| Literature DB >> 21580058 |
Angela Winstead, Krystal Hart, Yousef M Hijji, Jerry P Jasinski, Ray J Butcher.
Abstract
In the title compound, C(17)H(24)NO(2) (+)·Br(-)·H(2)O, the pentyl group chain in the cation extends nearly perpendicular [N-C-C-C = -64.4 (3)°] to the mean plane of the indole ring with the carboxyl end group twisted such that the dihedral angle between the mean planes of the indole and carb-oxy groups measures 43.2 (4)°. Both ions in the salt form inter-molecular hydrogen bonds (O-H⋯Br and O-H⋯O) with the water mol-ecule. As a result of the Br⋯H-O-H⋯Br inter-actions, a zigzag chain is formed in the c-axis direction. The crystal packing is influenced by the collective action of the O-H⋯O and O-H⋯Br inter-molecular inter-actions as well as π-π stacking inter-molecular inter-actions between adjacent benzyl rings of the indole group [centroid-centroid distance = 3.721 (13) Å] and inter-molecular C-H⋯π inter-actions between a methyl hydrogen and the benzyl ring of the indole group. The O-H⋯Br inter-actions form a distorted tetra-hedral array about the central Br atom. A MOPAC AM1 calculation provides support to these observations.Entities:
Year: 2009 PMID: 21580058 PMCID: PMC2980276 DOI: 10.1107/S1600536809049204
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C17H24NO2+·Br−·H2O | |
| Monoclinic, | Cu |
| Hall symbol: -P 2ybc | Cell parameters from 8515 reflections |
| θ = 5.6–73.5° | |
| µ = 3.27 mm−1 | |
| β = 99.437 (2)° | Needle, colorless |
| 0.55 × 0.18 × 0.12 mm | |
| Oxford Diffraction Gemini R diffractometer | 3504 independent reflections |
| Radiation source: fine-focus sealed tube | 3049 reflections with |
| graphite | |
| Detector resolution: 10.5081 pixels mm-1 | θmax = 73.7°, θmin = 5.8° |
| φ and ω scans | |
| Absorption correction: multi-scan ( | |
| 13155 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3504 reflections | (Δ/σ)max = 0.001 |
| 209 parameters | Δρmax = 0.52 e Å−3 |
| 3 restraints | Δρmin = −0.43 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Br | 0.168343 (18) | 0.871933 (16) | 0.50535 (3) | 0.03689 (11) | |
| O1 | 0.5587 (2) | 0.7918 (2) | 0.1347 (5) | 0.0893 (10) | |
| O2 | 0.42824 (18) | 0.81569 (14) | 0.2331 (4) | 0.0661 (7) | |
| H2O | 0.3800 | 0.7873 | 0.2448 | 0.079* | |
| O1W | 0.28626 (17) | 0.7310 (2) | 0.3254 (3) | 0.0707 (8) | |
| H1W1 | 0.254 (3) | 0.764 (3) | 0.372 (5) | 0.106* | |
| H1W2 | 0.251 (3) | 0.714 (3) | 0.242 (4) | 0.106* | |
| N1 | 0.79026 (13) | 0.52889 (12) | 0.5047 (2) | 0.0254 (4) | |
| C1 | 0.76946 (16) | 0.56100 (15) | 0.6432 (3) | 0.0279 (5) | |
| C2 | 0.68861 (18) | 0.53476 (18) | 0.7221 (3) | 0.0379 (6) | |
| H2A | 0.6566 | 0.4853 | 0.6607 | 0.057* | |
| H2B | 0.6449 | 0.5838 | 0.7192 | 0.057* | |
| H2C | 0.7106 | 0.5178 | 0.8389 | 0.057* | |
| C3 | 0.84000 (16) | 0.63015 (14) | 0.7139 (3) | 0.0268 (5) | |
| C4 | 0.78975 (19) | 0.71914 (16) | 0.7114 (3) | 0.0367 (6) | |
| H4A | 0.7579 | 0.7317 | 0.5972 | 0.055* | |
| H4B | 0.8359 | 0.7649 | 0.7478 | 0.055* | |
| H4C | 0.7435 | 0.7173 | 0.7875 | 0.055* | |
| C5 | 0.88798 (19) | 0.60805 (17) | 0.8929 (3) | 0.0348 (5) | |
| H5A | 0.9155 | 0.5496 | 0.8944 | 0.052* | |
| H5B | 0.8416 | 0.6097 | 0.9687 | 0.052* | |
| H5C | 0.9375 | 0.6508 | 0.9297 | 0.052* | |
| C6 | 0.90648 (16) | 0.62789 (13) | 0.5885 (3) | 0.0252 (4) | |
| C7 | 0.98805 (16) | 0.67357 (15) | 0.5803 (3) | 0.0301 (5) | |
| H7A | 1.0118 | 0.7148 | 0.6643 | 0.036* | |
| C8 | 1.03446 (17) | 0.65748 (16) | 0.4452 (3) | 0.0327 (5) | |
| H8A | 1.0904 | 0.6886 | 0.4369 | 0.039* | |
| C9 | 1.00061 (17) | 0.59686 (16) | 0.3225 (3) | 0.0318 (5) | |
| H9A | 1.0338 | 0.5873 | 0.2319 | 0.038* | |
| C10 | 0.91882 (16) | 0.54979 (15) | 0.3296 (3) | 0.0281 (5) | |
| H10A | 0.8952 | 0.5078 | 0.2470 | 0.034* | |
| C11 | 0.87436 (15) | 0.56811 (14) | 0.4644 (3) | 0.0246 (4) | |
| C12 | 0.73635 (17) | 0.46508 (15) | 0.3907 (3) | 0.0320 (5) | |
| H12A | 0.6940 | 0.4319 | 0.4522 | 0.038* | |
| H12B | 0.7800 | 0.4232 | 0.3508 | 0.038* | |
| C13 | 0.67861 (17) | 0.51091 (16) | 0.2403 (3) | 0.0339 (5) | |
| H13A | 0.7215 | 0.5454 | 0.1823 | 0.041* | |
| H13B | 0.6488 | 0.4661 | 0.1607 | 0.041* | |
| C14 | 0.60247 (18) | 0.57112 (19) | 0.2847 (3) | 0.0391 (6) | |
| H14A | 0.5631 | 0.5384 | 0.3527 | 0.047* | |
| H14B | 0.6323 | 0.6199 | 0.3540 | 0.047* | |
| C15 | 0.5405 (2) | 0.6079 (2) | 0.1308 (4) | 0.0553 (8) | |
| H15A | 0.5107 | 0.5590 | 0.0617 | 0.066* | |
| H15B | 0.5800 | 0.6403 | 0.0628 | 0.066* | |
| C16 | 0.46391 (19) | 0.66849 (18) | 0.1732 (4) | 0.0430 (6) | |
| H16A | 0.4067 | 0.6601 | 0.0888 | 0.052* | |
| H16B | 0.4486 | 0.6516 | 0.2838 | 0.052* | |
| C17 | 0.4896 (2) | 0.7628 (2) | 0.1783 (4) | 0.0492 (7) |
| Br | 0.04080 (17) | 0.03133 (16) | 0.03975 (18) | −0.00006 (10) | 0.01018 (12) | 0.00063 (10) |
| O1 | 0.0628 (16) | 0.0726 (18) | 0.136 (3) | −0.0271 (14) | 0.0274 (17) | −0.0028 (18) |
| O2 | 0.0607 (14) | 0.0372 (11) | 0.097 (2) | 0.0081 (10) | 0.0028 (13) | −0.0153 (12) |
| O1W | 0.0458 (12) | 0.102 (2) | 0.0635 (16) | 0.0124 (13) | 0.0056 (11) | −0.0374 (15) |
| N1 | 0.0266 (9) | 0.0221 (8) | 0.0263 (10) | −0.0014 (7) | 0.0009 (7) | 0.0013 (7) |
| C1 | 0.0300 (11) | 0.0264 (11) | 0.0259 (11) | 0.0015 (9) | 0.0005 (9) | 0.0053 (9) |
| C2 | 0.0355 (13) | 0.0415 (14) | 0.0380 (14) | −0.0016 (10) | 0.0105 (11) | 0.0069 (11) |
| C3 | 0.0325 (11) | 0.0237 (11) | 0.0238 (11) | −0.0012 (8) | 0.0033 (9) | −0.0004 (8) |
| C4 | 0.0450 (14) | 0.0296 (12) | 0.0366 (14) | 0.0056 (10) | 0.0100 (11) | −0.0002 (10) |
| C5 | 0.0439 (14) | 0.0343 (12) | 0.0244 (12) | −0.0008 (10) | 0.0004 (10) | 0.0014 (10) |
| C6 | 0.0317 (11) | 0.0205 (10) | 0.0225 (11) | 0.0018 (8) | 0.0015 (9) | 0.0015 (8) |
| C7 | 0.0334 (11) | 0.0232 (11) | 0.0319 (13) | −0.0025 (9) | 0.0003 (9) | 0.0005 (9) |
| C8 | 0.0302 (11) | 0.0282 (11) | 0.0394 (14) | −0.0014 (9) | 0.0051 (10) | 0.0082 (10) |
| C9 | 0.0348 (12) | 0.0313 (12) | 0.0306 (13) | 0.0075 (9) | 0.0089 (10) | 0.0065 (10) |
| C10 | 0.0347 (12) | 0.0244 (11) | 0.0239 (11) | 0.0050 (9) | 0.0010 (9) | 0.0006 (9) |
| C11 | 0.0275 (10) | 0.0210 (10) | 0.0243 (11) | 0.0008 (8) | 0.0015 (8) | 0.0045 (8) |
| C12 | 0.0327 (11) | 0.0234 (11) | 0.0374 (13) | −0.0030 (9) | −0.0020 (10) | −0.0040 (10) |
| C13 | 0.0330 (12) | 0.0330 (12) | 0.0332 (13) | 0.0007 (9) | −0.0018 (10) | −0.0069 (10) |
| C14 | 0.0352 (13) | 0.0426 (14) | 0.0381 (14) | 0.0067 (11) | 0.0023 (11) | −0.0017 (11) |
| C15 | 0.0538 (18) | 0.0570 (18) | 0.0493 (18) | 0.0244 (15) | −0.0087 (14) | −0.0133 (15) |
| C16 | 0.0363 (13) | 0.0373 (14) | 0.0526 (17) | 0.0073 (11) | −0.0014 (12) | −0.0026 (12) |
| C17 | 0.0405 (15) | 0.0418 (15) | 0.062 (2) | −0.0031 (12) | −0.0019 (13) | −0.0028 (14) |
| O1—C17 | 1.198 (4) | C7—C8 | 1.394 (4) |
| O2—C17 | 1.330 (4) | C7—H7A | 0.9500 |
| O2—H2O | 0.8400 | C8—C9 | 1.389 (4) |
| O1W—H1W1 | 0.812 (19) | C8—H8A | 0.9500 |
| O1W—H1W2 | 0.817 (19) | C9—C10 | 1.394 (3) |
| N1—C1 | 1.302 (3) | C9—H9A | 0.9500 |
| N1—C11 | 1.440 (3) | C10—C11 | 1.381 (3) |
| N1—C12 | 1.476 (3) | C10—H10A | 0.9500 |
| C1—C2 | 1.476 (3) | C12—C13 | 1.528 (3) |
| C1—C3 | 1.516 (3) | C12—H12A | 0.9900 |
| C2—H2A | 0.9800 | C12—H12B | 0.9900 |
| C2—H2B | 0.9800 | C13—C14 | 1.524 (3) |
| C2—H2C | 0.9800 | C13—H13A | 0.9900 |
| C3—C6 | 1.507 (3) | C13—H13B | 0.9900 |
| C3—C5 | 1.536 (3) | C14—C15 | 1.518 (4) |
| C3—C4 | 1.545 (3) | C14—H14A | 0.9900 |
| C4—H4A | 0.9800 | C14—H14B | 0.9900 |
| C4—H4B | 0.9800 | C15—C16 | 1.526 (4) |
| C4—H4C | 0.9800 | C15—H15A | 0.9900 |
| C5—H5A | 0.9800 | C15—H15B | 0.9900 |
| C5—H5B | 0.9800 | C16—C17 | 1.493 (4) |
| C5—H5C | 0.9800 | C16—H16A | 0.9900 |
| C6—C11 | 1.382 (3) | C16—H16B | 0.9900 |
| C6—C7 | 1.382 (3) | ||
| C17—O2—H2O | 109.5 | C8—C9—H9A | 119.4 |
| H1W1—O1W—H1W2 | 104 (3) | C10—C9—H9A | 119.4 |
| C1—N1—C11 | 111.00 (19) | C11—C10—C9 | 115.8 (2) |
| C1—N1—C12 | 127.9 (2) | C11—C10—H10A | 122.1 |
| C11—N1—C12 | 120.96 (19) | C9—C10—H10A | 122.1 |
| N1—C1—C2 | 125.4 (2) | C10—C11—C6 | 124.3 (2) |
| N1—C1—C3 | 110.6 (2) | C10—C11—N1 | 127.7 (2) |
| C2—C1—C3 | 124.0 (2) | C6—C11—N1 | 108.0 (2) |
| C1—C2—H2A | 109.5 | N1—C12—C13 | 110.80 (19) |
| C1—C2—H2B | 109.5 | N1—C12—H12A | 109.5 |
| H2A—C2—H2B | 109.5 | C13—C12—H12A | 109.5 |
| C1—C2—H2C | 109.5 | N1—C12—H12B | 109.5 |
| H2A—C2—H2C | 109.5 | C13—C12—H12B | 109.5 |
| H2B—C2—H2C | 109.5 | H12A—C12—H12B | 108.1 |
| C6—C3—C1 | 101.18 (18) | C14—C13—C12 | 114.4 (2) |
| C6—C3—C5 | 112.9 (2) | C14—C13—H13A | 108.7 |
| C1—C3—C5 | 111.86 (19) | C12—C13—H13A | 108.7 |
| C6—C3—C4 | 111.20 (19) | C14—C13—H13B | 108.7 |
| C1—C3—C4 | 109.1 (2) | C12—C13—H13B | 108.7 |
| C5—C3—C4 | 110.3 (2) | H13A—C13—H13B | 107.6 |
| C3—C4—H4A | 109.5 | C15—C14—C13 | 112.6 (2) |
| C3—C4—H4B | 109.5 | C15—C14—H14A | 109.1 |
| H4A—C4—H4B | 109.5 | C13—C14—H14A | 109.1 |
| C3—C4—H4C | 109.5 | C15—C14—H14B | 109.1 |
| H4A—C4—H4C | 109.5 | C13—C14—H14B | 109.1 |
| H4B—C4—H4C | 109.5 | H14A—C14—H14B | 107.8 |
| C3—C5—H5A | 109.5 | C14—C15—C16 | 113.2 (3) |
| C3—C5—H5B | 109.5 | C14—C15—H15A | 108.9 |
| H5A—C5—H5B | 109.5 | C16—C15—H15A | 108.9 |
| C3—C5—H5C | 109.5 | C14—C15—H15B | 108.9 |
| H5A—C5—H5C | 109.5 | C16—C15—H15B | 108.9 |
| H5B—C5—H5C | 109.5 | H15A—C15—H15B | 107.7 |
| C11—C6—C7 | 119.3 (2) | C17—C16—C15 | 114.2 (3) |
| C11—C6—C3 | 109.15 (19) | C17—C16—H16A | 108.7 |
| C7—C6—C3 | 131.6 (2) | C15—C16—H16A | 108.7 |
| C6—C7—C8 | 118.1 (2) | C17—C16—H16B | 108.7 |
| C6—C7—H7A | 120.9 | C15—C16—H16B | 108.7 |
| C8—C7—H7A | 120.9 | H16A—C16—H16B | 107.6 |
| C9—C8—C7 | 121.3 (2) | O1—C17—O2 | 120.4 (3) |
| C9—C8—H8A | 119.4 | O1—C17—C16 | 124.5 (3) |
| C7—C8—H8A | 119.4 | O2—C17—C16 | 115.1 (3) |
| C8—C9—C10 | 121.3 (2) | ||
| C11—N1—C1—C2 | −179.2 (2) | C8—C9—C10—C11 | 0.5 (3) |
| C12—N1—C1—C2 | 4.5 (4) | C9—C10—C11—C6 | −0.7 (3) |
| C11—N1—C1—C3 | 1.0 (2) | C9—C10—C11—N1 | −179.0 (2) |
| C12—N1—C1—C3 | −175.3 (2) | C7—C6—C11—C10 | 0.2 (3) |
| N1—C1—C3—C6 | −1.7 (2) | C3—C6—C11—C10 | −180.0 (2) |
| C2—C1—C3—C6 | 178.4 (2) | C7—C6—C11—N1 | 178.82 (19) |
| N1—C1—C3—C5 | −122.2 (2) | C3—C6—C11—N1 | −1.4 (2) |
| C2—C1—C3—C5 | 58.0 (3) | C1—N1—C11—C10 | 178.8 (2) |
| N1—C1—C3—C4 | 115.6 (2) | C12—N1—C11—C10 | −4.6 (3) |
| C2—C1—C3—C4 | −64.3 (3) | C1—N1—C11—C6 | 0.3 (2) |
| C1—C3—C6—C11 | 1.9 (2) | C12—N1—C11—C6 | 176.90 (19) |
| C5—C3—C6—C11 | 121.6 (2) | C1—N1—C12—C13 | 99.2 (3) |
| C4—C3—C6—C11 | −113.9 (2) | C11—N1—C12—C13 | −76.8 (3) |
| C1—C3—C6—C7 | −178.4 (2) | N1—C12—C13—C14 | −64.4 (3) |
| C5—C3—C6—C7 | −58.7 (3) | C12—C13—C14—C15 | −174.0 (2) |
| C4—C3—C6—C7 | 65.8 (3) | C13—C14—C15—C16 | −179.9 (3) |
| C11—C6—C7—C8 | 0.4 (3) | C14—C15—C16—C17 | 94.4 (4) |
| C3—C6—C7—C8 | −179.3 (2) | C15—C16—C17—O1 | 8.5 (5) |
| C6—C7—C8—C9 | −0.5 (4) | C15—C16—C17—O2 | −172.8 (3) |
| C7—C8—C9—C10 | 0.0 (4) |
| H··· | ||||
| O2—H2O···O1W | 0.84 | 1.82 | 2.637 (4) | 166 |
| O1W—H1W1···Br | 0.81 (2) | 2.43 (2) | 3.240 (2) | 175 (5) |
| O1W—H1W2···Bri | 0.82 (2) | 2.47 (2) | 3.262 (3) | 165 (5) |
| C4—H4B···Cg2ii | 0.99 | 2.88 | 3.828 (3) | 162 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O2—H2 | 0.84 | 1.82 | 2.637 (4) | 166 |
| O1 | 0.812 (19) | 2.431 (19) | 3.240 (2) | 175 (5) |
| O1 | 0.817 (19) | 2.47 (2) | 3.262 (3) | 165 (5) |
| C4—H4 | 0.99 | 2.88 | 3.828 (3) | 162 |
Symmetry code: (i) ; (ii) . Cg2 is the centroid of the C6–C11 ring.