| Literature DB >> 21580122 |
M A A A A Islam, M T H Tarafder, C M Zakaria, N Guidolin, E Zangrando.
Abstract
In the title compound, C(16)H(25)N(3)OS, the thio-semicarbazone group adopts an E configuration with respect to the C=N bond and is almost coplanar with the benzene ring, forming a dihedral angle of 9.3 (1)°. In the crystal packing, the mol-ecules lie along the a axis in an anti-parallel arrangement and are held in place by van der Waals inter-actions. As a consequence, there is relatively low anisotropic thermal motion in the terminal atoms of the n-octyl chain.Entities:
Year: 2009 PMID: 21580122 PMCID: PMC2980035 DOI: 10.1107/S1600536809054841
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C16H25N3OS | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 146 reflections | |
| θ = 3.0–18.1° | |
| µ = 0.19 mm−1 | |
| α = 94.74 (2)° | |
| β = 91.85 (2)° | Plate, colorless |
| γ = 104.42 (3)° | 0.42 × 0.40 × 0.14 mm |
| Enraf–Nonius dip1030 image-plate diffractometer | 2749 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.7°, θmin = 3.6° |
| φ–scans with narrow frames | |
| 9930 measured reflections | |
| 3226 independent reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 3226 reflections | (Δ/σ)max < 0.001 |
| 191 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.18 e Å−3 |
| Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 1.33919 (6) | −0.29398 (5) | 0.99374 (2) | 0.06930 (19) | |
| N1 | 1.0386 (2) | 0.02579 (17) | 0.89975 (6) | 0.0648 (3) | |
| N2 | 1.1983 (2) | −0.04336 (17) | 0.93483 (6) | 0.0690 (3) | |
| H2 | 1.3435 | 0.0203 | 0.9421 | 0.083* | |
| N3 | 0.9025 (2) | −0.29670 (17) | 0.94909 (6) | 0.0668 (3) | |
| H3A | 0.8033 | −0.2489 | 0.9295 | 0.080* | |
| H3B | 0.8534 | −0.4024 | 0.9631 | 0.080* | |
| O1 | 0.6110 (2) | 0.55328 (16) | 0.73145 (6) | 0.0812 (3) | |
| C1 | 1.1305 (2) | −0.20768 (19) | 0.95761 (7) | 0.0591 (3) | |
| C2 | 1.1216 (3) | 0.1882 (2) | 0.88465 (7) | 0.0663 (4) | |
| H2A | 1.2764 | 0.2498 | 0.8995 | 0.080* | |
| C3 | 0.9864 (3) | 0.2818 (2) | 0.84546 (7) | 0.0630 (4) | |
| C4 | 0.7501 (3) | 0.2031 (2) | 0.82202 (7) | 0.0681 (4) | |
| H4 | 0.6725 | 0.0867 | 0.8321 | 0.082* | |
| C5 | 0.6322 (3) | 0.2971 (2) | 0.78409 (8) | 0.0716 (4) | |
| H5 | 0.4761 | 0.2431 | 0.7683 | 0.086* | |
| C6 | 0.7444 (3) | 0.4721 (2) | 0.76919 (7) | 0.0677 (4) | |
| C7 | 0.9777 (3) | 0.5528 (2) | 0.79263 (7) | 0.0726 (4) | |
| H7 | 1.0536 | 0.6704 | 0.7833 | 0.087* | |
| C8 | 1.0957 (3) | 0.4563 (2) | 0.82997 (7) | 0.0698 (4) | |
| H8 | 1.2526 | 0.5100 | 0.8451 | 0.084* | |
| C9 | 0.7089 (4) | 0.7404 (2) | 0.72041 (9) | 0.0880 (5) | |
| H9A | 0.8564 | 0.7529 | 0.6983 | 0.106* | |
| H9B | 0.7432 | 0.8161 | 0.7612 | 0.106* | |
| C10 | 0.5257 (4) | 0.7986 (3) | 0.67937 (9) | 0.0890 (5) | |
| H10A | 0.3717 | 0.7624 | 0.6982 | 0.107* | |
| H10B | 0.5693 | 0.9309 | 0.6805 | 0.107* | |
| C11 | 0.5012 (4) | 0.7192 (3) | 0.60985 (8) | 0.0811 (5) | |
| H11A | 0.4523 | 0.5869 | 0.6085 | 0.097* | |
| H11B | 0.6561 | 0.7522 | 0.5913 | 0.097* | |
| C12 | 0.3221 (3) | 0.7838 (3) | 0.56889 (9) | 0.0817 (5) | |
| H12A | 0.1660 | 0.7448 | 0.5863 | 0.098* | |
| H12B | 0.3662 | 0.9164 | 0.5727 | 0.098* | |
| C13 | 0.3025 (3) | 0.7155 (2) | 0.49799 (9) | 0.0826 (5) | |
| H13A | 0.2573 | 0.5828 | 0.4940 | 0.099* | |
| H13B | 0.4583 | 0.7543 | 0.4803 | 0.099* | |
| C14 | 0.1228 (3) | 0.7824 (3) | 0.45814 (8) | 0.0810 (5) | |
| H14A | −0.0331 | 0.7420 | 0.4756 | 0.097* | |
| H14B | 0.1667 | 0.9150 | 0.4629 | 0.097* | |
| C15 | 0.1029 (4) | 0.7182 (3) | 0.38689 (9) | 0.0891 (5) | |
| H15A | 0.0562 | 0.5857 | 0.3819 | 0.107* | |
| H15B | 0.2589 | 0.7573 | 0.3693 | 0.107* | |
| C16 | −0.0752 (4) | 0.7893 (3) | 0.34816 (10) | 0.0987 (6) | |
| H16A | −0.2329 | 0.7416 | 0.3624 | 0.148* | |
| H16B | −0.0710 | 0.7509 | 0.3031 | 0.148* | |
| H16C | −0.0347 | 0.9204 | 0.3544 | 0.148* |
| S1 | 0.0526 (3) | 0.0696 (3) | 0.0871 (3) | 0.01517 (17) | −0.00582 (18) | 0.02038 (19) |
| N1 | 0.0600 (7) | 0.0703 (8) | 0.0671 (7) | 0.0211 (5) | −0.0045 (5) | 0.0120 (6) |
| N2 | 0.0551 (7) | 0.0706 (8) | 0.0817 (8) | 0.0141 (6) | −0.0097 (6) | 0.0204 (6) |
| N3 | 0.0527 (6) | 0.0681 (7) | 0.0810 (8) | 0.0158 (5) | −0.0032 (5) | 0.0155 (6) |
| O1 | 0.0863 (8) | 0.0834 (7) | 0.0823 (7) | 0.0315 (6) | −0.0029 (6) | 0.0277 (6) |
| C1 | 0.0534 (7) | 0.0639 (8) | 0.0604 (8) | 0.0158 (6) | 0.0003 (6) | 0.0060 (6) |
| C2 | 0.0666 (9) | 0.0705 (9) | 0.0627 (8) | 0.0181 (7) | −0.0032 (6) | 0.0120 (7) |
| C3 | 0.0680 (8) | 0.0687 (8) | 0.0555 (7) | 0.0224 (6) | 0.0007 (6) | 0.0090 (6) |
| C4 | 0.0709 (9) | 0.0664 (8) | 0.0691 (9) | 0.0191 (7) | 0.0004 (7) | 0.0152 (7) |
| C5 | 0.0677 (9) | 0.0792 (10) | 0.0713 (9) | 0.0228 (7) | −0.0027 (7) | 0.0159 (7) |
| C6 | 0.0774 (9) | 0.0744 (9) | 0.0587 (8) | 0.0309 (7) | 0.0027 (7) | 0.0132 (7) |
| C7 | 0.0831 (10) | 0.0666 (9) | 0.0687 (9) | 0.0177 (7) | 0.0007 (7) | 0.0153 (7) |
| C8 | 0.0712 (9) | 0.0711 (9) | 0.0662 (9) | 0.0159 (7) | −0.0042 (7) | 0.0102 (7) |
| C9 | 0.1125 (15) | 0.0781 (11) | 0.0813 (11) | 0.0368 (10) | −0.0047 (10) | 0.0185 (9) |
| C10 | 0.1121 (15) | 0.0853 (11) | 0.0837 (12) | 0.0468 (11) | 0.0025 (10) | 0.0239 (9) |
| C11 | 0.0900 (12) | 0.0816 (11) | 0.0815 (11) | 0.0349 (9) | 0.0066 (9) | 0.0225 (8) |
| C12 | 0.0882 (12) | 0.0861 (11) | 0.0802 (11) | 0.0350 (9) | 0.0053 (9) | 0.0224 (9) |
| C13 | 0.0886 (12) | 0.0810 (11) | 0.0843 (11) | 0.0299 (9) | 0.0039 (9) | 0.0174 (9) |
| C14 | 0.0875 (12) | 0.0802 (10) | 0.0797 (11) | 0.0276 (9) | 0.0040 (8) | 0.0146 (8) |
| C15 | 0.0945 (13) | 0.0900 (12) | 0.0859 (12) | 0.0307 (10) | −0.0021 (9) | 0.0068 (9) |
| C16 | 0.1001 (14) | 0.1156 (15) | 0.0842 (12) | 0.0372 (12) | −0.0079 (10) | 0.0060 (11) |
| S1—C1 | 1.6930 (15) | C9—H9A | 0.9700 |
| N1—C2 | 1.275 (2) | C9—H9B | 0.9700 |
| N1—N2 | 1.3863 (16) | C10—C11 | 1.507 (3) |
| N2—C1 | 1.341 (2) | C10—H10A | 0.9700 |
| N2—H2 | 0.8600 | C10—H10B | 0.9700 |
| N3—C1 | 1.3227 (19) | C11—C12 | 1.518 (2) |
| N3—H3A | 0.8600 | C11—H11A | 0.9700 |
| N3—H3B | 0.8600 | C11—H11B | 0.9700 |
| O1—C6 | 1.3665 (19) | C12—C13 | 1.513 (3) |
| O1—C9 | 1.432 (2) | C12—H12A | 0.9700 |
| C2—C3 | 1.453 (2) | C12—H12B | 0.9700 |
| C2—H2A | 0.9300 | C13—C14 | 1.517 (2) |
| C3—C8 | 1.387 (2) | C13—H13A | 0.9700 |
| C3—C4 | 1.402 (2) | C13—H13B | 0.9700 |
| C4—C5 | 1.377 (2) | C14—C15 | 1.512 (3) |
| C4—H4 | 0.9300 | C14—H14A | 0.9700 |
| C5—C6 | 1.390 (2) | C14—H14B | 0.9700 |
| C5—H5 | 0.9300 | C15—C16 | 1.515 (3) |
| C6—C7 | 1.389 (2) | C15—H15A | 0.9700 |
| C7—C8 | 1.383 (2) | C15—H15B | 0.9700 |
| C7—H7 | 0.9300 | C16—H16A | 0.9600 |
| C8—H8 | 0.9300 | C16—H16B | 0.9600 |
| C9—C10 | 1.511 (3) | C16—H16C | 0.9600 |
| C2—N1—N2 | 114.83 (13) | C9—C10—H10A | 108.7 |
| C1—N2—N1 | 121.23 (12) | C11—C10—H10B | 108.7 |
| C1—N2—H2 | 119.4 | C9—C10—H10B | 108.7 |
| N1—N2—H2 | 119.4 | H10A—C10—H10B | 107.6 |
| C1—N3—H3A | 120.0 | C10—C11—C12 | 113.38 (15) |
| C1—N3—H3B | 120.0 | C10—C11—H11A | 108.9 |
| H3A—N3—H3B | 120.0 | C12—C11—H11A | 108.9 |
| C6—O1—C9 | 117.89 (14) | C10—C11—H11B | 108.9 |
| N3—C1—N2 | 117.74 (13) | C12—C11—H11B | 108.9 |
| N3—C1—S1 | 123.14 (12) | H11A—C11—H11B | 107.7 |
| N2—C1—S1 | 119.09 (11) | C13—C12—C11 | 114.97 (15) |
| N1—C2—C3 | 123.26 (14) | C13—C12—H12A | 108.5 |
| N1—C2—H2A | 118.4 | C11—C12—H12A | 108.5 |
| C3—C2—H2A | 118.4 | C13—C12—H12B | 108.5 |
| C8—C3—C4 | 118.26 (14) | C11—C12—H12B | 108.5 |
| C8—C3—C2 | 118.79 (14) | H12A—C12—H12B | 107.5 |
| C4—C3—C2 | 122.94 (15) | C12—C13—C14 | 113.91 (15) |
| C5—C4—C3 | 120.37 (15) | C12—C13—H13A | 108.8 |
| C5—C4—H4 | 119.8 | C14—C13—H13A | 108.8 |
| C3—C4—H4 | 119.8 | C12—C13—H13B | 108.8 |
| C4—C5—C6 | 120.57 (15) | C14—C13—H13B | 108.8 |
| C4—C5—H5 | 119.7 | H13A—C13—H13B | 107.7 |
| C6—C5—H5 | 119.7 | C15—C14—C13 | 114.88 (16) |
| O1—C6—C7 | 124.47 (15) | C15—C14—H14A | 108.5 |
| O1—C6—C5 | 115.77 (15) | C13—C14—H14A | 108.5 |
| C7—C6—C5 | 119.76 (15) | C15—C14—H14B | 108.5 |
| C8—C7—C6 | 119.26 (15) | C13—C14—H14B | 108.5 |
| C8—C7—H7 | 120.4 | H14A—C14—H14B | 107.5 |
| C6—C7—H7 | 120.4 | C14—C15—C16 | 113.71 (16) |
| C7—C8—C3 | 121.78 (15) | C14—C15—H15A | 108.8 |
| C7—C8—H8 | 119.1 | C16—C15—H15A | 108.8 |
| C3—C8—H8 | 119.1 | C14—C15—H15B | 108.8 |
| O1—C9—C10 | 107.53 (17) | C16—C15—H15B | 108.8 |
| O1—C9—H9A | 110.2 | H15A—C15—H15B | 107.7 |
| C10—C9—H9A | 110.2 | C15—C16—H16A | 109.5 |
| O1—C9—H9B | 110.2 | C15—C16—H16B | 109.5 |
| C10—C9—H9B | 110.2 | H16A—C16—H16B | 109.5 |
| H9A—C9—H9B | 108.5 | C15—C16—H16C | 109.5 |
| C11—C10—C9 | 114.12 (15) | H16A—C16—H16C | 109.5 |
| C11—C10—H10A | 108.7 | H16B—C16—H16C | 109.5 |
| C2—N1—N2—C1 | 175.56 (13) | O1—C6—C7—C8 | −179.39 (14) |
| N1—N2—C1—N3 | −4.3 (2) | C5—C6—C7—C8 | 0.7 (2) |
| N1—N2—C1—S1 | 174.08 (10) | C6—C7—C8—C3 | −0.9 (2) |
| N2—N1—C2—C3 | 177.06 (12) | C4—C3—C8—C7 | 0.2 (2) |
| N1—C2—C3—C8 | −177.92 (14) | C2—C3—C8—C7 | 179.72 (13) |
| N1—C2—C3—C4 | 1.6 (2) | C6—O1—C9—C10 | −178.39 (13) |
| C8—C3—C4—C5 | 0.7 (2) | O1—C9—C10—C11 | −73.0 (2) |
| C2—C3—C4—C5 | −178.83 (13) | C9—C10—C11—C12 | −178.21 (16) |
| C3—C4—C5—C6 | −0.8 (2) | C10—C11—C12—C13 | 176.73 (17) |
| C9—O1—C6—C7 | −6.4 (2) | C11—C12—C13—C14 | −179.85 (15) |
| C9—O1—C6—C5 | 173.52 (14) | C12—C13—C14—C15 | 179.08 (16) |
| C4—C5—C6—O1 | −179.76 (13) | C13—C14—C15—C16 | −179.20 (17) |
| C4—C5—C6—C7 | 0.1 (2) |