxyl-ate mean plane of the 4-hydroxy-benzoate anion is twisted by 7.16 (9)° from the attached ring. In the crystal structure, the cations and anions are linked via O-H⋯O and N-H⋯O hydrogen bonds, as well as C-H⋯O contacts, forming a three-dimensional network. In addition, weak π-π inter-actions involving the benzene and pyridinium rings, with centroid-to-centroid distances of 3.8941 (9) Å, are observed.Entities:
Year: 2010 PMID: 21580326 PMCID: PMC2983740 DOI: 10.1107/S1600536810004265
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H6ClN2+·C7H5O3− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4875 reflections |
| θ = 2.3–29.9° | |
| µ = 0.31 mm−1 | |
| β = 116.113 (2)° | Block, colourless |
| 0.69 × 0.20 × 0.14 mm | |
| Bruker SMART APEXII CCD area-detector diffractometer | 3630 independent reflections |
| Radiation source: fine-focus sealed tube | 2663 reflections with |
| graphite | |
| φ and ω scans | θmax = 30.1°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 12446 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| All H-atom parameters refined | |
| 3630 reflections | (Δ/σ)max < 0.001 |
| 207 parameters | Δρmax = 0.22 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cryosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) k. |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cl1 | 0.21064 (4) | 0.98776 (4) | −0.17272 (4) | 0.06226 (15) | |
| N1 | 0.51321 (13) | 0.78671 (10) | 0.07645 (11) | 0.0444 (3) | |
| N2 | 0.63089 (16) | 0.77385 (14) | 0.29586 (13) | 0.0574 (3) | |
| C1 | 0.53134 (15) | 0.82441 (12) | 0.19187 (13) | 0.0439 (3) | |
| C2 | 0.44186 (16) | 0.91497 (14) | 0.19530 (14) | 0.0510 (4) | |
| C3 | 0.34358 (17) | 0.96337 (14) | 0.08507 (15) | 0.0512 (4) | |
| C4 | 0.33162 (14) | 0.92372 (13) | −0.03259 (13) | 0.0454 (3) | |
| C5 | 0.41534 (15) | 0.83516 (13) | −0.03444 (13) | 0.0454 (3) | |
| O1 | 0.00092 (13) | 0.66336 (10) | 0.45630 (11) | 0.0579 (3) | |
| O2 | 0.34526 (13) | 1.11961 (9) | 0.47186 (9) | 0.0567 (3) | |
| O3 | 0.22698 (11) | 1.09176 (8) | 0.26301 (8) | 0.0463 (2) | |
| C6 | 0.21056 (18) | 0.92410 (14) | 0.51840 (13) | 0.0531 (4) | |
| C7 | 0.14592 (19) | 0.82697 (15) | 0.53591 (13) | 0.0563 (4) | |
| C8 | 0.06192 (15) | 0.75826 (12) | 0.43312 (13) | 0.0438 (3) | |
| C9 | 0.04555 (15) | 0.78713 (12) | 0.31209 (12) | 0.0426 (3) | |
| C10 | 0.11107 (14) | 0.88452 (12) | 0.29507 (12) | 0.0397 (3) | |
| C11 | 0.19355 (14) | 0.95522 (12) | 0.39715 (11) | 0.0392 (3) | |
| C12 | 0.25875 (14) | 1.06243 (12) | 0.37582 (12) | 0.0398 (3) | |
| H2A | 0.4538 (17) | 0.9382 (14) | 0.2769 (16) | 0.059 (5)* | |
| H3A | 0.283 (2) | 1.0251 (15) | 0.0866 (17) | 0.064 (5)* | |
| H5A | 0.4139 (17) | 0.8021 (14) | −0.1096 (16) | 0.060 (5)* | |
| H6A | 0.2676 (19) | 0.9721 (15) | 0.5889 (17) | 0.065 (5)* | |
| H7A | 0.1571 (19) | 0.8087 (16) | 0.6168 (18) | 0.068 (5)* | |
| H9A | −0.0099 (17) | 0.7369 (13) | 0.2417 (15) | 0.054 (4)* | |
| H10A | 0.1007 (16) | 0.9043 (13) | 0.2125 (15) | 0.048 (4)* | |
| H1O1 | −0.053 (2) | 0.6331 (17) | 0.386 (2) | 0.073 (6)* | |
| H1N1 | 0.575 (2) | 0.7250 (16) | 0.0689 (18) | 0.076 (6)* | |
| H1N2 | 0.6509 (19) | 0.8050 (16) | 0.3681 (18) | 0.062 (5)* | |
| H2N2 | 0.689 (2) | 0.7177 (19) | 0.2877 (19) | 0.080 (6)* |
| Cl1 | 0.0607 (2) | 0.0623 (3) | 0.0572 (2) | 0.00938 (18) | 0.01990 (18) | 0.00670 (19) |
| N1 | 0.0523 (6) | 0.0433 (6) | 0.0410 (6) | 0.0039 (5) | 0.0235 (5) | −0.0053 (5) |
| N2 | 0.0729 (8) | 0.0590 (9) | 0.0403 (6) | 0.0110 (7) | 0.0249 (6) | −0.0023 (6) |
| C1 | 0.0515 (7) | 0.0438 (7) | 0.0425 (6) | −0.0042 (6) | 0.0262 (6) | −0.0069 (6) |
| C2 | 0.0587 (8) | 0.0536 (9) | 0.0476 (7) | 0.0000 (7) | 0.0297 (6) | −0.0132 (7) |
| C3 | 0.0528 (7) | 0.0479 (9) | 0.0585 (8) | 0.0037 (7) | 0.0297 (7) | −0.0092 (7) |
| C4 | 0.0441 (6) | 0.0451 (8) | 0.0475 (7) | −0.0022 (6) | 0.0206 (5) | −0.0043 (6) |
| C5 | 0.0504 (7) | 0.0467 (8) | 0.0416 (7) | 0.0000 (6) | 0.0226 (6) | −0.0071 (6) |
| O1 | 0.0716 (7) | 0.0539 (7) | 0.0450 (5) | −0.0210 (6) | 0.0228 (5) | 0.0014 (5) |
| O2 | 0.0799 (7) | 0.0531 (6) | 0.0401 (5) | −0.0245 (5) | 0.0291 (5) | −0.0082 (5) |
| O3 | 0.0597 (5) | 0.0440 (5) | 0.0370 (4) | 0.0000 (4) | 0.0229 (4) | 0.0042 (4) |
| C6 | 0.0709 (9) | 0.0536 (9) | 0.0333 (6) | −0.0166 (8) | 0.0217 (6) | −0.0052 (6) |
| C7 | 0.0763 (10) | 0.0591 (10) | 0.0347 (6) | −0.0180 (8) | 0.0256 (7) | 0.0003 (7) |
| C8 | 0.0486 (7) | 0.0423 (7) | 0.0406 (6) | −0.0039 (6) | 0.0197 (5) | 0.0024 (6) |
| C9 | 0.0485 (6) | 0.0418 (7) | 0.0345 (6) | −0.0032 (6) | 0.0155 (5) | −0.0028 (6) |
| C10 | 0.0466 (6) | 0.0403 (7) | 0.0329 (6) | 0.0027 (6) | 0.0181 (5) | 0.0014 (5) |
| C11 | 0.0459 (6) | 0.0384 (7) | 0.0348 (6) | 0.0000 (5) | 0.0192 (5) | −0.0001 (5) |
| C12 | 0.0480 (6) | 0.0380 (7) | 0.0372 (6) | 0.0018 (6) | 0.0224 (5) | −0.0011 (5) |
| Cl1—C4 | 1.7241 (15) | O1—H1O1 | 0.83 (2) |
| N1—C1 | 1.3511 (17) | O2—C12 | 1.2682 (15) |
| N1—C5 | 1.3595 (18) | O3—C12 | 1.2577 (15) |
| N1—H1N1 | 0.99 (2) | C6—C7 | 1.375 (2) |
| N2—C1 | 1.3271 (19) | C6—C11 | 1.3963 (18) |
| N2—H1N2 | 0.858 (19) | C6—H6A | 0.954 (18) |
| N2—H2N2 | 0.91 (2) | C7—C8 | 1.384 (2) |
| C1—C2 | 1.408 (2) | C7—H7A | 0.925 (19) |
| C2—C3 | 1.356 (2) | C8—C9 | 1.3892 (19) |
| C2—H2A | 0.946 (16) | C9—C10 | 1.3798 (19) |
| C3—C4 | 1.403 (2) | C9—H9A | 0.965 (16) |
| C3—H3A | 0.953 (18) | C10—C11 | 1.3889 (18) |
| C4—C5 | 1.347 (2) | C10—H10A | 0.950 (15) |
| C5—H5A | 0.953 (17) | C11—C12 | 1.4929 (19) |
| O1—C8 | 1.3581 (17) | ||
| C1—N1—C5 | 122.24 (12) | C7—C6—C11 | 120.90 (13) |
| C1—N1—H1N1 | 121.1 (11) | C7—C6—H6A | 120.6 (11) |
| C5—N1—H1N1 | 116.5 (11) | C11—C6—H6A | 118.5 (11) |
| C1—N2—H1N2 | 117.6 (12) | C6—C7—C8 | 120.42 (13) |
| C1—N2—H2N2 | 119.3 (13) | C6—C7—H7A | 119.5 (11) |
| H1N2—N2—H2N2 | 121.8 (18) | C8—C7—H7A | 120.1 (11) |
| N2—C1—N1 | 118.66 (13) | O1—C8—C7 | 117.77 (12) |
| N2—C1—C2 | 123.35 (13) | O1—C8—C9 | 122.79 (12) |
| N1—C1—C2 | 117.98 (13) | C7—C8—C9 | 119.43 (13) |
| C3—C2—C1 | 120.07 (13) | C10—C9—C8 | 119.92 (12) |
| C3—C2—H2A | 123.3 (10) | C10—C9—H9A | 121.4 (10) |
| C1—C2—H2A | 116.6 (10) | C8—C9—H9A | 118.7 (10) |
| C2—C3—C4 | 120.00 (14) | C9—C10—C11 | 121.19 (12) |
| C2—C3—H3A | 120.6 (11) | C9—C10—H10A | 120.2 (9) |
| C4—C3—H3A | 119.4 (11) | C11—C10—H10A | 118.7 (9) |
| C5—C4—C3 | 119.20 (13) | C10—C11—C6 | 118.13 (13) |
| C5—C4—Cl1 | 120.66 (11) | C10—C11—C12 | 120.30 (11) |
| C3—C4—Cl1 | 120.14 (11) | C6—C11—C12 | 121.56 (12) |
| C4—C5—N1 | 120.45 (13) | O3—C12—O2 | 122.55 (12) |
| C4—C5—H5A | 125.1 (10) | O3—C12—C11 | 118.55 (11) |
| N1—C5—H5A | 114.5 (10) | O2—C12—C11 | 118.89 (11) |
| C8—O1—H1O1 | 108.3 (14) | ||
| C5—N1—C1—N2 | −178.89 (13) | C6—C7—C8—C9 | 1.2 (2) |
| C5—N1—C1—C2 | 1.8 (2) | O1—C8—C9—C10 | −179.65 (13) |
| N2—C1—C2—C3 | 179.25 (15) | C7—C8—C9—C10 | −0.9 (2) |
| N1—C1—C2—C3 | −1.5 (2) | C8—C9—C10—C11 | −0.2 (2) |
| C1—C2—C3—C4 | −0.4 (2) | C9—C10—C11—C6 | 1.0 (2) |
| C2—C3—C4—C5 | 2.1 (2) | C9—C10—C11—C12 | −177.69 (12) |
| C2—C3—C4—Cl1 | −178.10 (12) | C7—C6—C11—C10 | −0.8 (2) |
| C3—C4—C5—N1 | −1.8 (2) | C7—C6—C11—C12 | 177.90 (15) |
| Cl1—C4—C5—N1 | 178.38 (11) | C10—C11—C12—O3 | 5.95 (19) |
| C1—N1—C5—C4 | −0.2 (2) | C6—C11—C12—O3 | −172.73 (13) |
| C11—C6—C7—C8 | −0.3 (3) | C10—C11—C12—O2 | −173.19 (12) |
| C6—C7—C8—O1 | 179.94 (15) | C6—C11—C12—O2 | 8.1 (2) |
| H··· | ||||
| O1—H1O1···O3i | 0.84 (2) | 1.91 (2) | 2.7132 (15) | 160 (2) |
| N1—H1N1···O2ii | 0.99 (2) | 1.66 (2) | 2.6320 (18) | 169.2 (18) |
| N2—H1N2···O2iii | 0.857 (19) | 2.051 (19) | 2.8972 (18) | 169 (2) |
| N2—H2N2···O3ii | 0.92 (2) | 1.93 (2) | 2.825 (2) | 167 (2) |
| C3—H3A···O3 | 0.95 (2) | 2.488 (19) | 3.181 (2) | 129.5 (14) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1 | 0.84 (2) | 1.91 (2) | 2.7132 (15) | 160 (2) |
| N1—H1 | 0.99 (2) | 1.66 (2) | 2.6320 (18) | 169.2 (18) |
| N2—H1 | 0.857 (19) | 2.051 (19) | 2.8972 (18) | 169 (2) |
| N2—H2 | 0.92 (2) | 1.93 (2) | 2.825 (2) | 167 (2) |
| C3—H3 | 0.95 (2) | 2.488 (19) | 3.181 (2) | 129.5 (14) |
Symmetry codes: (i) ; (ii) ; (iii) .