Literature DB >> 21580240

trans-Chlorido(dimethyl sulfoxide-κS)(pyridine-2-carboxyl-ato-κN,O)platinum(II).

Kwang Ha1.   

Abstract

In the title complex, [Pt(C(6)H(4)NO(2))Cl(C(2)H(6)OS)], the Pt(II) ion is in a distorted square-planar environment defined by the N and O atoms from the chelating pyridine-2-carboxyl-ate (pic) anionic ligand, one S atom of the dimethyl sulfoxide mol-ecule and one Cl ion. The complex is disposed about a crystallographic mirror plane parallel to the ac plane passing through all the atoms of the complex except the methyl atoms of the dimethyl sulfoxide. The mol-ecules are stacked in columns along the b axis with a PtPt distance of 4.9508 (5) Å. Within the column, inter-molecular C-H⋯O hydrogen bonds and weak π-π inter-actions between adjacent pyridine rings are present, the shortest centroid-centroid distance being 5.153 (4) Å.

Entities:  

Year:  2010        PMID: 21580240      PMCID: PMC2983664          DOI: 10.1107/S1600536810005520

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structure of the title complex with the monoclinic space group P21/n, see: Annibale et al. (1986 ▶). For details of Pt(IV)–pic complexes, see: Griffith et al. (2005 ▶); Kim et al. (2009 ▶).

Experimental

Crystal data

[Pt(C6H4NO2)Cl(C2H6OS)] M = 430.77 Orthorhombic, a = 19.5900 (15) Å b = 6.9450 (6) Å c = 8.1266 (6) Å V = 1105.64 (15) Å3 Z = 4 Mo Kα radiation μ = 13.11 mm−1 T = 200 K 0.21 × 0.17 × 0.09 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.631, T max = 1.000 6423 measured reflections 1169 independent reflections 1085 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.027 wR(F 2) = 0.065 S = 1.10 1169 reflections 89 parameters H-atom parameters constrained Δρmax = 2.60 e Å−3 Δρmin = −0.79 e Å−3 Data collection: SMART (Bruker, 2000 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I. DOI: 10.1107/S1600536810005520/si2243sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810005520/si2243Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pt(C6H4NO2)Cl(C2H6OS)]F(000) = 800
Mr = 430.77Dx = 2.588 Mg m3
Orthorhombic, PnmaMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ac 2nCell parameters from 3961 reflections
a = 19.5900 (15) Åθ = 2.7–26.0°
b = 6.9450 (6) ŵ = 13.11 mm1
c = 8.1266 (6) ÅT = 200 K
V = 1105.64 (15) Å3Block, colorless
Z = 40.21 × 0.17 × 0.09 mm
Bruker SMART 1000 CCD diffractometer1169 independent reflections
Radiation source: fine-focus sealed tube1085 reflections with I > 2σ(I)
graphiteRint = 0.042
φ and ω scansθmax = 26.0°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −24→23
Tmin = 0.631, Tmax = 1.000k = −8→8
6423 measured reflectionsl = −7→10
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.027Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.065H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0345P)2 + 1.8204P] where P = (Fo2 + 2Fc2)/3
1169 reflections(Δ/σ)max = 0.001
89 parametersΔρmax = 2.60 e Å3
0 restraintsΔρmin = −0.79 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pt10.087714 (15)0.25001.04929 (4)0.01771 (13)
Cl10.14026 (11)0.25001.3016 (2)0.0265 (5)
S10.18928 (11)0.25000.9332 (2)0.0209 (4)
O1−0.0036 (3)0.25001.1647 (7)0.0243 (13)
O2−0.1160 (3)0.25001.1182 (8)0.0311 (14)
O30.1947 (3)0.25000.7524 (8)0.0353 (15)
N10.0258 (3)0.25000.8489 (8)0.0204 (15)
C10.0441 (5)0.25000.6884 (10)0.029 (2)
H10.09110.25000.65960.035*
C2−0.0051 (5)0.25000.5652 (11)0.035 (2)
H20.00850.25000.45300.042*
C3−0.0726 (4)0.25000.6045 (12)0.0274 (19)
H3−0.10660.25000.52110.033*
C4−0.0903 (4)0.25000.7672 (12)0.028 (2)
H4−0.13720.25000.79680.034*
C5−0.0410 (4)0.25000.8904 (11)0.0205 (17)
C6−0.0570 (4)0.25001.0681 (10)0.0217 (18)
C70.2372 (3)0.0507 (9)1.0071 (8)0.0300 (14)
H7A0.2145−0.06940.97550.045*
H7B0.24050.05771.12730.045*
H7C0.28320.05390.95930.045*
U11U22U33U12U13U23
Pt10.0175 (2)0.02225 (19)0.0134 (2)0.0000.00107 (12)0.000
Cl10.0231 (11)0.0425 (12)0.0138 (10)0.000−0.0040 (8)0.000
S10.0195 (11)0.0258 (10)0.0174 (10)0.0000.0024 (8)0.000
O10.018 (3)0.044 (3)0.011 (3)0.0000.003 (2)0.000
O20.024 (3)0.047 (4)0.022 (3)0.0000.003 (3)0.000
O30.036 (4)0.055 (4)0.015 (3)0.0000.016 (3)0.000
N10.023 (4)0.019 (3)0.019 (4)0.0000.000 (3)0.000
C10.028 (5)0.049 (5)0.009 (4)0.0000.003 (3)0.000
C20.037 (6)0.047 (6)0.020 (5)0.000−0.001 (4)0.000
C30.021 (5)0.038 (5)0.023 (5)0.000−0.006 (4)0.000
C40.023 (5)0.033 (5)0.028 (5)0.0000.001 (4)0.000
C50.023 (4)0.013 (3)0.025 (4)0.000−0.002 (4)0.000
C60.019 (4)0.024 (4)0.022 (5)0.0000.002 (3)0.000
C70.023 (3)0.029 (3)0.038 (4)0.007 (3)0.005 (3)0.005 (3)
Pt1—O12.020 (5)C1—H10.9500
Pt1—N12.031 (7)C2—C31.361 (13)
Pt1—S12.202 (2)C2—H20.9500
Pt1—Cl12.2945 (19)C3—C41.367 (14)
S1—O31.473 (6)C3—H30.9500
S1—C7i1.778 (6)C4—C51.390 (13)
S1—C71.778 (6)C4—H40.9500
O1—C61.308 (10)C5—C61.477 (12)
O2—C61.225 (11)C7—H7A0.9800
N1—C51.352 (10)C7—H7B0.9800
N1—C11.352 (11)C7—H7C0.9800
C1—C21.390 (13)
O1—Pt1—N181.0 (2)C3—C2—H2119.8
O1—Pt1—S1177.70 (16)C1—C2—H2119.8
N1—Pt1—S1101.31 (19)C2—C3—C4118.2 (8)
O1—Pt1—Cl188.98 (16)C2—C3—H3120.9
N1—Pt1—Cl1169.97 (19)C4—C3—H3120.9
S1—Pt1—Cl188.72 (7)C3—C4—C5121.4 (8)
O3—S1—C7i107.4 (3)C3—C4—H4119.3
O3—S1—C7107.4 (3)C5—C4—H4119.3
C7i—S1—C7102.3 (5)N1—C5—C4119.5 (8)
O3—S1—Pt1119.5 (3)N1—C5—C6116.7 (7)
C7i—S1—Pt1109.4 (2)C4—C5—C6123.8 (8)
C7—S1—Pt1109.4 (2)O2—C6—O1123.7 (8)
C6—O1—Pt1115.4 (5)O2—C6—C5121.7 (8)
C5—N1—C1119.8 (7)O1—C6—C5114.7 (7)
C5—N1—Pt1112.2 (6)S1—C7—H7A109.5
C1—N1—Pt1127.9 (6)S1—C7—H7B109.5
N1—C1—C2120.7 (8)H7A—C7—H7B109.5
N1—C1—H1119.6S1—C7—H7C109.5
C2—C1—H1119.6H7A—C7—H7C109.5
C3—C2—C1120.3 (9)H7B—C7—H7C109.5
N1—Pt1—S1—O30.0N1—C1—C2—C30.000 (2)
Cl1—Pt1—S1—O3180.0C1—C2—C3—C40.000 (2)
N1—Pt1—S1—C7i124.3 (3)C2—C3—C4—C50.000 (2)
Cl1—Pt1—S1—C7i−55.7 (3)C1—N1—C5—C40.000 (2)
N1—Pt1—S1—C7−124.3 (3)Pt1—N1—C5—C4180.000 (2)
Cl1—Pt1—S1—C755.7 (3)C1—N1—C5—C6180.000 (2)
N1—Pt1—O1—C60.000 (2)Pt1—N1—C5—C60.000 (2)
Cl1—Pt1—O1—C6180.000 (2)C3—C4—C5—N10.000 (2)
O1—Pt1—N1—C50.000 (1)C3—C4—C5—C6180.000 (2)
S1—Pt1—N1—C5180.000 (1)Pt1—O1—C6—O2180.000 (2)
Cl1—Pt1—N1—C50.000 (4)Pt1—O1—C6—C50.000 (2)
O1—Pt1—N1—C1180.000 (1)N1—C5—C6—O2180.000 (2)
S1—Pt1—N1—C10.000 (1)C4—C5—C6—O20.000 (2)
Cl1—Pt1—N1—C1180.000 (3)N1—C5—C6—O10.000 (2)
C5—N1—C1—C20.000 (2)C4—C5—C6—O1180.000 (2)
Pt1—N1—C1—C2180.000 (1)
D—H···AD—HH···AD···AD—H···A
C1—H1···O30.952.162.995 (11)145
C2—H2···O1ii0.952.353.255 (11)158
C7—H7A···O2iii0.982.423.323 (8)152
C7—H7B···Cl10.982.773.355 (7)119
Pt1—O12.020 (5)
Pt1—N12.031 (7)
Pt1—S12.202 (2)
Pt1—Cl12.2945 (19)
O1—Pt1—N181.0 (2)
O1—Pt1—S1177.70 (16)
N1—Pt1—S1101.31 (19)
O1—Pt1—Cl188.98 (16)
N1—Pt1—Cl1169.97 (19)
S1—Pt1—Cl188.72 (7)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O30.952.162.995 (11)145
C2—H2⋯O1i0.952.353.255 (11)158
C7—H7A⋯O2ii0.982.423.323 (8)152
C7—H7B⋯Cl10.982.773.355 (7)119

Symmetry codes: (i) ; (ii) .

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