Literature DB >> 21579486

2-Iodo-5-nitro-thio-phene.

Xing Yan Xu1, Gang Huang, Xiang Chao Zeng, Fang Hu.   

Abstract

The title compound, C(4)H(2)INO(2)S, was synthesized by nitration of iodo-thio-phene with acetyl nitrate. The molecule is essentially planar, withthe nitro group tilted by 1.78 (19)° and the iodine atom displaced by 0.0233 (2) Å with respect to the thiophene ring. In the crystal structure, adjacent mol-ecules are linked through weak I⋯O inter-actions [3.039 (2)Å], forming chains extending along the b axis.

Entities:  

Year:  2010        PMID: 21579486      PMCID: PMC2979622          DOI: 10.1107/S1600536810017356

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the bioactivity of thio­phene derivatives, see: Wilson et al. (2010 ▶); Rudra et al. (2007 ▶); Altman et al. (2008 ▶); Morley et al. (2006 ▶).

Experimental

Crystal data

C4H2INO2S M = 255.03 Monoclinic, a = 9.195 (2) Å b = 9.727 (2) Å c = 7.6714 (17) Å β = 105.043 (4)° V = 662.6 (2) Å3 Z = 4 Mo Kα radiation μ = 5.07 mm−1 T = 110 K 0.48 × 0.29 × 0.08 mm

Data collection

Bruker SMART 1K CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.195, T max = 0.687 3264 measured reflections 1419 independent reflections 1294 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.025 wR(F 2) = 0.065 S = 1.09 1419 reflections 82 parameters H-atom parameters constrained Δρmax = 1.65 e Å−3 Δρmin = −1.07 e Å−3 Data collection: SMART (Bruker, 1999 ▶); cell refinement: SAINT-Plus (Bruker, 1999 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810017356/rz2440sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810017356/rz2440Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C4H2INO2SF(000) = 472
Mr = 255.03Dx = 2.556 Mg m3
Monoclinic, P21/cMelting point: 348 K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 9.195 (2) ÅCell parameters from 2600 reflections
b = 9.727 (2) Åθ = 2.3–27.0°
c = 7.6714 (17) ŵ = 5.07 mm1
β = 105.043 (4)°T = 110 K
V = 662.6 (2) Å3Plate, pale yellow
Z = 40.48 × 0.29 × 0.08 mm
Bruker SMART 1K CCD area-detector diffractometer1419 independent reflections
Radiation source: fine-focus sealed tube1294 reflections with I > 2σ(I)
graphiteRint = 0.022
φ and ω scansθmax = 27.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −11→10
Tmin = 0.195, Tmax = 0.687k = −12→6
3264 measured reflectionsl = −9→9
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.025Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.065H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.0417P)2 + 0.2502P] where P = (Fo2 + 2Fc2)/3
1419 reflections(Δ/σ)max = 0.001
82 parametersΔρmax = 1.65 e Å3
0 restraintsΔρmin = −1.07 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
I10.742893 (19)0.45070 (2)−0.00911 (2)0.01661 (11)
S10.63408 (8)0.77403 (7)−0.09375 (9)0.01554 (17)
C10.7728 (3)0.6618 (3)0.0128 (3)0.0154 (6)
O20.5694 (3)1.06507 (19)−0.1375 (3)0.0224 (5)
N10.6975 (3)1.0473 (2)−0.0419 (3)0.0173 (5)
C20.9003 (3)0.7266 (3)0.1129 (4)0.0176 (6)
H20.98730.67960.18050.021*
C30.8865 (3)0.8712 (3)0.1034 (3)0.0171 (6)
H30.96270.93360.16300.021*
O10.7865 (3)1.1411 (2)0.0229 (3)0.0257 (5)
C40.7496 (3)0.9090 (4)−0.0027 (3)0.0148 (6)
U11U22U33U12U13U23
I10.02192 (16)0.00881 (16)0.01937 (15)0.00103 (5)0.00585 (10)0.00003 (5)
S10.0171 (4)0.0104 (3)0.0176 (3)0.0009 (2)0.0018 (3)−0.0006 (2)
C10.0216 (14)0.0082 (14)0.0184 (14)0.0040 (10)0.0087 (11)0.0022 (9)
O20.0232 (12)0.0178 (10)0.0254 (11)0.0056 (8)0.0047 (9)0.0048 (8)
N10.0215 (15)0.0148 (13)0.0163 (12)0.0016 (9)0.0060 (11)0.0011 (8)
C20.0165 (14)0.0168 (13)0.0196 (14)0.0021 (10)0.0046 (11)0.0006 (10)
C30.0176 (14)0.0132 (13)0.0201 (14)−0.0027 (10)0.0042 (11)−0.0028 (10)
O10.0331 (12)0.0094 (11)0.0324 (12)−0.0033 (9)0.0044 (10)−0.0019 (8)
C40.0206 (18)0.0087 (16)0.0167 (16)−0.0007 (9)0.0079 (13)−0.0021 (8)
I1—C12.073 (3)N1—C41.433 (4)
S1—C11.716 (3)C2—C31.412 (4)
S1—C41.719 (3)C2—H20.9500
C1—C21.376 (4)C3—C41.361 (4)
O2—N11.227 (4)C3—H30.9500
N1—O11.241 (3)
C1—S1—C489.32 (14)C1—C2—H2124.0
C2—C1—S1113.2 (2)C3—C2—H2124.0
C2—C1—I1125.1 (2)C4—C3—C2110.9 (3)
S1—C1—I1121.68 (16)C4—C3—H3124.5
O2—N1—O1124.5 (2)C2—C3—H3124.5
O2—N1—C4118.3 (2)C3—C4—N1125.9 (3)
O1—N1—C4117.2 (3)C3—C4—S1114.5 (3)
C1—C2—C3112.0 (3)N1—C4—S1119.59 (19)
C4—S1—C1—C20.2 (2)O2—N1—C4—C3−178.6 (2)
C4—S1—C1—I1179.18 (13)O1—N1—C4—C31.9 (4)
S1—C1—C2—C3−0.2 (3)O2—N1—C4—S11.5 (3)
I1—C1—C2—C3−179.22 (17)O1—N1—C4—S1−178.06 (17)
C1—C2—C3—C40.2 (3)C1—S1—C4—C30.0 (2)
C2—C3—C4—N1180.0 (2)C1—S1—C4—N1179.92 (18)
C2—C3—C4—S1−0.1 (3)
  3 in total

1.  Studies on the biological activity of some nitrothiophenes.

Authors:  John O Morley; Thomas P Matthews
Journal:  Org Biomol Chem       Date:  2005-12-15       Impact factor: 3.876

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Synthesis and antibacterial activity of potent heterocyclic oxazolidinones and the identification of RBx 8700.

Authors:  Sonali Rudra; Ajay Yadav; A V S Raja Rao; A S S V Srinivas; Manisha Pandya; Pragya Bhateja; Tarun Mathur; Sunita Malhotra; Ashok Rattan; Mohammed Salman; Anita Mehta; Ian A Cliffe; Biswajit Das
Journal:  Bioorg Med Chem Lett       Date:  2007-10-22       Impact factor: 2.823

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.