Literature DB >> 21579882

3-(4-Fluoro-phenyl-sulfin-yl)-2,5,7-trimethyl-1-benzofuran.

Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.   

Abstract

In the title mol-ecule, C(17)H(15)FO(2)S, the O atom and the 4-fluoro-phenyl group of the 4-fluoro-phenyl-sulfinyl substituent lie on opposite sides of the benzofuran fragment. The mean planes of the benzofuran and 4-fluoro-phenyl fragments form a dihedral angle of 86.07 (4)°. In the crystal structure, weak inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into centrosymmetric dimers, which are further linked via inter-molecular C-H⋯π inter-actions.

Entities:  

Year:  2010        PMID: 21579882      PMCID: PMC2979946          DOI: 10.1107/S160053681000293X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of similar 2-methyl-3-phenyl­sulfinyl-1-benzofuran derivatives, see: Choi et al. (2007 ▶, 2008 ▶). For the biological activity of benzofuran compounds, see: Aslam et al. (2006 ▶); Galal et al. (2009 ▶); Khan et al. (2005 ▶). For natural products with benzofuran rings, see: Akgul & Anil (2003 ▶); Soekamto et al. (2003 ▶).

Experimental

Crystal data

C17H15FO2S M = 302.35 Triclinic, a = 6.2558 (2) Å b = 11.1848 (3) Å c = 11.9766 (5) Å α = 110.355 (2)° β = 99.448 (2)° γ = 104.130 (1)° V = 732.75 (4) Å3 Z = 2 Mo Kα radiation μ = 0.23 mm−1 T = 172 K 0.43 × 0.28 × 0.26 mm

Data collection

Bruker SMART APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▶) T min = 0.681, T max = 0.746 12781 measured reflections 3350 independent reflections 3071 reflections with I > 2σ(I) R int = 0.026

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.102 S = 1.03 3350 reflections 193 parameters H-atom parameters constrained Δρmax = 0.27 e Å−3 Δρmin = −0.37 e Å−3 Data collection: APEX2 (Bruker, 2009 ▶); cell refinement: SAINT (Bruker, 2009 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S160053681000293X/cv2691sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053681000293X/cv2691Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15FO2SZ = 2
Mr = 302.35F(000) = 316
Triclinic, P1Dx = 1.370 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 6.2558 (2) ÅCell parameters from 9234 reflections
b = 11.1848 (3) Åθ = 3.3–27.5°
c = 11.9766 (5) ŵ = 0.23 mm1
α = 110.355 (2)°T = 172 K
β = 99.448 (2)°Block, colourless
γ = 104.130 (1)°0.43 × 0.28 × 0.26 mm
V = 732.75 (4) Å3
Bruker SMART APEXII CCD diffractometer3350 independent reflections
Radiation source: Rotating Anode3071 reflections with I > 2σ(I)
Bruker HELIOS graded multilayer opticsRint = 0.026
Detector resolution: 10.0 pixels mm-1θmax = 27.5°, θmin = 1.9°
φ and ω scansh = −8→8
Absorption correction: multi-scan (SADABS; Bruker, 2009)k = −14→14
Tmin = 0.681, Tmax = 0.746l = −15→15
12781 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: difference Fourier map
wR(F2) = 0.102H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0539P)2 + 0.3002P] where P = (Fo2 + 2Fc2)/3
3350 reflections(Δ/σ)max < 0.001
193 parametersΔρmax = 0.27 e Å3
0 restraintsΔρmin = −0.37 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S0.61072 (6)0.50406 (3)0.83633 (3)0.02837 (11)
F0.28727 (19)0.04833 (10)0.97162 (10)0.0498 (3)
O10.23445 (16)0.38938 (10)0.49810 (8)0.0282 (2)
O20.86249 (18)0.53145 (12)0.85499 (10)0.0409 (3)
C10.4760 (2)0.42813 (13)0.67695 (12)0.0262 (3)
C20.5133 (2)0.32114 (13)0.58028 (12)0.0265 (3)
C30.6563 (3)0.24226 (15)0.57323 (14)0.0329 (3)
H30.76440.25460.64540.040*
C40.6370 (3)0.14528 (15)0.45835 (16)0.0380 (3)
C50.4753 (3)0.12862 (15)0.35294 (15)0.0391 (4)
H50.46390.06080.27550.047*
C60.3315 (3)0.20587 (14)0.35596 (13)0.0337 (3)
C70.3589 (2)0.30150 (13)0.47270 (12)0.0273 (3)
C80.3107 (2)0.46565 (13)0.62320 (11)0.0261 (3)
C90.7900 (3)0.05875 (18)0.4476 (2)0.0522 (5)
H9A0.93550.10560.43790.078*
H9B0.7145−0.02710.37540.078*
H9C0.81960.04160.52260.078*
C100.1578 (3)0.19014 (17)0.24463 (14)0.0464 (4)
H10A0.00330.15880.25320.070*
H10B0.17340.12420.16980.070*
H10C0.18340.27720.23820.070*
C110.1968 (3)0.56646 (15)0.67177 (13)0.0337 (3)
H11A0.04000.52020.66900.051*
H11B0.19250.61860.62100.051*
H11C0.28230.62740.75750.051*
C120.5089 (2)0.35932 (13)0.87080 (11)0.0264 (3)
C130.6686 (2)0.31841 (15)0.92889 (12)0.0310 (3)
H130.82790.36250.94540.037*
C140.5933 (3)0.21171 (15)0.96292 (13)0.0350 (3)
H140.69940.18101.00230.042*
C150.3616 (3)0.15211 (14)0.93807 (13)0.0348 (3)
C160.1997 (3)0.19321 (15)0.88255 (14)0.0361 (3)
H160.04070.14990.86780.043*
C170.2753 (2)0.29939 (15)0.84890 (13)0.0326 (3)
H170.16830.33090.81120.039*
U11U22U33U12U13U23
S0.02613 (19)0.03171 (19)0.02281 (17)0.00535 (14)0.00233 (13)0.01064 (13)
F0.0627 (7)0.0372 (5)0.0530 (6)0.0114 (5)0.0166 (5)0.0253 (4)
O10.0271 (5)0.0333 (5)0.0240 (4)0.0108 (4)0.0038 (4)0.0120 (4)
O20.0236 (5)0.0554 (7)0.0374 (5)0.0007 (5)0.0002 (4)0.0234 (5)
C10.0236 (6)0.0306 (6)0.0240 (6)0.0080 (5)0.0055 (5)0.0117 (5)
C20.0237 (6)0.0285 (6)0.0278 (6)0.0069 (5)0.0080 (5)0.0129 (5)
C30.0284 (7)0.0352 (7)0.0417 (8)0.0131 (6)0.0124 (6)0.0200 (6)
C40.0403 (8)0.0319 (7)0.0522 (9)0.0148 (6)0.0261 (7)0.0208 (7)
C50.0491 (9)0.0294 (7)0.0377 (7)0.0090 (6)0.0233 (7)0.0098 (6)
C60.0389 (8)0.0304 (7)0.0275 (6)0.0044 (6)0.0116 (6)0.0103 (5)
C70.0269 (7)0.0285 (6)0.0269 (6)0.0073 (5)0.0084 (5)0.0122 (5)
C80.0246 (6)0.0298 (6)0.0241 (6)0.0075 (5)0.0063 (5)0.0121 (5)
C90.0561 (11)0.0433 (9)0.0754 (13)0.0285 (8)0.0380 (10)0.0278 (9)
C100.0601 (11)0.0419 (8)0.0245 (7)0.0067 (8)0.0047 (7)0.0086 (6)
C110.0315 (7)0.0368 (7)0.0357 (7)0.0160 (6)0.0099 (6)0.0145 (6)
C120.0257 (6)0.0304 (6)0.0210 (5)0.0083 (5)0.0049 (5)0.0092 (5)
C130.0264 (7)0.0374 (7)0.0280 (6)0.0119 (6)0.0053 (5)0.0118 (5)
C140.0393 (8)0.0368 (7)0.0314 (7)0.0187 (6)0.0065 (6)0.0138 (6)
C150.0454 (9)0.0280 (6)0.0294 (6)0.0100 (6)0.0120 (6)0.0105 (5)
C160.0296 (7)0.0377 (7)0.0359 (7)0.0047 (6)0.0078 (6)0.0138 (6)
C170.0257 (7)0.0396 (7)0.0316 (7)0.0100 (6)0.0041 (5)0.0154 (6)
S—O21.4919 (11)C9—H9A0.9800
S—C11.7521 (13)C9—H9B0.9800
S—C121.8013 (14)C9—H9C0.9800
F—C151.3591 (17)C10—H10A0.9800
O1—C81.3702 (15)C10—H10B0.9800
O1—C71.3814 (16)C10—H10C0.9800
C1—C81.3567 (19)C11—H11A0.9800
C1—C21.4450 (18)C11—H11B0.9800
C2—C71.3899 (19)C11—H11C0.9800
C2—C31.3942 (19)C12—C131.3811 (19)
C3—C41.388 (2)C12—C171.3885 (19)
C3—H30.9500C13—C141.393 (2)
C4—C51.406 (2)C13—H130.9500
C4—C91.509 (2)C14—C151.372 (2)
C5—C61.387 (2)C14—H140.9500
C5—H50.9500C15—C161.378 (2)
C6—C71.3856 (19)C16—C171.385 (2)
C6—C101.503 (2)C16—H160.9500
C8—C111.4799 (19)C17—H170.9500
O2—S—C1108.53 (6)H9A—C9—H9C109.5
O2—S—C12105.94 (6)H9B—C9—H9C109.5
C1—S—C1297.96 (6)C6—C10—H10A109.5
C8—O1—C7106.44 (10)C6—C10—H10B109.5
C8—C1—C2107.66 (11)H10A—C10—H10B109.5
C8—C1—S122.90 (10)C6—C10—H10C109.5
C2—C1—S129.43 (10)H10A—C10—H10C109.5
C7—C2—C3119.26 (13)H10B—C10—H10C109.5
C7—C2—C1104.44 (11)C8—C11—H11A109.5
C3—C2—C1136.30 (13)C8—C11—H11B109.5
C4—C3—C2118.46 (14)H11A—C11—H11B109.5
C4—C3—H3120.8C8—C11—H11C109.5
C2—C3—H3120.8H11A—C11—H11C109.5
C3—C4—C5119.76 (14)H11B—C11—H11C109.5
C3—C4—C9119.71 (16)C13—C12—C17121.61 (13)
C5—C4—C9120.53 (15)C13—C12—S118.26 (11)
C6—C5—C4123.51 (14)C17—C12—S119.88 (11)
C6—C5—H5118.2C12—C13—C14119.19 (13)
C4—C5—H5118.2C12—C13—H13120.4
C7—C6—C5114.30 (14)C14—C13—H13120.4
C7—C6—C10121.21 (15)C15—C14—C13118.22 (14)
C5—C6—C10124.49 (14)C15—C14—H14120.9
O1—C7—C6124.51 (13)C13—C14—H14120.9
O1—C7—C2110.78 (11)F—C15—C14118.43 (14)
C6—C7—C2124.70 (13)F—C15—C16118.07 (14)
C1—C8—O1110.67 (11)C14—C15—C16123.49 (14)
C1—C8—C11133.59 (12)C15—C16—C17118.13 (14)
O1—C8—C11115.72 (11)C15—C16—H16120.9
C4—C9—H9A109.5C17—C16—H16120.9
C4—C9—H9B109.5C16—C17—C12119.34 (14)
H9A—C9—H9B109.5C16—C17—H17120.3
C4—C9—H9C109.5C12—C17—H17120.3
O2—S—C1—C8−134.93 (12)C1—C2—C7—O10.50 (14)
C12—S—C1—C8115.24 (12)C3—C2—C7—C61.2 (2)
O2—S—C1—C244.44 (14)C1—C2—C7—C6−178.86 (13)
C12—S—C1—C2−65.40 (13)C2—C1—C8—O10.87 (15)
C8—C1—C2—C7−0.82 (15)S—C1—C8—O1−179.65 (9)
S—C1—C2—C7179.74 (11)C2—C1—C8—C11179.02 (14)
C8—C1—C2—C3179.13 (15)S—C1—C8—C11−1.5 (2)
S—C1—C2—C3−0.3 (2)C7—O1—C8—C1−0.55 (15)
C7—C2—C3—C4−0.7 (2)C7—O1—C8—C11−179.07 (11)
C1—C2—C3—C4179.31 (15)O2—S—C12—C1312.66 (12)
C2—C3—C4—C5−0.2 (2)C1—S—C12—C13124.61 (11)
C2—C3—C4—C9179.74 (13)O2—S—C12—C17−172.98 (11)
C3—C4—C5—C60.8 (2)C1—S—C12—C17−61.03 (12)
C9—C4—C5—C6−179.12 (14)C17—C12—C13—C142.0 (2)
C4—C5—C6—C7−0.4 (2)S—C12—C13—C14176.26 (10)
C4—C5—C6—C10179.89 (15)C12—C13—C14—C15−0.6 (2)
C8—O1—C7—C6179.37 (13)C13—C14—C15—F−179.71 (12)
C8—O1—C7—C20.00 (14)C13—C14—C15—C16−0.8 (2)
C5—C6—C7—O1−179.85 (12)F—C15—C16—C17179.68 (13)
C10—C6—C7—O1−0.2 (2)C14—C15—C16—C170.7 (2)
C5—C6—C7—C2−0.6 (2)C15—C16—C17—C120.7 (2)
C10—C6—C7—C2179.13 (14)C13—C12—C17—C16−2.0 (2)
C3—C2—C7—O1−179.46 (12)S—C12—C17—C16−176.20 (11)
Cg is the centroid of the C2–C7 ring.
D—H···AD—HH···AD···AD—H···A
C13—H13···O2i0.952.503.194 (2)130
C11—H11B···Cgii0.982.873.663 (2)139
Table 1

Hydrogen-bond geometry (Å, °)

Cg is the centroid of the C2–C7 ring.

D—H⋯AD—HH⋯ADAD—H⋯A
C13—H13⋯O2i0.952.503.194 (2)130
C11—H11BCgii0.982.873.663 (2)139

Symmetry codes: (i) ; (ii) .

  7 in total

1.  Benzofurans and another constituent from seeds of Styrax officinalis.

Authors:  Yurdanur Yayla Akgul; Huseyin Anil
Journal:  Phytochemistry       Date:  2003-08       Impact factor: 4.072

2.  A new structural alternative in benzo[b]furans for antimicrobial activity.

Authors:  M Wahab Khan; M Jahangir Alam; M A Rashid; R Chowdhury
Journal:  Bioorg Med Chem       Date:  2005-08-15       Impact factor: 3.641

3.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  Artoindonesianins X and Y, two isoprenylated 2-arylbenzofurans, from Artocarpus fretessi (Moraceae).

Authors:  Nunuk H Soekamto; Sjamsul A Achmad; Emilio L Ghisalberti; Euis H Hakim; Yana M Syah
Journal:  Phytochemistry       Date:  2003-10       Impact factor: 4.072

5.  2,5,7-Trimethyl-3-phenyl-sulfinyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-05

6.  Synthesis of potent antitumor and antiviral benzofuran derivatives.

Authors:  Shadia A Galal; Amira S Abd El-All; Mohamed M Abdallah; Hoda I El-Diwani
Journal:  Bioorg Med Chem Lett       Date:  2009-03-21       Impact factor: 2.823

7.  2,4,6-Trimethyl-3-phenyl-sulfinyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-07-12
  7 in total
  10 in total

1.  3-(2-Fluoro-phenyl-sulfin-yl)-2,5,7-tri-methyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-04

2.  3-(4-Chloro-phenyl-sulfin-yl)-2,5,7-tri-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-08-18

3.  3-(4-Chloro-phenyl-sulfin-yl)-2,5-dimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-09-11

4.  3-(4-Fluoro-phenyl-sulfin-yl)-5-iodo-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-30

5.  5-Cyclo-hexyl-3-(4-fluoro-phenyl-sulfin-yl)-2-methyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-02

6.  3-(3-Fluoro-phenyl-sulfin-yl)-2,5,7-trimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Byeng Wha Son; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-05-20

7.  3-(4-Bromo-phenyl-sulfin-yl)-2,5,7-trimethyl-1-benzofuran.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2012-01-21

8.  3-(2-Bromo-phenyl-sulfin-yl)-2,5,7-trimethyl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-07-24

9.  3-(4-Chloro-phenyl-sulfin-yl)-2,4,7-tri-meth-yl-1-benzo-furan.

Authors:  Hong Dae Choi; Pil Ja Seo; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-08-03

10.  Crystal structure of 2-ethyl-3-(4-fluoro-phenyl-sulfin-yl)-5,7-dimethyl-1-benzo-furan.

Authors:  Hong Dae Choi; Uk Lee
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-08-30
  10 in total

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