| Literature DB >> 21579762 |
Matloob Ahmad, Hamid Latif Siddiqui, Muhammad Zia-Ur-Rehman, Mark R J Elsegood, George W Weaver.
Abstract
In the title compound, C(14)H(15)NO(6)S, the thia-zine ring adopts a distorted half-chair conformation. The structure displays several cooperative weak inter-molecular C-H⋯O hydrogen-bonding inter-actions, giving rise to a two-dimensional sheet packing motif. The CH(2) group in the meth-oxy linker to the oxirane ring, and the CH group in that ring, exhibit twofold positional disorder. The three-membered oxirane ring is twisted approximately perpendicular with respect to thia-zine ring (dihedral angle = 60/86° for the major/minor disorder components). 1,2-Benzothia-zines of this kind have a wide range of biological activities and are mainly used as medicines in the treatment of inflammation and rheumatoid arthritis.Entities:
Year: 2010 PMID: 21579762 PMCID: PMC2979684 DOI: 10.1107/S1600536810000668
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C14H15NO6S | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 4610 reflections |
| θ = 2.6–31.4° | |
| µ = 0.25 mm−1 | |
| β = 96.5250 (7)° | Block, colourless |
| 0.44 × 0.37 × 0.24 mm | |
| Bruker APEXII CCD diffractometer | 4516 independent reflections |
| Radiation source: fine-focus sealed tube | 3651 reflections with |
| graphite | |
| ω rotation with narrow frames scans | θmax = 31.7°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 11439 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 4516 reflections | (Δ/σ)max = 0.001 |
| 220 parameters | Δρmax = 0.70 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| S1 | 0.34508 (6) | 0.47351 (3) | 0.61034 (2) | 0.04004 (14) | |
| O1 | 0.53323 (19) | 0.44619 (11) | 0.64070 (9) | 0.0512 (3) | |
| O2 | 0.2622 (2) | 0.43268 (12) | 0.53097 (8) | 0.0601 (4) | |
| N2 | 0.2133 (2) | 0.44064 (11) | 0.68409 (9) | 0.0387 (3) | |
| C3 | 0.2671 (2) | 0.48744 (13) | 0.76543 (10) | 0.0373 (3) | |
| C4 | 0.3247 (2) | 0.58822 (13) | 0.76958 (10) | 0.0368 (3) | |
| C5 | 0.3205 (2) | 0.65332 (13) | 0.69280 (10) | 0.0366 (3) | |
| C6 | 0.3032 (3) | 0.76159 (14) | 0.69774 (14) | 0.0481 (4) | |
| H6 | 0.3046 | 0.7937 | 0.7506 | 0.058* | |
| C7 | 0.2842 (3) | 0.82078 (16) | 0.62423 (17) | 0.0594 (5) | |
| H7 | 0.2724 | 0.8927 | 0.6283 | 0.071* | |
| C8 | 0.2823 (3) | 0.77530 (17) | 0.54444 (16) | 0.0571 (5) | |
| H8 | 0.2684 | 0.8163 | 0.4956 | 0.069* | |
| C9 | 0.3014 (3) | 0.66804 (16) | 0.53801 (12) | 0.0465 (4) | |
| H9 | 0.3006 | 0.6364 | 0.4850 | 0.056* | |
| C10 | 0.3215 (2) | 0.60897 (13) | 0.61187 (10) | 0.0364 (3) | |
| C11 | 0.0099 (3) | 0.43184 (18) | 0.65850 (14) | 0.0550 (5) | |
| H11A | −0.0408 | 0.4996 | 0.6443 | 0.082* | |
| H11B | −0.0493 | 0.4034 | 0.7048 | 0.082* | |
| H11C | −0.0121 | 0.3869 | 0.6098 | 0.082* | |
| C12 | 0.2533 (3) | 0.42003 (16) | 0.84103 (11) | 0.0456 (4) | |
| O3 | 0.2713 (3) | 0.44879 (15) | 0.91356 (10) | 0.0813 (6) | |
| O4 | 0.2175 (2) | 0.32170 (12) | 0.81730 (9) | 0.0546 (3) | |
| C13 | 0.2062 (3) | 0.2467 (2) | 0.88466 (17) | 0.0661 (6) | |
| H13A | 0.1027 | 0.2636 | 0.9154 | 0.099* | |
| H13B | 0.3199 | 0.2482 | 0.9229 | 0.099* | |
| H13C | 0.1885 | 0.1783 | 0.8605 | 0.099* | |
| O5 | 0.37071 (18) | 0.63669 (11) | 0.84539 (8) | 0.0469 (3) | |
| C14 | 0.5579 (4) | 0.6871 (3) | 0.8572 (2) | 0.0451 (8) | 0.646 (6) |
| H14A | 0.5811 | 0.7217 | 0.8049 | 0.054* | 0.646 (6) |
| H14B | 0.5605 | 0.7392 | 0.9018 | 0.054* | 0.646 (6) |
| C15 | 0.7068 (5) | 0.6087 (3) | 0.8807 (2) | 0.0500 (8) | 0.646 (6) |
| H15 | 0.6875 | 0.5604 | 0.9270 | 0.060* | 0.646 (6) |
| C16 | 0.8933 (4) | 0.6281 (2) | 0.8656 (2) | 0.0836 (8) | |
| H16A | 0.9917 | 0.5941 | 0.9028 | 0.100* | 0.646 (6) |
| H16B | 0.9238 | 0.6977 | 0.8477 | 0.100* | 0.646 (6) |
| H16C | 0.9273 | 0.5999 | 0.9223 | 0.100* | 0.354 (6) |
| H16D | 0.9886 | 0.6711 | 0.8444 | 0.100* | 0.354 (6) |
| O6 | 0.7826 (3) | 0.56506 (15) | 0.80605 (13) | 0.0782 (5) | |
| C14X | 0.5510 (8) | 0.6227 (7) | 0.8916 (4) | 0.057 (2) | 0.354 (6) |
| H14C | 0.5688 | 0.5497 | 0.9059 | 0.069* | 0.354 (6) |
| H14D | 0.5578 | 0.6618 | 0.9444 | 0.069* | 0.354 (6) |
| C15X | 0.7008 (8) | 0.6571 (6) | 0.8428 (5) | 0.0577 (19) | 0.354 (6) |
| H15X | 0.6761 | 0.7179 | 0.8057 | 0.069* | 0.354 (6) |
| S1 | 0.0542 (3) | 0.0363 (2) | 0.0306 (2) | 0.00076 (16) | 0.00890 (16) | −0.00584 (14) |
| O1 | 0.0530 (7) | 0.0515 (7) | 0.0514 (8) | 0.0115 (6) | 0.0160 (6) | −0.0025 (6) |
| O2 | 0.0911 (11) | 0.0555 (8) | 0.0335 (6) | −0.0064 (7) | 0.0059 (7) | −0.0133 (6) |
| N2 | 0.0468 (7) | 0.0380 (7) | 0.0313 (6) | −0.0071 (6) | 0.0045 (5) | −0.0030 (5) |
| C3 | 0.0402 (8) | 0.0430 (8) | 0.0289 (7) | −0.0018 (6) | 0.0050 (6) | −0.0006 (6) |
| C4 | 0.0378 (7) | 0.0428 (8) | 0.0304 (7) | −0.0006 (6) | 0.0065 (5) | −0.0093 (6) |
| C5 | 0.0362 (7) | 0.0358 (7) | 0.0384 (8) | −0.0005 (6) | 0.0070 (6) | −0.0037 (6) |
| C6 | 0.0459 (9) | 0.0390 (8) | 0.0603 (11) | 0.0014 (7) | 0.0103 (8) | −0.0083 (8) |
| C7 | 0.0552 (11) | 0.0375 (9) | 0.0866 (16) | 0.0056 (8) | 0.0125 (10) | 0.0097 (10) |
| C8 | 0.0519 (10) | 0.0546 (11) | 0.0655 (13) | 0.0047 (9) | 0.0095 (9) | 0.0221 (10) |
| C9 | 0.0444 (9) | 0.0561 (10) | 0.0393 (8) | −0.0004 (8) | 0.0062 (7) | 0.0092 (8) |
| C10 | 0.0398 (7) | 0.0362 (7) | 0.0336 (7) | −0.0002 (6) | 0.0064 (6) | −0.0001 (6) |
| C11 | 0.0496 (10) | 0.0624 (12) | 0.0509 (11) | −0.0095 (9) | −0.0028 (8) | −0.0024 (9) |
| C12 | 0.0443 (9) | 0.0565 (10) | 0.0362 (8) | −0.0017 (8) | 0.0059 (6) | 0.0082 (7) |
| O3 | 0.1263 (17) | 0.0833 (12) | 0.0346 (7) | −0.0132 (11) | 0.0108 (9) | 0.0083 (7) |
| O4 | 0.0625 (8) | 0.0499 (8) | 0.0511 (8) | −0.0061 (6) | 0.0045 (6) | 0.0157 (6) |
| C13 | 0.0581 (12) | 0.0672 (14) | 0.0722 (15) | −0.0055 (10) | 0.0040 (10) | 0.0354 (12) |
| O5 | 0.0506 (7) | 0.0567 (8) | 0.0339 (6) | −0.0054 (6) | 0.0068 (5) | −0.0157 (5) |
| C14 | 0.0521 (16) | 0.0411 (16) | 0.0413 (15) | −0.0052 (11) | 0.0025 (11) | −0.0107 (13) |
| C15 | 0.0631 (19) | 0.0476 (18) | 0.0383 (15) | 0.0020 (14) | 0.0021 (12) | −0.0019 (13) |
| C16 | 0.0560 (13) | 0.0798 (17) | 0.112 (2) | 0.0020 (12) | −0.0028 (14) | −0.0217 (17) |
| O6 | 0.0746 (11) | 0.0750 (11) | 0.0880 (13) | 0.0021 (9) | 0.0224 (10) | −0.0291 (10) |
| C14X | 0.043 (3) | 0.092 (6) | 0.035 (3) | 0.005 (3) | −0.003 (2) | −0.016 (3) |
| C15X | 0.049 (3) | 0.057 (4) | 0.067 (4) | −0.002 (3) | 0.007 (3) | −0.010 (3) |
| S1—O2 | 1.4249 (14) | C12—O4 | 1.334 (3) |
| S1—O1 | 1.4285 (15) | O4—C13 | 1.444 (2) |
| S1—N2 | 1.6384 (14) | C13—H13A | 0.9600 |
| S1—C10 | 1.7484 (17) | C13—H13B | 0.9600 |
| N2—C3 | 1.430 (2) | C13—H13C | 0.9600 |
| N2—C11 | 1.478 (2) | O5—C14X | 1.426 (6) |
| C3—C4 | 1.358 (2) | O5—C14 | 1.488 (3) |
| C3—C12 | 1.487 (2) | C14—C15 | 1.486 (5) |
| C4—O5 | 1.3559 (18) | C14—H14A | 0.9700 |
| C4—C5 | 1.470 (2) | C14—H14B | 0.9700 |
| C5—C6 | 1.399 (2) | C15—C16 | 1.413 (5) |
| C5—C10 | 1.399 (2) | C15—O6 | 1.465 (4) |
| C6—C7 | 1.381 (3) | C15—H15 | 0.9800 |
| C6—H6 | 0.9300 | C16—O6 | 1.416 (3) |
| C7—C8 | 1.387 (3) | C16—C15X | 1.441 (7) |
| C7—H7 | 0.9300 | C16—H16A | 0.9700 |
| C8—C9 | 1.389 (3) | C16—H16B | 0.9700 |
| C8—H8 | 0.9300 | C16—H16C | 0.9699 |
| C9—C10 | 1.385 (2) | C16—H16D | 0.9701 |
| C9—H9 | 0.9300 | O6—C15X | 1.469 (7) |
| C11—H11A | 0.9600 | C14X—C15X | 1.462 (11) |
| C11—H11B | 0.9600 | C14X—H14C | 0.9700 |
| C11—H11C | 0.9600 | C14X—H14D | 0.9700 |
| C12—O3 | 1.196 (2) | C15X—H15X | 0.9800 |
| O2—S1—O1 | 119.39 (9) | H13B—C13—H13C | 109.5 |
| O2—S1—N2 | 108.14 (9) | C4—O5—C14X | 120.7 (3) |
| O1—S1—N2 | 107.59 (8) | C4—O5—C14 | 115.97 (16) |
| O2—S1—C10 | 110.29 (9) | C15—C14—O5 | 110.7 (3) |
| O1—S1—C10 | 109.25 (8) | C15—C14—H14A | 109.5 |
| N2—S1—C10 | 100.47 (7) | O5—C14—H14A | 109.5 |
| C3—N2—C11 | 115.86 (14) | C15—C14—H14B | 109.5 |
| C3—N2—S1 | 114.17 (11) | O5—C14—H14B | 109.5 |
| C11—N2—S1 | 117.46 (12) | H14A—C14—H14B | 108.1 |
| C4—C3—N2 | 119.59 (14) | C16—C15—O6 | 58.9 (2) |
| C4—C3—C12 | 124.33 (15) | C16—C15—C14 | 120.8 (4) |
| N2—C3—C12 | 116.07 (15) | O6—C15—C14 | 112.5 (3) |
| O5—C4—C3 | 121.52 (15) | C16—C15—H15 | 117.0 |
| O5—C4—C5 | 116.50 (15) | O6—C15—H15 | 117.0 |
| C3—C4—C5 | 121.65 (14) | C14—C15—H15 | 117.0 |
| C6—C5—C10 | 117.72 (16) | C15—C16—O6 | 62.37 (18) |
| C6—C5—C4 | 120.88 (15) | O6—C16—C15X | 61.9 (3) |
| C10—C5—C4 | 121.28 (14) | C15—C16—H16A | 117.5 |
| C7—C6—C5 | 120.10 (19) | O6—C16—H16A | 117.5 |
| C7—C6—H6 | 120.0 | C15X—C16—H16A | 152.0 |
| C5—C6—H6 | 120.0 | C15—C16—H16B | 117.5 |
| C6—C7—C8 | 121.39 (19) | O6—C16—H16B | 117.5 |
| C6—C7—H7 | 119.3 | C15X—C16—H16B | 86.1 |
| C8—C7—H7 | 119.3 | H16A—C16—H16B | 114.6 |
| C7—C8—C9 | 119.55 (19) | C15—C16—H16C | 85.6 |
| C7—C8—H8 | 120.2 | O6—C16—H16C | 117.6 |
| C9—C8—H8 | 120.2 | C15X—C16—H16C | 117.5 |
| C10—C9—C8 | 118.92 (18) | H16B—C16—H16C | 124.8 |
| C10—C9—H9 | 120.5 | C15—C16—H16D | 151.9 |
| C8—C9—H9 | 120.5 | O6—C16—H16D | 117.6 |
| C9—C10—C5 | 122.31 (16) | C15X—C16—H16D | 117.7 |
| C9—C10—S1 | 122.33 (13) | H16A—C16—H16D | 88.2 |
| C5—C10—S1 | 115.35 (12) | H16C—C16—H16D | 114.7 |
| N2—C11—H11A | 109.5 | C16—O6—C15 | 58.70 (19) |
| N2—C11—H11B | 109.5 | C16—O6—C15X | 59.9 (3) |
| H11A—C11—H11B | 109.5 | O5—C14X—C15X | 112.1 (6) |
| N2—C11—H11C | 109.5 | O5—C14X—H14C | 109.2 |
| H11A—C11—H11C | 109.5 | C15X—C14X—H14C | 109.2 |
| H11B—C11—H11C | 109.5 | O5—C14X—H14D | 109.2 |
| O3—C12—O4 | 123.89 (18) | C15X—C14X—H14D | 109.2 |
| O3—C12—C3 | 125.4 (2) | H14C—C14X—H14D | 107.9 |
| O4—C12—C3 | 110.75 (15) | C16—C15X—C14X | 122.4 (8) |
| C12—O4—C13 | 116.76 (18) | C16—C15X—O6 | 58.2 (3) |
| O4—C13—H13A | 109.5 | C14X—C15X—O6 | 108.5 (7) |
| O4—C13—H13B | 109.5 | C16—C15X—H15X | 117.4 |
| H13A—C13—H13B | 109.5 | C14X—C15X—H15X | 117.4 |
| O4—C13—H13C | 109.5 | O6—C15X—H15X | 117.4 |
| H13A—C13—H13C | 109.5 | ||
| O2—S1—N2—C3 | −172.61 (13) | N2—S1—C10—C5 | 39.59 (14) |
| O1—S1—N2—C3 | 57.18 (14) | C4—C3—C12—O3 | 8.5 (3) |
| C10—S1—N2—C3 | −57.04 (13) | N2—C3—C12—O3 | −170.9 (2) |
| O2—S1—N2—C11 | −32.06 (16) | C4—C3—C12—O4 | −171.60 (16) |
| O1—S1—N2—C11 | −162.27 (14) | N2—C3—C12—O4 | 9.0 (2) |
| C10—S1—N2—C11 | 83.50 (14) | O3—C12—O4—C13 | −2.0 (3) |
| C11—N2—C3—C4 | −101.63 (19) | C3—C12—O4—C13 | 178.12 (16) |
| S1—N2—C3—C4 | 39.6 (2) | C3—C4—O5—C14X | 81.6 (5) |
| C11—N2—C3—C12 | 77.8 (2) | C5—C4—O5—C14X | −104.9 (5) |
| S1—N2—C3—C12 | −141.04 (13) | C3—C4—O5—C14 | 126.8 (2) |
| N2—C3—C4—O5 | 177.68 (14) | C5—C4—O5—C14 | −59.7 (2) |
| C12—C3—C4—O5 | −1.7 (3) | C4—O5—C14—C15 | −79.8 (3) |
| N2—C3—C4—C5 | 4.5 (2) | C14X—O5—C14—C15 | 27.8 (4) |
| C12—C3—C4—C5 | −174.86 (15) | O5—C14—C15—C16 | 157.0 (3) |
| O5—C4—C5—C6 | −20.4 (2) | O5—C14—C15—O6 | 90.8 (3) |
| C3—C4—C5—C6 | 153.18 (17) | C14—C15—C16—O6 | −99.3 (3) |
| O5—C4—C5—C10 | 163.78 (14) | O6—C15—C16—C15X | 79.6 (5) |
| C3—C4—C5—C10 | −22.7 (2) | C14—C15—C16—C15X | −19.7 (5) |
| C10—C5—C6—C7 | 1.3 (3) | C15X—C16—O6—C15 | −39.9 (4) |
| C4—C5—C6—C7 | −174.71 (17) | C15—C16—O6—C15X | 39.9 (4) |
| C5—C6—C7—C8 | −0.2 (3) | C14—C15—O6—C16 | 113.4 (4) |
| C6—C7—C8—C9 | −0.5 (3) | C16—C15—O6—C15X | −81.5 (5) |
| C7—C8—C9—C10 | 0.1 (3) | C14—C15—O6—C15X | 31.9 (5) |
| C8—C9—C10—C5 | 1.0 (3) | C4—O5—C14X—C15X | 60.1 (8) |
| C8—C9—C10—S1 | 179.64 (14) | C14—O5—C14X—C15X | −34.6 (5) |
| C6—C5—C10—C9 | −1.7 (2) | C15—C16—C15X—C14X | 11.7 (5) |
| C4—C5—C10—C9 | 174.28 (15) | O6—C16—C15X—C14X | 92.8 (6) |
| C6—C5—C10—S1 | 179.57 (13) | C15—C16—C15X—O6 | −81.2 (5) |
| C4—C5—C10—S1 | −4.4 (2) | O5—C14X—C15X—C16 | −164.2 (5) |
| O2—S1—C10—C9 | −25.20 (17) | O5—C14X—C15X—O6 | −100.7 (7) |
| O1—S1—C10—C9 | 107.90 (15) | C15—O6—C15X—C16 | 77.6 (5) |
| N2—S1—C10—C9 | −139.14 (15) | C16—O6—C15X—C14X | −117.2 (7) |
| O2—S1—C10—C5 | 153.53 (13) | C15—O6—C15X—C14X | −39.7 (5) |
| O1—S1—C10—C5 | −73.37 (14) |
| H··· | ||||
| C7—H7···O6i | 0.93 | 2.49 | 3.377 (3) | 158 |
| C15—H15···O3ii | 0.98 | 2.50 | 3.317 (4) | 140 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C7—H7⋯O6i | 0.93 | 2.49 | 3.377 (3) | 158 |
| C15—H15⋯O3ii | 0.98 | 2.50 | 3.317 (4) | 140 |
Symmetry codes: (i) ; (ii) .