| Literature DB >> 21579964 |
Kwang Ha1.
Abstract
In the title complex, [PdBr(2)(C(12)H(8)N(2))], the Pd(II) ion is four-coordinated in a slightly distorted square-planar environment by two N atoms of the chelating 1,10-phenanthroline ligand and two bromide ions. The complex displays numerous inter-molecular π-π inter-actions between adjacent six-membered rings, the shortest centroid-centroid distance being 3.680 (4) Å. The nearly planar [maximum deviation 0.143 (2) Å] mol-ecules stack in columns parallel to (101) with a Pd⋯Pd distance of 4.8466 (9) Å.Entities:
Year: 2009 PMID: 21579964 PMCID: PMC2980023 DOI: 10.1107/S160053680905168X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [PdBr2(C12H8N2)] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 1837 reflections |
| θ = 2.3–28.2° | |
| µ = 8.26 mm−1 | |
| β = 109.106 (1)° | Needle, yellow |
| 0.22 × 0.06 × 0.04 mm | |
| Bruker SMART 1000 CCD diffractometer | 2933 independent reflections |
| Radiation source: fine-focus sealed tube | 1729 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.2° |
| Absorption correction: multi-scan ( | |
| 8695 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2933 reflections | (Δ/σ)max < 0.001 |
| 154 parameters | Δρmax = 1.37 e Å−3 |
| 0 restraints | Δρmin = −1.54 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Pd1 | 0.70926 (6) | 0.34181 (3) | −0.10593 (9) | 0.02059 (16) | |
| Br1 | 0.74510 (9) | 0.47817 (4) | −0.08022 (13) | 0.0299 (2) | |
| Br2 | 0.46176 (9) | 0.36087 (5) | −0.29008 (13) | 0.0352 (2) | |
| N1 | 0.6966 (7) | 0.2243 (3) | −0.1180 (9) | 0.0251 (15) | |
| N2 | 0.9155 (6) | 0.3173 (3) | 0.0591 (8) | 0.0172 (13) | |
| C1 | 0.5885 (8) | 0.1797 (4) | −0.2101 (11) | 0.0285 (19) | |
| H1 | 0.5012 | 0.2027 | −0.2859 | 0.034* | |
| C2 | 0.5963 (10) | 0.1002 (4) | −0.2012 (12) | 0.036 (2) | |
| H2 | 0.5169 | 0.0698 | −0.2723 | 0.043* | |
| C3 | 0.7203 (9) | 0.0668 (4) | −0.0885 (12) | 0.033 (2) | |
| H3 | 0.7257 | 0.0127 | −0.0787 | 0.040* | |
| C4 | 0.8411 (9) | 0.1110 (4) | 0.0142 (12) | 0.0251 (19) | |
| C5 | 0.9779 (9) | 0.0822 (4) | 0.1358 (12) | 0.032 (2) | |
| H5 | 0.9912 | 0.0286 | 0.1554 | 0.039* | |
| C6 | 1.0848 (9) | 0.1291 (4) | 0.2199 (11) | 0.0277 (19) | |
| H6 | 1.1740 | 0.1079 | 0.2954 | 0.033* | |
| C7 | 1.0718 (8) | 0.2103 (4) | 0.2022 (11) | 0.0217 (17) | |
| C8 | 1.1806 (8) | 0.2624 (4) | 0.2872 (11) | 0.0249 (18) | |
| H8 | 1.2718 | 0.2449 | 0.3664 | 0.030* | |
| C9 | 1.1558 (8) | 0.3383 (4) | 0.2568 (12) | 0.0297 (19) | |
| H9 | 1.2298 | 0.3739 | 0.3152 | 0.036* | |
| C10 | 1.0228 (8) | 0.3643 (4) | 0.1406 (11) | 0.0226 (18) | |
| H10 | 1.0085 | 0.4177 | 0.1190 | 0.027* | |
| C11 | 0.9395 (7) | 0.2402 (4) | 0.0878 (10) | 0.0167 (16) | |
| C12 | 0.8238 (8) | 0.1901 (4) | −0.0051 (10) | 0.0188 (17) |
| Pd1 | 0.0183 (3) | 0.0196 (3) | 0.0226 (3) | −0.0008 (3) | 0.0051 (2) | 0.0000 (3) |
| Br1 | 0.0289 (5) | 0.0197 (4) | 0.0388 (5) | 0.0016 (4) | 0.0078 (4) | 0.0009 (4) |
| Br2 | 0.0193 (4) | 0.0391 (5) | 0.0408 (6) | 0.0006 (4) | 0.0013 (4) | 0.0039 (4) |
| N1 | 0.026 (4) | 0.026 (3) | 0.026 (4) | −0.005 (3) | 0.012 (3) | 0.001 (3) |
| N2 | 0.014 (3) | 0.016 (3) | 0.018 (3) | −0.003 (3) | −0.001 (3) | 0.001 (3) |
| C1 | 0.015 (4) | 0.039 (5) | 0.027 (5) | −0.007 (4) | 0.001 (3) | −0.005 (4) |
| C2 | 0.046 (6) | 0.032 (5) | 0.029 (5) | −0.014 (5) | 0.011 (4) | −0.008 (4) |
| C3 | 0.053 (6) | 0.021 (4) | 0.034 (5) | −0.010 (4) | 0.024 (5) | −0.008 (4) |
| C4 | 0.038 (5) | 0.014 (4) | 0.030 (5) | −0.009 (4) | 0.020 (4) | −0.003 (3) |
| C5 | 0.047 (6) | 0.015 (4) | 0.042 (6) | 0.013 (4) | 0.025 (5) | 0.011 (4) |
| C6 | 0.032 (5) | 0.028 (4) | 0.026 (5) | 0.007 (4) | 0.012 (4) | 0.011 (4) |
| C7 | 0.023 (4) | 0.025 (4) | 0.022 (4) | 0.008 (4) | 0.014 (4) | 0.004 (4) |
| C8 | 0.014 (4) | 0.033 (5) | 0.024 (5) | 0.005 (4) | 0.001 (3) | 0.004 (4) |
| C9 | 0.025 (5) | 0.025 (4) | 0.036 (5) | 0.000 (4) | 0.006 (4) | 0.002 (4) |
| C10 | 0.024 (5) | 0.019 (4) | 0.026 (5) | −0.005 (3) | 0.009 (4) | 0.004 (3) |
| C11 | 0.012 (4) | 0.025 (4) | 0.016 (4) | −0.004 (3) | 0.009 (3) | 0.000 (3) |
| C12 | 0.020 (4) | 0.018 (4) | 0.018 (4) | 0.000 (3) | 0.007 (3) | 0.001 (3) |
| Pd1—N1 | 2.059 (6) | C4—C12 | 1.395 (9) |
| Pd1—N2 | 2.048 (6) | C4—C5 | 1.445 (11) |
| Pd1—Br1 | 2.4095 (9) | C5—C6 | 1.321 (10) |
| Pd1—Br2 | 2.4016 (10) | C5—H5 | 0.9500 |
| N1—C1 | 1.317 (9) | C6—C7 | 1.428 (9) |
| N1—C12 | 1.394 (9) | C6—H6 | 0.9500 |
| N2—C10 | 1.321 (8) | C7—C8 | 1.392 (10) |
| N2—C11 | 1.373 (8) | C7—C11 | 1.404 (10) |
| C1—C2 | 1.392 (10) | C8—C9 | 1.355 (9) |
| C1—H1 | 0.9500 | C8—H8 | 0.9500 |
| C2—C3 | 1.365 (11) | C9—C10 | 1.388 (10) |
| C2—H2 | 0.9500 | C9—H9 | 0.9500 |
| C3—C4 | 1.414 (11) | C10—H10 | 0.9500 |
| C3—H3 | 0.9500 | C11—C12 | 1.426 (9) |
| N2—Pd1—N1 | 81.5 (2) | C6—C5—C4 | 121.0 (7) |
| N2—Pd1—Br2 | 175.30 (15) | C6—C5—H5 | 119.5 |
| N1—Pd1—Br2 | 94.47 (19) | C4—C5—H5 | 119.5 |
| N2—Pd1—Br1 | 93.91 (15) | C5—C6—C7 | 122.8 (8) |
| N1—Pd1—Br1 | 175.29 (19) | C5—C6—H6 | 118.6 |
| Br2—Pd1—Br1 | 90.20 (3) | C7—C6—H6 | 118.6 |
| C1—N1—C12 | 118.2 (6) | C8—C7—C11 | 117.1 (6) |
| C1—N1—Pd1 | 129.9 (6) | C8—C7—C6 | 125.3 (7) |
| C12—N1—Pd1 | 111.9 (5) | C11—C7—C6 | 117.6 (8) |
| C10—N2—C11 | 118.0 (6) | C9—C8—C7 | 119.8 (7) |
| C10—N2—Pd1 | 129.4 (5) | C9—C8—H8 | 120.1 |
| C11—N2—Pd1 | 112.6 (4) | C7—C8—H8 | 120.1 |
| N1—C1—C2 | 123.0 (8) | C8—C9—C10 | 120.4 (8) |
| N1—C1—H1 | 118.5 | C8—C9—H9 | 119.8 |
| C2—C1—H1 | 118.5 | C10—C9—H9 | 119.8 |
| C3—C2—C1 | 118.7 (8) | N2—C10—C9 | 122.2 (7) |
| C3—C2—H2 | 120.6 | N2—C10—H10 | 118.9 |
| C1—C2—H2 | 120.6 | C9—C10—H10 | 118.9 |
| C2—C3—C4 | 121.5 (7) | N2—C11—C7 | 122.5 (7) |
| C2—C3—H3 | 119.3 | N2—C11—C12 | 117.3 (6) |
| C4—C3—H3 | 119.3 | C7—C11—C12 | 120.1 (7) |
| C12—C4—C3 | 115.7 (8) | N1—C12—C4 | 122.8 (7) |
| C12—C4—C5 | 117.9 (7) | N1—C12—C11 | 116.6 (6) |
| C3—C4—C5 | 126.4 (7) | C4—C12—C11 | 120.6 (7) |
| N2—Pd1—N1—C1 | −178.2 (7) | Pd1—N2—C10—C9 | 176.9 (5) |
| Br2—Pd1—N1—C1 | 4.2 (6) | C8—C9—C10—N2 | 1.3 (11) |
| N2—Pd1—N1—C12 | 3.5 (5) | C10—N2—C11—C7 | 1.2 (9) |
| Br2—Pd1—N1—C12 | −174.1 (4) | Pd1—N2—C11—C7 | −177.7 (5) |
| N1—Pd1—N2—C10 | 177.9 (6) | C10—N2—C11—C12 | −178.5 (6) |
| Br1—Pd1—N2—C10 | −1.2 (6) | Pd1—N2—C11—C12 | 2.6 (7) |
| N1—Pd1—N2—C11 | −3.4 (5) | C8—C7—C11—N2 | −0.2 (10) |
| Br1—Pd1—N2—C11 | 177.5 (4) | C6—C7—C11—N2 | −179.3 (6) |
| C12—N1—C1—C2 | −0.7 (11) | C8—C7—C11—C12 | 179.5 (6) |
| Pd1—N1—C1—C2 | −178.9 (5) | C6—C7—C11—C12 | 0.3 (10) |
| N1—C1—C2—C3 | 1.6 (12) | C1—N1—C12—C4 | 0.0 (10) |
| C1—C2—C3—C4 | −1.7 (12) | Pd1—N1—C12—C4 | 178.5 (5) |
| C2—C3—C4—C12 | 1.0 (11) | C1—N1—C12—C11 | 178.3 (6) |
| C2—C3—C4—C5 | −179.3 (7) | Pd1—N1—C12—C11 | −3.2 (7) |
| C12—C4—C5—C6 | −2.5 (11) | C3—C4—C12—N1 | −0.1 (10) |
| C3—C4—C5—C6 | 177.8 (7) | C5—C4—C12—N1 | −179.8 (6) |
| C4—C5—C6—C7 | 2.0 (11) | C3—C4—C12—C11 | −178.3 (6) |
| C5—C6—C7—C8 | −179.9 (7) | C5—C4—C12—C11 | 2.0 (10) |
| C5—C6—C7—C11 | −0.9 (11) | N2—C11—C12—N1 | 0.4 (9) |
| C11—C7—C8—C9 | −0.3 (10) | C7—C11—C12—N1 | −179.2 (6) |
| C6—C7—C8—C9 | 178.8 (7) | N2—C11—C12—C4 | 178.7 (6) |
| C7—C8—C9—C10 | −0.3 (11) | C7—C11—C12—C4 | −0.9 (10) |
| C11—N2—C10—C9 | −1.8 (10) |
Selected bond lengths (Å)
| Pd1—N1 | 2.059 (6) |
| Pd1—N2 | 2.048 (6) |
| Pd1—Br1 | 2.4095 (9) |
| Pd1—Br2 | 2.4016 (10) |