| Literature DB >> 21579786 |
Hoong-Kun Fun, Chin Sing Yeap, C S Chidan Kumar, H S Yathirajan, B Narayana.
Abstract
In the title mol-ecular salt, C(5)H(13)N(2)O(2)S(+)·Cl(-), the complete cation is generated by crystallographic mirror symmetry, with both N atoms, the S atom and one C atom lying on the reflecting plane. The chloride ion also lies on the mirror plane. The piperazinium ring adopts a chair conformation and the N-S bond adopts an equatorial orientation. In the crystal structure, the component ions are linked into a three-dimensional framework by inter-molecular N-H⋯Cl and C-H⋯Cl hydrogen bonds.Entities:
Year: 2010 PMID: 21579786 PMCID: PMC2979749 DOI: 10.1107/S1600536810001224
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C5H13N2O2S+·Cl− | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yb | Cell parameters from 4890 reflections |
| θ = 3.4–40.1° | |
| µ = 0.64 mm−1 | |
| β = 100.700 (1)° | Plate, colourless |
| 0.36 × 0.32 × 0.05 mm | |
| Bruker APEX Duo CCD diffractometer | 2790 independent reflections |
| Radiation source: fine-focus sealed tube | 2419 reflections with |
| graphite | |
| φ and ω scans | θmax = 40.1°, θmin = 2.6° |
| Absorption correction: multi-scan ( | |
| 10626 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2790 reflections | (Δ/σ)max = 0.001 |
| 87 parameters | Δρmax = 0.49 e Å−3 |
| 0 restraints | Δρmin = −0.40 e Å−3 |
| Experimental. The crystal was placed in the cold stream of an Oxford Cyrosystems Cobra open-flow nitrogen cryostat (Cosier & Glazer, 1986) operating at 100.0 (1) K. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Cl1 | 0.30674 (3) | 0.2500 | 0.93448 (3) | 0.01195 (5) | |
| S1 | 0.69091 (3) | 0.2500 | 0.56598 (2) | 0.00951 (5) | |
| N1 | 0.82854 (12) | 0.2500 | 0.03611 (9) | 0.01007 (11) | |
| N2 | 0.79320 (12) | 0.2500 | 0.38830 (9) | 0.00974 (11) | |
| O1 | 0.75935 (9) | 0.11396 (6) | 0.65235 (6) | 0.01498 (9) | |
| C1 | 0.87784 (10) | 0.11522 (7) | 0.14202 (8) | 0.01165 (9) | |
| C2 | 0.74465 (10) | 0.11465 (7) | 0.28537 (8) | 0.01168 (9) | |
| C3 | 0.39411 (15) | 0.2500 | 0.50705 (12) | 0.01332 (13) | |
| H1A | 0.8351 (18) | 0.0315 (13) | 0.0719 (14) | 0.012 (2)* | |
| H1B | 1.040 (2) | 0.1186 (13) | 0.1845 (16) | 0.016 (3)* | |
| H2A | 0.583 (2) | 0.1017 (14) | 0.2371 (15) | 0.018 (3)* | |
| H2B | 0.789 (2) | 0.0335 (16) | 0.3554 (17) | 0.027 (3)* | |
| H3A | 0.331 (3) | 0.2500 | 0.606 (2) | 0.019 (4)* | |
| H3B | 0.350 (2) | 0.3381 (15) | 0.4460 (16) | 0.025 (3)* | |
| H1N1 | 0.914 (3) | 0.2500 | −0.048 (2) | 0.019 (4)* | |
| H2N1 | 0.677 (3) | 0.2500 | −0.017 (2) | 0.021 (4)* |
| Cl1 | 0.00886 (7) | 0.01261 (8) | 0.01485 (9) | 0.000 | 0.00346 (6) | 0.000 |
| S1 | 0.01110 (8) | 0.01033 (8) | 0.00696 (8) | 0.000 | 0.00128 (6) | 0.000 |
| N1 | 0.0098 (2) | 0.0115 (3) | 0.0095 (3) | 0.000 | 0.00316 (19) | 0.000 |
| N2 | 0.0126 (2) | 0.0084 (2) | 0.0087 (2) | 0.000 | 0.0032 (2) | 0.000 |
| O1 | 0.01874 (19) | 0.01499 (19) | 0.01109 (18) | 0.00356 (16) | 0.00245 (15) | 0.00480 (15) |
| C1 | 0.0148 (2) | 0.00900 (19) | 0.0122 (2) | 0.00097 (17) | 0.00547 (17) | −0.00041 (17) |
| C2 | 0.0162 (2) | 0.0083 (2) | 0.0117 (2) | −0.00109 (16) | 0.00571 (17) | −0.00060 (16) |
| C3 | 0.0115 (3) | 0.0166 (3) | 0.0121 (3) | 0.000 | 0.0027 (2) | 0.000 |
| S1—O1i | 1.4408 (5) | N2—C2i | 1.4806 (7) |
| S1—O1 | 1.4408 (5) | C1—C2 | 1.5148 (8) |
| S1—N2 | 1.6484 (7) | C1—H1A | 0.953 (11) |
| S1—C3 | 1.7621 (9) | C1—H1B | 0.976 (12) |
| N1—C1 | 1.4892 (7) | C2—H2A | 0.983 (13) |
| N1—C1i | 1.4892 (7) | C2—H2B | 0.935 (14) |
| N1—H1N1 | 0.920 (17) | C3—H3A | 0.941 (18) |
| N1—H2N1 | 0.933 (19) | C3—H3B | 0.951 (14) |
| N2—C2 | 1.4806 (7) | ||
| O1i—S1—O1 | 118.67 (4) | N1—C1—C2 | 110.75 (5) |
| O1i—S1—N2 | 107.01 (2) | N1—C1—H1A | 108.8 (7) |
| O1—S1—N2 | 107.01 (2) | C2—C1—H1A | 108.5 (6) |
| O1i—S1—C3 | 108.28 (3) | N1—C1—H1B | 104.6 (7) |
| O1—S1—C3 | 108.29 (3) | C2—C1—H1B | 112.1 (7) |
| N2—S1—C3 | 107.03 (4) | H1A—C1—H1B | 112.0 (9) |
| C1—N1—C1i | 111.07 (7) | N2—C2—C1 | 109.81 (5) |
| C1—N1—H1N1 | 109.7 (5) | N2—C2—H2A | 113.4 (7) |
| C1i—N1—H1N1 | 109.7 (5) | C1—C2—H2A | 109.1 (7) |
| C1—N1—H2N1 | 109.5 (5) | N2—C2—H2B | 108.7 (8) |
| C1i—N1—H2N1 | 109.5 (5) | C1—C2—H2B | 108.7 (7) |
| H1N1—N1—H2N1 | 107.3 (15) | H2A—C2—H2B | 107.1 (10) |
| C2—N2—C2i | 112.77 (7) | S1—C3—H3A | 108.9 (11) |
| C2—N2—S1 | 114.27 (4) | S1—C3—H3B | 108.1 (8) |
| C2i—N2—S1 | 114.27 (4) | H3A—C3—H3B | 108.3 (9) |
| O1i—S1—N2—C2 | 178.10 (5) | C3—S1—N2—C2i | 66.00 (5) |
| O1—S1—N2—C2 | 49.91 (6) | C1i—N1—C1—C2 | 56.95 (8) |
| C3—S1—N2—C2 | −65.99 (5) | C2i—N2—C2—C1 | 56.73 (8) |
| O1i—S1—N2—C2i | −49.91 (6) | S1—N2—C2—C1 | −170.56 (4) |
| O1—S1—N2—C2i | −178.10 (5) | N1—C1—C2—N2 | −55.89 (7) |
| H··· | ||||
| N1—H1N1···Cl1ii | 0.92 (2) | 2.40 (2) | 3.1341 (8) | 137 (1) |
| N1—H2N1···Cl1iii | 0.93 (2) | 2.19 (2) | 3.0966 (8) | 164 (1) |
| C1—H1A···Cl1iv | 0.953 (12) | 2.700 (12) | 3.5251 (6) | 145.2 (9) |
| C3—H3A···Cl1 | 0.94 (2) | 2.65 (2) | 3.5487 (10) | 160 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.92 (2) | 2.40 (2) | 3.1341 (8) | 137 (1) |
| N1—H2 | 0.93 (2) | 2.19 (2) | 3.0966 (8) | 164 (1) |
| C1—H1 | 0.953 (12) | 2.700 (12) | 3.5251 (6) | 145.2 (9) |
| C3—H3 | 0.94 (2) | 2.65 (2) | 3.5487 (10) | 160 (2) |
Symmetry codes: (i) ; (ii) ; (iii) .