Literature DB >> 21580231

(Acetato-κO)(2,2'-bipyridine-κN,N')trimethyl-platinum(IV) monohydrate.

Cornelia Vetter1, Christoph Wagner, Dirk Steinborn.   

Abstract

In the title hydrate, [Pt(CH(3))(3)(CH(3)COO)(C(10)H(8)N(2))]·H(2)O, the Pt(IV) atom exhibits a distorted octa-hedral coordination geometry built up by three methyl ligands in a facial arrangement, a bipyridine ligand and a monodentately bound acetate ligand. In the crystal structure, inter-molecular O-H⋯O hydrogen bonds are observed between the water mol-ecule and the platinum complex, which link the mol-ecules into chains along the c axis.

Entities:  

Year:  2010        PMID: 21580231      PMCID: PMC2983493          DOI: 10.1107/S160053681000499X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For ligand-substitution reactions of platinum complexes, see: Vetter et al. (2006 ▶); Clegg et al. (1972 ▶); Lindner et al. (2008 ▶); Steinborn & Junicke (2000 ▶). For a description of the Cambridge Structural Database, see: Allen (2002 ▶).

Experimental

Crystal data

[Pt(CH3)3(C2H3O2)(C10H8N2)]·H2O M = 473.44 Monoclinic, a = 10.972 (3) Å b = 13.455 (3) Å c = 13.768 (3) Å β = 125.05 (3)° V = 1663.9 (8) Å3 Z = 4 Mo Kα radiation μ = 8.44 mm−1 T = 293 K 0.48 × 0.34 × 0.24 mm

Data collection

Stoe STADI-IV diffractometer Absorption correction: ψ scan (X-RED32; Stoe & Cie, 1996 ▶) T min = 0.031, T max = 0.089 4494 measured reflections 2931 independent reflections 2455 reflections with I > 2σ(I) R int = 0.031 2 standard reflections every 60 min intensity decay: random, +−5%

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.119 S = 1.06 2931 reflections 199 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 1.61 e Å−3 Δρmin = −1.79 e Å−3 Data collection: STADI4 (Stoe & Cie, 1996 ▶); cell refinement: STADI4; data reduction: STADI4; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: DIAMOND (Brandenburg, 2001 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053681000499X/tk2621sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681000499X/tk2621Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pt(CH3)3(C2H3O2)(C10H8N2)]·H2OF(000) = 912
Mr = 473.44Dx = 1.890 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 26 reflections
a = 10.972 (3) Åθ = 15.1–25.2°
b = 13.455 (3) ŵ = 8.44 mm1
c = 13.768 (3) ÅT = 293 K
β = 125.05 (3)°Block, orange
V = 1663.9 (8) Å30.48 × 0.34 × 0.24 mm
Z = 4
Stoe STADI-IV diffractometer2455 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.031
graphiteθmax = 25.0°, θmin = 2.3°
ω/2θ scansh = −13→13
Absorption correction: ψ scan (X-RED32; Stoe & Cie, 1996)k = −16→0
Tmin = 0.031, Tmax = 0.089l = −13→16
4494 measured reflections2 standard reflections every 60 min
2931 independent reflections intensity decay: random, +−5%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.119w = 1/[σ2(Fo2) + (0.0676P)2 + 4.3682P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
2931 reflectionsΔρmax = 1.61 e Å3
199 parametersΔρmin = −1.79 e Å3
2 restraintsExtinction correction: SHELXL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.0018 (3)
Primary atom site location: structure-invariant direct methods
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1−0.0620 (12)0.7592 (8)0.1850 (9)0.072 (3)
H1−0.05350.76730.11980.087*
H3−0.16290.77140.15840.087*
H2−0.03450.69260.21500.087*
C2−0.0048 (12)0.7967 (10)0.4045 (11)0.081 (3)
H60.04120.82840.48040.097*
H50.01700.72690.41580.097*
H4−0.11060.80630.35910.097*
C3−0.0935 (11)0.9574 (8)0.2409 (10)0.069 (3)
H9−0.06031.01750.28690.083*
H8−0.17600.93040.23870.083*
H7−0.12410.97180.16160.083*
C40.3091 (10)0.7018 (7)0.3608 (9)0.058 (2)
C50.4295 (13)0.6271 (9)0.4412 (12)0.081 (4)
H110.46360.59500.39860.098*
H100.38990.57820.46670.098*
H120.51130.66080.50910.098*
C60.2491 (12)0.9787 (10)0.5540 (9)0.077 (3)
H130.20510.93580.57840.093*
C70.3426 (14)1.0548 (11)0.6304 (10)0.092 (4)
H140.35831.06380.70380.110*
C80.4096 (15)1.1153 (11)0.5953 (15)0.098 (5)
H150.47381.16520.64540.117*
C90.3823 (12)1.1025 (9)0.4859 (13)0.085 (4)
H160.42761.14370.46110.102*
C100.2869 (9)1.0279 (7)0.4123 (9)0.058 (2)
C110.2542 (10)1.0116 (7)0.2937 (9)0.057 (2)
C120.3080 (12)1.0709 (9)0.2434 (14)0.085 (4)
H170.36481.12710.28290.102*
C130.2752 (16)1.0446 (13)0.1327 (15)0.098 (5)
H180.31031.08320.09750.117*
C140.1935 (17)0.9642 (12)0.0776 (12)0.091 (4)
H190.17190.94590.00410.109*
C150.1410 (13)0.9078 (9)0.1301 (9)0.069 (3)
H200.08460.85140.09110.083*
N10.2221 (8)0.9665 (5)0.4471 (6)0.0486 (16)
N20.1687 (8)0.9318 (6)0.2344 (6)0.0525 (17)
O10.2551 (7)0.7497 (5)0.4062 (6)0.0615 (17)
O20.2727 (10)0.7105 (7)0.2563 (8)0.089 (2)
O30.4338 (10)0.7587 (8)0.6577 (9)0.088 (3)
H210.382 (12)0.767 (9)0.685 (10)0.07 (4)*
H220.379 (15)0.763 (12)0.580 (10)0.12 (6)*
Pt10.07572 (3)0.85719 (3)0.31606 (3)0.04758 (19)
U11U22U33U12U13U23
C10.077 (7)0.052 (6)0.069 (7)−0.020 (5)0.031 (6)0.003 (5)
C20.070 (6)0.095 (9)0.094 (8)0.007 (6)0.057 (6)0.031 (7)
C30.057 (5)0.067 (7)0.075 (7)0.015 (5)0.033 (5)0.015 (5)
C40.058 (5)0.050 (5)0.066 (6)0.001 (4)0.036 (5)0.008 (5)
C50.071 (7)0.076 (8)0.100 (9)0.017 (6)0.050 (7)0.004 (6)
C60.075 (7)0.102 (9)0.054 (6)0.018 (6)0.036 (5)−0.005 (6)
C70.079 (8)0.108 (11)0.054 (6)0.023 (8)0.018 (6)−0.027 (7)
C80.069 (8)0.082 (9)0.107 (12)−0.003 (6)0.030 (8)−0.035 (8)
C90.055 (6)0.068 (7)0.103 (10)−0.002 (5)0.029 (6)−0.020 (7)
C100.043 (4)0.049 (5)0.073 (6)0.009 (4)0.027 (4)−0.003 (4)
C110.055 (5)0.055 (6)0.072 (6)0.018 (4)0.042 (5)0.017 (5)
C120.066 (6)0.070 (7)0.134 (12)0.007 (6)0.067 (7)0.031 (8)
C130.095 (9)0.120 (13)0.116 (12)0.016 (8)0.083 (9)0.047 (10)
C140.106 (9)0.121 (12)0.079 (8)0.039 (9)0.072 (8)0.037 (8)
C150.088 (7)0.078 (7)0.058 (6)0.014 (6)0.051 (6)0.003 (5)
N10.048 (4)0.051 (4)0.048 (4)0.009 (3)0.029 (3)0.006 (3)
N20.056 (4)0.058 (4)0.052 (4)0.008 (4)0.036 (3)0.009 (4)
O10.063 (4)0.062 (4)0.055 (4)0.014 (3)0.032 (3)0.006 (3)
O20.108 (6)0.095 (6)0.084 (6)0.025 (5)0.067 (5)0.014 (5)
O30.070 (5)0.118 (8)0.068 (5)−0.001 (5)0.035 (5)0.014 (5)
Pt10.0491 (2)0.0487 (3)0.0473 (3)0.00074 (14)0.02902 (18)0.00514 (14)
C1—Pt12.036 (10)C7—H140.9300
C1—H10.9600C8—C91.37 (2)
C1—H30.9600C8—H150.9300
C1—H20.9600C9—C101.382 (15)
C2—Pt12.041 (11)C9—H160.9300
C2—H60.9600C10—N11.345 (13)
C2—H50.9600C10—C111.474 (15)
C2—H40.9600C11—N21.349 (13)
C3—Pt12.032 (9)C11—C121.391 (15)
C3—H90.9600C12—C131.40 (2)
C3—H80.9600C12—H170.9300
C3—H70.9600C13—C141.33 (2)
C4—O21.258 (13)C13—H180.9300
C4—O11.259 (12)C14—C151.381 (17)
C4—C51.518 (14)C14—H190.9300
C5—H110.9600C15—N21.326 (12)
C5—H100.9600C15—H200.9300
C5—H120.9600N1—Pt12.161 (7)
C6—N11.335 (13)N2—Pt12.152 (7)
C6—C71.403 (18)O1—Pt12.168 (6)
C6—H130.9300O3—H210.85 (9)
C7—C81.36 (2)O3—H220.88 (11)
Pt1—C1—H1109.5N1—C10—C11117.4 (8)
Pt1—C1—H3109.5C9—C10—C11121.4 (11)
H1—C1—H3109.5N2—C11—C12120.2 (11)
Pt1—C1—H2109.5N2—C11—C10115.6 (8)
H1—C1—H2109.5C12—C11—C10124.2 (11)
H3—C1—H2109.5C11—C12—C13118.7 (13)
Pt1—C2—H6109.5C11—C12—H17120.6
Pt1—C2—H5109.5C13—C12—H17120.6
H6—C2—H5109.5C14—C13—C12119.7 (12)
Pt1—C2—H4109.5C14—C13—H18120.2
H6—C2—H4109.5C12—C13—H18120.2
H5—C2—H4109.5C13—C14—C15119.7 (13)
Pt1—C3—H9109.5C13—C14—H19120.1
Pt1—C3—H8109.5C15—C14—H19120.1
H9—C3—H8109.5N2—C15—C14121.9 (12)
Pt1—C3—H7109.5N2—C15—H20119.1
H9—C3—H7109.5C14—C15—H20119.1
H8—C3—H7109.5C6—N1—C10119.3 (9)
O2—C4—O1126.2 (9)C6—N1—Pt1126.3 (8)
O2—C4—C5117.9 (10)C10—N1—Pt1114.4 (6)
O1—C4—C5116.0 (10)C15—N2—C11119.8 (9)
C4—C5—H11109.5C15—N2—Pt1124.8 (8)
C4—C5—H10109.5C11—N2—Pt1115.4 (6)
H11—C5—H10109.5C4—O1—Pt1126.0 (6)
C4—C5—H12109.5H21—O3—H22112 (10)
H11—C5—H12109.5C3—Pt1—C189.0 (5)
H10—C5—H12109.5C3—Pt1—C289.2 (5)
N1—C6—C7121.4 (13)C1—Pt1—C285.1 (5)
N1—C6—H13119.3C3—Pt1—N289.6 (4)
C7—C6—H13119.3C1—Pt1—N299.9 (4)
C8—C7—C6118.8 (13)C2—Pt1—N2174.8 (5)
C8—C7—H14120.6C3—Pt1—N189.8 (4)
C6—C7—H14120.6C1—Pt1—N1176.5 (4)
C7—C8—C9119.7 (13)C2—Pt1—N198.2 (4)
C7—C8—H15120.1N2—Pt1—N176.7 (3)
C9—C8—H15120.1C3—Pt1—O1176.2 (4)
C8—C9—C10119.6 (14)C1—Pt1—O192.5 (4)
C8—C9—H16120.2C2—Pt1—O187.4 (4)
C10—C9—H16120.2N2—Pt1—O193.6 (3)
N1—C10—C9121.2 (11)N1—Pt1—O188.9 (3)
N1—C6—C7—C8−1.9 (18)C12—C11—N2—Pt1−173.8 (7)
C6—C7—C8—C92(2)C10—C11—N2—Pt17.6 (9)
C7—C8—C9—C10−0.1 (19)O2—C4—O1—Pt13.0 (15)
C8—C9—C10—N1−1.1 (16)C5—C4—O1—Pt1−177.2 (7)
C8—C9—C10—C11179.9 (10)C15—N2—Pt1—C3−92.8 (8)
N1—C10—C11—N2−4.0 (12)C11—N2—Pt1—C383.5 (7)
C9—C10—C11—N2175.0 (9)C15—N2—Pt1—C1−3.8 (9)
N1—C10—C11—C12177.5 (9)C11—N2—Pt1—C1172.4 (6)
C9—C10—C11—C12−3.5 (14)C15—N2—Pt1—N1177.3 (8)
N2—C11—C12—C13−1.7 (15)C11—N2—Pt1—N1−6.4 (6)
C10—C11—C12—C13176.7 (10)C15—N2—Pt1—O189.3 (8)
C11—C12—C13—C140.2 (19)C11—N2—Pt1—O1−94.5 (6)
C12—C13—C14—C150(2)C6—N1—Pt1—C393.0 (9)
C13—C14—C15—N20.5 (18)C10—N1—Pt1—C3−85.4 (7)
C7—C6—N1—C100.7 (15)C6—N1—Pt1—C23.8 (9)
C7—C6—N1—Pt1−177.7 (8)C10—N1—Pt1—C2−174.6 (6)
C9—C10—N1—C60.8 (13)C6—N1—Pt1—N2−177.4 (8)
C11—C10—N1—C6179.8 (8)C10—N1—Pt1—N24.2 (6)
C9—C10—N1—Pt1179.3 (7)C6—N1—Pt1—O1−83.4 (8)
C11—C10—N1—Pt1−1.7 (10)C10—N1—Pt1—O198.2 (6)
C14—C15—N2—C11−2.0 (15)C4—O1—Pt1—C153.9 (8)
C14—C15—N2—Pt1174.0 (8)C4—O1—Pt1—C2138.9 (9)
C12—C11—N2—C152.6 (13)C4—O1—Pt1—N2−46.2 (8)
C10—C11—N2—C15−176.0 (8)C4—O1—Pt1—N1−122.8 (8)
D—H···AD—HH···AD···AD—H···A
O3—H22···O10.88 (11)1.96 (11)2.836 (12)172 (15)
O3—H21···O2i0.85 (9)1.96 (10)2.810 (14)177 (11)
C1—Pt12.036 (10)
C2—Pt12.041 (11)
C3—Pt12.032 (9)
N1—Pt12.161 (7)
N2—Pt12.152 (7)
O1—Pt12.168 (6)
C1—Pt1—C285.1 (5)
C1—Pt1—N299.9 (4)
C2—Pt1—N2174.8 (5)
C1—Pt1—N1176.5 (4)
C2—Pt1—N198.2 (4)
N2—Pt1—N176.7 (3)
C3—Pt1—O1176.2 (4)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H22⋯O10.88 (11)1.96 (11)2.836 (12)172 (15)
O3—H21⋯O2i0.85 (9)1.96 (10)2.810 (14)177 (11)

Symmetry code: (i) .

  3 in total

1.  Carbohydrate complexes of platinum-group metals.

Authors:  D Steinborn; H Junicke
Journal:  Chem Rev       Date:  2000-12-13       Impact factor: 60.622

2.  The Cambridge Structural Database: a quarter of a million crystal structures and rising.

Authors:  Frank H Allen
Journal:  Acta Crystallogr B       Date:  2002-05-29

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  3 in total
  2 in total

1.  (OC-6-33)-(2,2'-Bipyridine-κN,N')trimeth-yl(2-methyl-sulfanyl-2-thia-zoline-κN)platinum(IV) tetra-fluoridoborate.

Authors:  Cornelia Vetter; Clemens Bruhn; Dirk Steinborn
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-07-17

2.  (5,5'-Dimethyl-2,2'-bipyridine)-iodido-trimethyl-platinum(IV).

Authors:  Fredrik Lundvall; David Stephen Wragg; Mats Tilset
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-22
  2 in total

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