Literature DB >> 21579523

5-Butyl-amino-2-[2-(dimethyl-amino)eth-yl]-1H-benz[de]isoquinoline-1,3(2H)-dione.

Li-Juan Xie1.   

Abstract

The title compound, C(20)H(25)N(3)O(2), is a new amonafide analogue, which exhibits anti-tumor activity. The asymmetric unit contains two mol-ecules with similar conformations for the substituted aliphatic chains. The two independent mol-ecules form dmers through N-H⋯N hydrogen bonds. The crystal structure is stabilized via π-π stacking inter-actions, the shortest centroid-centroid separation between six-membered rings being 3.673 (2) Å.

Entities:  

Year:  2010        PMID: 21579523      PMCID: PMC2979579          DOI: 10.1107/S1600536810018702

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background to amonafide and its anti­tumour activity, see: Braña et al. (1981 ▶, 2001 ▶); Braña & Ramos (2001 ▶); Ratain et al. (1991 ▶, 1993 ▶). For the synthesis of amonafide analogues, see: Xie et al. (2009 ▶).

Experimental

Crystal data

C20H25N3O2 M = 339.43 Triclinic, a = 11.5978 (12) Å b = 12.5362 (13) Å c = 14.3721 (16) Å α = 72.329 (2)° β = 70.599 (2)° γ = 70.759 (2)° V = 1816.1 (3) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 293 K 0.36 × 0.33 × 0.08 mm

Data collection

Bruker SMART APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.739, T max = 1.000 10049 measured reflections 7018 independent reflections 3025 reflections with I > 2σ(I) R int = 0.059

Refinement

R[F 2 > 2σ(F 2)] = 0.068 wR(F 2) = 0.175 S = 0.86 7018 reflections 466 parameters 3 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.34 e Å−3 Δρmin = −0.25 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT (Bruker, 2001 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810018702/bh2282sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810018702/bh2282Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C20H25N3O2Z = 4
Mr = 339.43F(000) = 728
Triclinic, P1Dx = 1.241 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 11.5978 (12) ÅCell parameters from 1325 reflections
b = 12.5362 (13) Åθ = 5.2–49.0°
c = 14.3721 (16) ŵ = 0.08 mm1
α = 72.329 (2)°T = 293 K
β = 70.599 (2)°Prismatic, yellow
γ = 70.759 (2)°0.36 × 0.33 × 0.08 mm
V = 1816.1 (3) Å3
Bruker SMART APEX CCD area-detector diffractometer7018 independent reflections
Radiation source: fine-focus sealed tube3025 reflections with I > 2σ(I)
graphiteRint = 0.059
φ and ω scansθmax = 26.0°, θmin = 1.9°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −14→13
Tmin = 0.739, Tmax = 1.000k = −15→11
10049 measured reflectionsl = −17→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.068H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.175w = 1/[σ2(Fo2) + (0.0653P)2] where P = (Fo2 + 2Fc2)/3
S = 0.86(Δ/σ)max < 0.001
7018 reflectionsΔρmax = 0.34 e Å3
466 parametersΔρmin = −0.25 e Å3
3 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
0 constraintsExtinction coefficient: 0.0040 (10)
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
O10.6424 (3)0.8935 (2)0.2061 (2)0.0695 (9)
O20.4583 (2)0.7887 (2)0.54144 (19)0.0625 (8)
O30.8585 (3)0.6222 (3)0.8127 (2)0.0754 (9)
O40.6754 (3)0.5191 (3)0.6307 (2)0.0700 (9)
N10.5553 (3)0.8357 (3)0.3739 (2)0.0481 (8)
N20.6845 (3)0.9030 (3)0.7247 (3)0.0592 (10)
N30.6185 (3)0.6109 (3)0.2983 (2)0.0537 (9)
N40.7643 (3)0.5748 (3)0.7207 (2)0.0518 (8)
N50.8927 (4)0.6479 (3)0.2640 (3)0.0665 (11)
N60.5323 (3)0.7148 (3)0.8571 (2)0.0537 (9)
C10.6412 (4)0.8876 (3)0.2925 (3)0.0508 (10)
C20.5400 (4)0.8308 (3)0.4763 (3)0.0480 (10)
C30.6272 (3)0.8762 (3)0.4991 (3)0.0394 (9)
C40.7179 (3)0.9258 (3)0.4200 (3)0.0416 (9)
C50.7264 (3)0.9327 (3)0.3189 (3)0.0461 (10)
C60.8156 (4)0.9811 (3)0.2421 (3)0.0563 (11)
H60.82120.98550.17500.068*
C70.8974 (4)1.0234 (4)0.2660 (3)0.0628 (12)
H70.95731.05630.21440.075*
C80.8902 (3)1.0169 (3)0.3642 (3)0.0578 (11)
H80.94581.04520.37840.069*
C90.8004 (3)0.9683 (3)0.4447 (3)0.0453 (10)
C100.7902 (3)0.9603 (3)0.5474 (3)0.0510 (10)
H100.84390.98900.56350.061*
C110.7023 (3)0.9107 (3)0.6237 (3)0.0453 (10)
C120.6205 (3)0.8696 (3)0.5963 (3)0.0455 (10)
H120.55990.83680.64720.055*
C130.7608 (4)0.9397 (4)0.7643 (3)0.0675 (13)
H13A0.77531.01370.72320.081*
H13B0.84220.88370.76180.081*
C140.6929 (5)0.9512 (5)0.8749 (3)0.108 (2)
H14A0.60630.99570.87750.130*
H14B0.69030.87440.91630.130*
C150.7481 (6)1.0049 (6)0.9201 (4)0.123 (2)
H15A0.83360.95850.92020.148*
H15B0.70031.00240.99010.148*
C160.7529 (6)1.1257 (5)0.8708 (4)0.129 (2)
H16A0.80981.12820.80460.194*
H16B0.78211.15570.91050.194*
H16C0.67001.17180.86540.194*
C170.4680 (4)0.7897 (3)0.3524 (3)0.0567 (11)
H17A0.46490.82240.28250.068*
H17B0.38380.81450.39480.068*
C180.5044 (4)0.6589 (3)0.3698 (3)0.0572 (11)
H18A0.51620.62660.43750.069*
H18B0.43490.63450.36670.069*
C190.6511 (4)0.4846 (4)0.3333 (3)0.0811 (14)
H19A0.58350.45510.33540.122*
H19B0.66400.46490.39970.122*
H19C0.72710.45130.28770.122*
C200.5971 (4)0.6400 (4)0.1975 (3)0.0798 (14)
H20A0.52410.61670.20200.120*
H20B0.66970.60040.15320.120*
H20C0.58350.72210.17140.120*
C210.8560 (4)0.6183 (4)0.7304 (3)0.0565 (11)
C220.7540 (4)0.5639 (3)0.6306 (3)0.0529 (11)
C230.8405 (3)0.6098 (3)0.5360 (3)0.0464 (10)
C240.9353 (3)0.6535 (3)0.5412 (3)0.0468 (10)
C250.9461 (3)0.6572 (3)0.6348 (3)0.0524 (11)
C261.0414 (4)0.6991 (4)0.6382 (3)0.0631 (12)
H261.04810.70280.69980.076*
C271.1271 (4)0.7359 (4)0.5481 (4)0.0669 (13)
H271.19130.76310.55050.080*
C281.1178 (4)0.7325 (4)0.4568 (3)0.0646 (12)
H281.17610.75700.39810.078*
C291.0213 (3)0.6923 (3)0.4503 (3)0.0508 (10)
C301.0069 (4)0.6899 (3)0.3573 (3)0.0580 (11)
H301.06360.71500.29760.070*
C310.9108 (4)0.6512 (3)0.3526 (3)0.0520 (10)
C320.8288 (3)0.6093 (3)0.4460 (3)0.0513 (10)
H320.76510.58070.44470.062*
C330.9693 (4)0.6911 (4)0.1663 (3)0.0804 (15)
H33A1.05760.65330.16360.097*
H33B0.95760.77340.15760.097*
C340.9377 (6)0.6714 (5)0.0831 (4)0.119 (2)
H34A0.84940.70990.08610.142*
H34B0.94780.58910.09310.142*
C351.0166 (7)0.7137 (6)−0.0212 (4)0.157 (3)
H35A0.96360.7421−0.06800.188*
H35B1.04360.7785−0.01960.188*
C361.1246 (7)0.6296 (7)−0.0586 (6)0.207 (4)
H36A1.19440.6293−0.03670.310*
H36B1.14530.6476−0.13110.310*
H36C1.10750.5546−0.03340.310*
C370.6757 (4)0.5292 (3)0.8135 (3)0.0606 (12)
H37A0.70800.51700.87110.073*
H37B0.67160.45460.80960.073*
C380.5425 (4)0.6093 (4)0.8305 (3)0.0581 (11)
H38A0.51460.62910.76940.070*
H38B0.48580.56770.88400.070*
C390.4064 (4)0.7929 (4)0.8558 (3)0.0811 (15)
H39A0.38980.80270.79210.122*
H39B0.40330.86670.86480.122*
H39C0.34380.76040.90950.122*
C400.5512 (4)0.6922 (4)0.9577 (3)0.0810 (15)
H40A0.53680.76440.97540.121*
H40B0.63620.64760.95760.121*
H40C0.49300.64991.00620.121*
H20.649 (3)0.850 (3)0.763 (2)0.065 (14)*
H50.818 (3)0.645 (4)0.271 (3)0.082 (17)*
U11U22U33U12U13U23
O10.087 (2)0.081 (2)0.0454 (18)−0.0301 (18)−0.0225 (16)−0.0058 (15)
O20.0622 (18)0.076 (2)0.0559 (18)−0.0390 (17)−0.0017 (14)−0.0159 (15)
O30.075 (2)0.097 (3)0.059 (2)−0.0247 (19)−0.0253 (17)−0.0121 (17)
O40.0651 (19)0.080 (2)0.073 (2)−0.0406 (18)−0.0019 (15)−0.0221 (16)
N10.0513 (19)0.042 (2)0.054 (2)−0.0131 (16)−0.0176 (16)−0.0100 (16)
N20.070 (2)0.063 (3)0.052 (2)−0.032 (2)−0.0168 (19)−0.0054 (19)
N30.058 (2)0.054 (2)0.053 (2)−0.0076 (18)−0.0205 (17)−0.0165 (17)
N40.049 (2)0.050 (2)0.050 (2)−0.0138 (17)−0.0090 (16)−0.0056 (16)
N50.068 (3)0.079 (3)0.051 (2)−0.025 (2)−0.010 (2)−0.0106 (19)
N60.057 (2)0.050 (2)0.048 (2)−0.0141 (18)−0.0105 (16)−0.0056 (16)
C10.055 (2)0.042 (2)0.051 (3)−0.009 (2)−0.016 (2)−0.005 (2)
C20.048 (2)0.040 (2)0.054 (3)−0.012 (2)−0.011 (2)−0.0103 (19)
C30.040 (2)0.030 (2)0.045 (2)−0.0054 (17)−0.0114 (17)−0.0080 (17)
C40.040 (2)0.031 (2)0.047 (2)−0.0052 (17)−0.0103 (18)−0.0046 (17)
C50.047 (2)0.038 (2)0.048 (2)−0.0086 (19)−0.0135 (19)−0.0034 (18)
C60.057 (3)0.057 (3)0.044 (2)−0.015 (2)−0.009 (2)−0.001 (2)
C70.051 (3)0.063 (3)0.063 (3)−0.025 (2)−0.006 (2)0.004 (2)
C80.052 (3)0.058 (3)0.061 (3)−0.022 (2)−0.013 (2)−0.003 (2)
C90.041 (2)0.037 (2)0.052 (2)−0.0097 (18)−0.0105 (19)−0.0048 (18)
C100.051 (2)0.045 (3)0.061 (3)−0.013 (2)−0.020 (2)−0.010 (2)
C110.048 (2)0.040 (2)0.047 (2)−0.0108 (19)−0.0140 (19)−0.0057 (18)
C120.043 (2)0.038 (2)0.051 (2)−0.0127 (19)−0.0055 (18)−0.0070 (18)
C130.080 (3)0.073 (3)0.061 (3)−0.033 (3)−0.026 (2)−0.008 (2)
C140.153 (5)0.167 (6)0.049 (3)−0.115 (5)−0.034 (3)0.005 (3)
C150.160 (6)0.143 (6)0.069 (4)−0.065 (5)−0.007 (4)−0.024 (4)
C160.165 (6)0.123 (6)0.108 (5)−0.057 (5)−0.010 (4)−0.044 (4)
C170.053 (2)0.061 (3)0.065 (3)−0.012 (2)−0.022 (2)−0.021 (2)
C180.062 (3)0.060 (3)0.060 (3)−0.024 (2)−0.018 (2)−0.016 (2)
C190.086 (3)0.062 (3)0.097 (4)−0.006 (3)−0.037 (3)−0.021 (3)
C200.091 (3)0.094 (4)0.065 (3)−0.016 (3)−0.031 (3)−0.029 (3)
C210.048 (2)0.051 (3)0.066 (3)−0.006 (2)−0.020 (2)−0.007 (2)
C220.045 (2)0.047 (3)0.064 (3)−0.012 (2)−0.008 (2)−0.014 (2)
C230.041 (2)0.039 (2)0.054 (3)−0.0058 (19)−0.0110 (19)−0.0098 (19)
C240.039 (2)0.033 (2)0.061 (3)0.0009 (18)−0.016 (2)−0.0060 (19)
C250.043 (2)0.039 (2)0.070 (3)−0.004 (2)−0.020 (2)−0.005 (2)
C260.055 (3)0.057 (3)0.079 (3)−0.011 (2)−0.031 (2)−0.006 (2)
C270.048 (3)0.060 (3)0.090 (4)−0.018 (2)−0.022 (3)−0.004 (3)
C280.048 (3)0.057 (3)0.078 (3)−0.015 (2)−0.015 (2)0.001 (2)
C290.040 (2)0.038 (2)0.066 (3)−0.0065 (19)−0.013 (2)−0.004 (2)
C300.045 (2)0.049 (3)0.064 (3)−0.008 (2)−0.006 (2)−0.003 (2)
C310.050 (2)0.036 (2)0.060 (3)−0.006 (2)−0.012 (2)−0.004 (2)
C320.044 (2)0.043 (2)0.067 (3)−0.012 (2)−0.011 (2)−0.014 (2)
C330.080 (3)0.082 (4)0.062 (3)−0.021 (3)−0.005 (3)−0.006 (3)
C340.163 (6)0.124 (5)0.058 (3)−0.052 (5)−0.001 (4)−0.018 (3)
C350.190 (7)0.125 (6)0.086 (5)−0.025 (6)0.024 (5)−0.009 (4)
C360.196 (9)0.188 (9)0.203 (8)−0.089 (7)0.074 (7)−0.090 (7)
C370.063 (3)0.053 (3)0.057 (3)−0.019 (2)−0.010 (2)−0.001 (2)
C380.055 (3)0.063 (3)0.052 (3)−0.025 (2)−0.005 (2)−0.005 (2)
C390.064 (3)0.074 (4)0.080 (3)−0.011 (3)0.000 (3)−0.009 (3)
C400.103 (4)0.092 (4)0.048 (3)−0.034 (3)−0.016 (3)−0.009 (2)
O1—C11.216 (4)C17—C181.515 (5)
O2—C21.222 (4)C17—H17A0.9700
O3—C211.209 (4)C17—H17B0.9700
O4—C221.218 (4)C18—H18A0.9700
N1—C21.406 (4)C18—H18B0.9700
N1—C11.406 (4)C19—H19A0.9600
N1—C171.469 (4)C19—H19B0.9600
N2—C111.375 (4)C19—H19C0.9600
N2—C131.442 (5)C20—H20A0.9600
N2—H20.86 (2)C20—H20B0.9600
N3—C181.455 (5)C20—H20C0.9600
N3—C201.466 (4)C21—C251.481 (5)
N3—C191.466 (5)C22—C231.478 (5)
N4—C221.391 (5)C23—C321.347 (5)
N4—C211.404 (5)C23—C241.411 (5)
N4—C371.475 (4)C24—C251.407 (5)
N5—C311.372 (5)C24—C291.417 (5)
N5—C331.443 (5)C25—C261.391 (5)
N5—H50.85 (2)C26—C271.400 (5)
N6—C381.444 (5)C26—H260.9300
N6—C401.463 (4)C27—C281.366 (5)
N6—C391.468 (5)C27—H270.9300
C1—C51.480 (5)C28—C291.409 (5)
C2—C31.473 (5)C28—H280.9300
C3—C121.351 (4)C29—C301.410 (5)
C3—C41.412 (4)C30—C311.382 (5)
C4—C51.401 (5)C30—H300.9300
C4—C91.415 (5)C31—C321.426 (5)
C5—C61.380 (5)C32—H320.9300
C6—C71.400 (5)C33—C341.467 (6)
C6—H60.9300C33—H33A0.9700
C7—C81.365 (5)C33—H33B0.9700
C7—H70.9300C34—C351.514 (7)
C8—C91.408 (5)C34—H34A0.9700
C8—H80.9300C34—H34B0.9700
C9—C101.416 (5)C35—C361.413 (8)
C10—C111.375 (5)C35—H35A0.9700
C10—H100.9300C35—H35B0.9700
C11—C121.419 (5)C36—H36A0.9600
C12—H120.9300C36—H36B0.9600
C13—C141.550 (6)C36—H36C0.9600
C13—H13A0.9700C37—C381.527 (5)
C13—H13B0.9700C37—H37A0.9700
C14—C151.453 (7)C37—H37B0.9700
C14—H14A0.9700C38—H38A0.9700
C14—H14B0.9700C38—H38B0.9700
C15—C161.476 (7)C39—H39A0.9600
C15—H15A0.9700C39—H39B0.9600
C15—H15B0.9700C39—H39C0.9600
C16—H16A0.9600C40—H40A0.9600
C16—H16B0.9600C40—H40B0.9600
C16—H16C0.9600C40—H40C0.9600
C2—N1—C1124.9 (3)N3—C19—H19C109.5
C2—N1—C17116.3 (3)H19A—C19—H19C109.5
C1—N1—C17118.7 (3)H19B—C19—H19C109.5
C11—N2—C13124.1 (3)N3—C20—H20A109.5
C11—N2—H2113 (3)N3—C20—H20B109.5
C13—N2—H2118 (3)H20A—C20—H20B109.5
C18—N3—C20110.6 (3)N3—C20—H20C109.5
C18—N3—C19108.1 (3)H20A—C20—H20C109.5
C20—N3—C19109.0 (3)H20B—C20—H20C109.5
C22—N4—C21125.5 (3)O3—C21—N4120.5 (4)
C22—N4—C37115.9 (3)O3—C21—C25123.8 (4)
C21—N4—C37118.4 (3)N4—C21—C25115.7 (4)
C31—N5—C33122.4 (4)O4—C22—N4120.6 (4)
C31—N5—H5113 (3)O4—C22—C23122.0 (4)
C33—N5—H5120 (3)N4—C22—C23117.4 (4)
C38—N6—C40111.6 (3)C32—C23—C24120.6 (3)
C38—N6—C39109.5 (3)C32—C23—C22120.1 (4)
C40—N6—C39108.7 (3)C24—C23—C22119.3 (4)
O1—C1—N1120.0 (4)C25—C24—C23121.0 (3)
O1—C1—C5123.7 (4)C25—C24—C29120.2 (4)
N1—C1—C5116.3 (4)C23—C24—C29118.8 (4)
O2—C2—N1120.0 (4)C26—C25—C24120.0 (4)
O2—C2—C3123.2 (4)C26—C25—C21119.2 (4)
N1—C2—C3116.9 (3)C24—C25—C21120.8 (4)
C12—C3—C4120.1 (3)C25—C26—C27119.5 (4)
C12—C3—C2119.6 (3)C25—C26—H26120.3
C4—C3—C2120.3 (3)C27—C26—H26120.3
C5—C4—C3120.7 (3)C28—C27—C26121.1 (4)
C5—C4—C9120.5 (3)C28—C27—H27119.4
C3—C4—C9118.7 (3)C26—C27—H27119.4
C6—C5—C4120.3 (4)C27—C28—C29121.0 (4)
C6—C5—C1118.8 (4)C27—C28—H28119.5
C4—C5—C1120.9 (3)C29—C28—H28119.5
C5—C6—C7119.4 (4)C28—C29—C30122.7 (4)
C5—C6—H6120.3C28—C29—C24118.2 (4)
C7—C6—H6120.3C30—C29—C24119.1 (4)
C8—C7—C6120.7 (4)C31—C30—C29121.7 (4)
C8—C7—H7119.6C31—C30—H30119.1
C6—C7—H7119.6C29—C30—H30119.1
C7—C8—C9121.5 (4)N5—C31—C30123.8 (4)
C7—C8—H8119.2N5—C31—C32118.8 (4)
C9—C8—H8119.2C30—C31—C32117.4 (4)
C8—C9—C4117.5 (4)C23—C32—C31122.3 (4)
C8—C9—C10123.0 (4)C23—C32—H32118.8
C4—C9—C10119.6 (3)C31—C32—H32118.8
C11—C10—C9121.1 (4)N5—C33—C34112.5 (4)
C11—C10—H10119.5N5—C33—H33A109.1
C9—C10—H10119.5C34—C33—H33A109.1
C10—C11—N2124.3 (4)N5—C33—H33B109.1
C10—C11—C12118.0 (4)C34—C33—H33B109.1
N2—C11—C12117.7 (3)H33A—C33—H33B107.8
C3—C12—C11122.6 (3)C33—C34—C35114.7 (5)
C3—C12—H12118.7C33—C34—H34A108.6
C11—C12—H12118.7C35—C34—H34A108.6
N2—C13—C14109.9 (3)C33—C34—H34B108.6
N2—C13—H13A109.7C35—C34—H34B108.6
C14—C13—H13A109.7H34A—C34—H34B107.6
N2—C13—H13B109.7C36—C35—C34114.9 (6)
C14—C13—H13B109.7C36—C35—H35A108.5
H13A—C13—H13B108.2C34—C35—H35A108.5
C15—C14—C13116.4 (4)C36—C35—H35B108.5
C15—C14—H14A108.2C34—C35—H35B108.5
C13—C14—H14A108.2H35A—C35—H35B107.5
C15—C14—H14B108.2C35—C36—H36A109.5
C13—C14—H14B108.2C35—C36—H36B109.5
H14A—C14—H14B107.3H36A—C36—H36B109.5
C14—C15—C16116.1 (5)C35—C36—H36C109.5
C14—C15—H15A108.3H36A—C36—H36C109.5
C16—C15—H15A108.3H36B—C36—H36C109.5
C14—C15—H15B108.3N4—C37—C38113.2 (3)
C16—C15—H15B108.3N4—C37—H37A108.9
H15A—C15—H15B107.4C38—C37—H37A108.9
C15—C16—H16A109.5N4—C37—H37B108.9
C15—C16—H16B109.5C38—C37—H37B108.9
H16A—C16—H16B109.5H37A—C37—H37B107.8
C15—C16—H16C109.5N6—C38—C37114.1 (3)
H16A—C16—H16C109.5N6—C38—H38A108.7
H16B—C16—H16C109.5C37—C38—H38A108.7
N1—C17—C18113.6 (3)N6—C38—H38B108.7
N1—C17—H17A108.9C37—C38—H38B108.7
C18—C17—H17A108.9H38A—C38—H38B107.6
N1—C17—H17B108.9N6—C39—H39A109.5
C18—C17—H17B108.9N6—C39—H39B109.5
H17A—C17—H17B107.7H39A—C39—H39B109.5
N3—C18—C17114.7 (3)N6—C39—H39C109.5
N3—C18—H18A108.6H39A—C39—H39C109.5
C17—C18—H18A108.6H39B—C39—H39C109.5
N3—C18—H18B108.6N6—C40—H40A109.5
C17—C18—H18B108.6N6—C40—H40B109.5
H18A—C18—H18B107.6H40A—C40—H40B109.5
N3—C19—H19A109.5N6—C40—H40C109.5
N3—C19—H19B109.5H40A—C40—H40C109.5
H19A—C19—H19B109.5H40B—C40—H40C109.5
C2—N1—C1—O1−175.7 (3)C22—N4—C21—O3−178.5 (4)
C17—N1—C1—O1−0.1 (5)C37—N4—C21—O3−2.9 (6)
C2—N1—C1—C54.2 (5)C22—N4—C21—C251.3 (5)
C17—N1—C1—C5179.8 (3)C37—N4—C21—C25177.0 (3)
C1—N1—C2—O2176.4 (3)C21—N4—C22—O4175.8 (4)
C17—N1—C2—O20.8 (5)C37—N4—C22—O40.1 (5)
C1—N1—C2—C3−4.5 (5)C21—N4—C22—C23−4.9 (5)
C17—N1—C2—C3179.8 (3)C37—N4—C22—C23179.4 (3)
O2—C2—C3—C121.6 (5)O4—C22—C23—C324.1 (6)
N1—C2—C3—C12−177.4 (3)N4—C22—C23—C32−175.2 (3)
O2—C2—C3—C4−178.8 (3)O4—C22—C23—C24−175.7 (4)
N1—C2—C3—C42.2 (5)N4—C22—C23—C245.0 (5)
C12—C3—C4—C5179.6 (3)C32—C23—C24—C25178.3 (3)
C2—C3—C4—C50.0 (5)C22—C23—C24—C25−1.9 (5)
C12—C3—C4—C9−0.2 (5)C32—C23—C24—C29−2.7 (5)
C2—C3—C4—C9−179.8 (3)C22—C23—C24—C29177.1 (3)
C3—C4—C5—C6−179.8 (3)C23—C24—C25—C26179.1 (3)
C9—C4—C5—C60.0 (5)C29—C24—C25—C260.1 (5)
C3—C4—C5—C1−0.3 (5)C23—C24—C25—C21−1.8 (5)
C9—C4—C5—C1179.5 (3)C29—C24—C25—C21179.2 (3)
O1—C1—C5—C6−2.2 (6)O3—C21—C25—C261.1 (6)
N1—C1—C5—C6177.9 (3)N4—C21—C25—C26−178.7 (3)
O1—C1—C5—C4178.3 (4)O3—C21—C25—C24−178.0 (4)
N1—C1—C5—C4−1.6 (5)N4—C21—C25—C242.1 (5)
C4—C5—C6—C7−0.1 (6)C24—C25—C26—C27−1.0 (6)
C1—C5—C6—C7−179.6 (3)C21—C25—C26—C27179.9 (4)
C5—C6—C7—C80.3 (6)C25—C26—C27—C280.8 (6)
C6—C7—C8—C9−0.4 (6)C26—C27—C28—C290.3 (6)
C7—C8—C9—C40.2 (6)C27—C28—C29—C30178.5 (4)
C7—C8—C9—C10−179.9 (4)C27—C28—C29—C24−1.1 (6)
C5—C4—C9—C8−0.1 (5)C25—C24—C29—C280.9 (5)
C3—C4—C9—C8179.8 (3)C23—C24—C29—C28−178.1 (3)
C5—C4—C9—C10−179.9 (3)C25—C24—C29—C30−178.8 (3)
C3—C4—C9—C10−0.1 (5)C23—C24—C29—C302.2 (5)
C8—C9—C10—C11−179.1 (4)C28—C29—C30—C31−179.4 (4)
C4—C9—C10—C110.7 (5)C24—C29—C30—C310.3 (6)
C9—C10—C11—N2−178.0 (3)C33—N5—C31—C30−3.5 (6)
C9—C10—C11—C12−1.1 (5)C33—N5—C31—C32178.4 (4)
C13—N2—C11—C10−3.9 (6)C29—C30—C31—N5179.6 (4)
C13—N2—C11—C12179.2 (4)C29—C30—C31—C32−2.3 (6)
C4—C3—C12—C11−0.2 (5)C24—C23—C32—C310.6 (6)
C2—C3—C12—C11179.4 (3)C22—C23—C32—C31−179.2 (3)
C10—C11—C12—C30.8 (5)N5—C31—C32—C23−179.9 (4)
N2—C11—C12—C3178.0 (3)C30—C31—C32—C231.9 (6)
C11—N2—C13—C14164.1 (4)C31—N5—C33—C34176.3 (4)
N2—C13—C14—C15−170.6 (5)N5—C33—C34—C35−179.2 (5)
C13—C14—C15—C1661.5 (8)C33—C34—C35—C3693.2 (8)
C2—N1—C17—C18−79.6 (4)C22—N4—C37—C38−77.6 (4)
C1—N1—C17—C18104.4 (4)C21—N4—C37—C38106.3 (4)
C20—N3—C18—C17−68.8 (4)C40—N6—C38—C37−68.5 (4)
C19—N3—C18—C17172.0 (3)C39—N6—C38—C37171.0 (3)
N1—C17—C18—N3−69.1 (4)N4—C37—C38—N6−70.1 (4)
D—H···AD—HH···AD···AD—H···A
N2—H2···N60.86 (2)2.33 (2)3.176 (5)173 (3)
N5—H5···N30.85 (2)2.37 (2)3.220 (5)172 (4)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯N60.86 (2)2.33 (2)3.176 (5)173 (3)
N5—H5⋯N30.85 (2)2.37 (2)3.220 (5)172 (4)
  6 in total

Review 1.  Intercalators as anticancer drugs.

Authors:  M F Braña; M Cacho; A Gradillas; B de Pascual-Teresa; A Ramos
Journal:  Curr Pharm Des       Date:  2001-11       Impact factor: 3.116

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

Review 3.  Naphthalimides as anti-cancer agents: synthesis and biological activity.

Authors:  M F Braña; A Ramos
Journal:  Curr Med Chem Anticancer Agents       Date:  2001-11

4.  Synthesis of new amonafide analogues via coupling reaction and their cytotoxic evaluation and DNA-binding studies.

Authors:  Lijuan Xie; Yufang Xu; Fang Wang; Jianwen Liu; Xuhong Qian; Jingnan Cui
Journal:  Bioorg Med Chem       Date:  2008-11-27       Impact factor: 3.641

5.  Phase I study of amonafide dosing based on acetylator phenotype.

Authors:  M J Ratain; R Mick; F Berezin; L Janisch; R L Schilsky; N J Vogelzang; L B Lane
Journal:  Cancer Res       Date:  1993-05-15       Impact factor: 12.701

6.  Paradoxical relationship between acetylator phenotype and amonafide toxicity.

Authors:  M J Ratain; R Mick; F Berezin; L Janisch; R L Schilsky; S F Williams; J Smiddy
Journal:  Clin Pharmacol Ther       Date:  1991-11       Impact factor: 6.875

  6 in total

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