| Literature DB >> 21579447 |
B Thimme Gowda, Miroslav Tokarčík, Vinola Z Rodrigues, Jozef Kožíšek, Hartmut Fuess.
Abstract
IN THE TITLE COMPOUND (SYSTEMATIC NAME: N,N'-diphenyl-octanediamide), C(20)H(24)N(2)O(2), the two phenyl rings make an inter-planar angle of 76.5 (2)°. The crystal structure is stabilized by inter-molecular N-H⋯O hydrogen bonds, which link the mol-ecules into chains running along the b axis. The crystal studied was non-merohedrally twinned, the fractional contribution of the minor twin component being 0.203 (2).Entities:
Year: 2010 PMID: 21579447 PMCID: PMC2979493 DOI: 10.1107/S1600536810017344
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C20H24N2O2 | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 7864 reflections |
| θ = 1.9–27.4° | |
| µ = 0.08 mm−1 | |
| β = 96.517 (4)° | Plate, colourless |
| 0.58 × 0.33 × 0.05 mm | |
| Oxford Diffraction Gemini R CCD diffractometer | 3027 independent reflections |
| graphite | 2524 reflections with |
| Detector resolution: 10.434 pixels mm-1 | |
| ω scans | θmax = 25.0°, θmin = 2.2° |
| Absorption correction: analytical ( | |
| 27788 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3027 reflections | (Δ/σ)max < 0.001 |
| 224 parameters | Δρmax = 0.21 e Å−3 |
| 2 restraints | Δρmin = −0.22 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| C1 | 0.0479 (2) | 0.3940 (7) | 0.55627 (10) | 0.0357 (9) | |
| C2 | 0.0772 (2) | 0.2805 (8) | 0.52403 (10) | 0.0392 (9) | |
| H2A | 0.0358 | 0.2378 | 0.5067 | 0.047* | |
| H2B | 0.1029 | 0.1158 | 0.5306 | 0.047* | |
| C3 | 0.1291 (2) | 0.4621 (8) | 0.50714 (10) | 0.0398 (9) | |
| H3A | 0.1732 | 0.489 | 0.5235 | 0.048* | |
| H3B | 0.1055 | 0.6337 | 0.5028 | 0.048* | |
| C4 | 0.1511 (2) | 0.3560 (8) | 0.47276 (10) | 0.0398 (9) | |
| H4A | 0.1068 | 0.3257 | 0.4567 | 0.048* | |
| H4B | 0.1754 | 0.1857 | 0.4772 | 0.048* | |
| C5 | 0.2020 (2) | 0.5373 (8) | 0.45507 (9) | 0.0415 (10) | |
| H5A | 0.247 | 0.5627 | 0.4709 | 0.05* | |
| H5B | 0.1784 | 0.7095 | 0.4514 | 0.05* | |
| C6 | 0.2222 (2) | 0.4363 (8) | 0.42003 (10) | 0.0417 (10) | |
| H6A | 0.2457 | 0.2638 | 0.4235 | 0.05* | |
| H6B | 0.1775 | 0.4133 | 0.404 | 0.05* | |
| C7 | 0.2735 (2) | 0.6215 (8) | 0.40346 (10) | 0.0416 (10) | |
| H7A | 0.3186 | 0.6418 | 0.4194 | 0.05* | |
| H7B | 0.2505 | 0.795 | 0.4004 | 0.05* | |
| C8 | 0.2930 (2) | 0.5254 (7) | 0.36811 (10) | 0.0388 (9) | |
| C9 | −0.0140 (2) | 0.2611 (7) | 0.60821 (9) | 0.0343 (8) | |
| C10 | −0.0691 (2) | 0.0877 (9) | 0.61530 (10) | 0.0459 (10) | |
| H10 | −0.0822 | −0.0522 | 0.5999 | 0.055* | |
| C11 | −0.1051 (3) | 0.1199 (10) | 0.64514 (11) | 0.0565 (12) | |
| H11 | −0.1425 | 0.0034 | 0.6497 | 0.068* | |
| C12 | −0.0851 (3) | 0.3247 (10) | 0.66783 (11) | 0.0595 (13) | |
| H12 | −0.109 | 0.3482 | 0.6879 | 0.071* | |
| C13 | −0.0299 (3) | 0.4945 (9) | 0.66109 (10) | 0.0574 (12) | |
| H13 | −0.0168 | 0.633 | 0.6767 | 0.069* | |
| C14 | 0.0070 (2) | 0.4649 (8) | 0.63144 (10) | 0.0439 (10) | |
| H14 | 0.0451 | 0.5798 | 0.6273 | 0.053* | |
| C15 | 0.3338 (2) | 0.6863 (7) | 0.31213 (10) | 0.0382 (9) | |
| C16 | 0.3837 (2) | 0.4959 (9) | 0.30577 (11) | 0.0517 (11) | |
| H16 | 0.401 | 0.3772 | 0.3235 | 0.062* | |
| C17 | 0.4088 (3) | 0.4791 (11) | 0.27288 (13) | 0.0676 (14) | |
| H17 | 0.4425 | 0.3479 | 0.2685 | 0.081* | |
| C18 | 0.3837 (3) | 0.6570 (11) | 0.24667 (12) | 0.0695 (15) | |
| H18 | 0.4011 | 0.6476 | 0.2247 | 0.083* | |
| C19 | 0.3336 (3) | 0.8462 (11) | 0.25299 (13) | 0.0738 (16) | |
| H19 | 0.3157 | 0.9633 | 0.2352 | 0.089* | |
| C20 | 0.3091 (3) | 0.8644 (9) | 0.28602 (12) | 0.0565 (12) | |
| H20 | 0.2759 | 0.9971 | 0.2905 | 0.068* | |
| N1 | 0.02190 (19) | 0.2112 (6) | 0.57763 (8) | 0.0381 (8) | |
| H1N | 0.029 (2) | 0.055 (6) | 0.5713 (11) | 0.046* | |
| N2 | 0.3100 (2) | 0.7191 (6) | 0.34624 (9) | 0.0405 (8) | |
| H2N | 0.302 (2) | 0.868 (6) | 0.3547 (11) | 0.049* | |
| O1 | 0.04456 (18) | 0.6348 (5) | 0.56139 (8) | 0.0503 (8) | |
| O2 | 0.2948 (2) | 0.2890 (6) | 0.36057 (9) | 0.0652 (10) |
| C1 | 0.041 (2) | 0.029 (2) | 0.038 (2) | 0.0025 (17) | 0.0096 (17) | −0.0019 (17) |
| C2 | 0.050 (2) | 0.032 (2) | 0.038 (2) | −0.0012 (18) | 0.0144 (18) | −0.0054 (17) |
| C3 | 0.046 (2) | 0.037 (2) | 0.038 (2) | −0.0056 (18) | 0.0141 (17) | −0.0075 (17) |
| C4 | 0.044 (2) | 0.038 (2) | 0.039 (2) | −0.0018 (18) | 0.0125 (17) | −0.0048 (17) |
| C5 | 0.052 (2) | 0.038 (2) | 0.037 (2) | −0.0057 (19) | 0.0163 (18) | −0.0080 (18) |
| C6 | 0.055 (2) | 0.031 (2) | 0.042 (2) | −0.0081 (18) | 0.0166 (19) | −0.0062 (17) |
| C7 | 0.051 (2) | 0.033 (2) | 0.042 (2) | −0.0046 (19) | 0.0131 (19) | −0.0038 (18) |
| C8 | 0.050 (2) | 0.026 (2) | 0.044 (2) | −0.0011 (18) | 0.0215 (19) | −0.0072 (17) |
| C9 | 0.039 (2) | 0.0295 (19) | 0.0347 (19) | 0.0036 (17) | 0.0069 (16) | 0.0021 (15) |
| C10 | 0.057 (3) | 0.043 (2) | 0.039 (2) | −0.007 (2) | 0.0131 (19) | −0.0037 (18) |
| C11 | 0.060 (3) | 0.058 (3) | 0.056 (3) | 0.002 (2) | 0.029 (2) | 0.011 (2) |
| C12 | 0.079 (3) | 0.062 (3) | 0.042 (2) | 0.013 (3) | 0.030 (2) | 0.005 (2) |
| C13 | 0.089 (3) | 0.047 (3) | 0.037 (2) | 0.005 (3) | 0.011 (2) | −0.009 (2) |
| C14 | 0.051 (2) | 0.040 (2) | 0.041 (2) | −0.0034 (19) | 0.0109 (19) | −0.0051 (19) |
| C15 | 0.046 (2) | 0.030 (2) | 0.041 (2) | −0.0092 (17) | 0.0134 (18) | −0.0034 (17) |
| C16 | 0.060 (3) | 0.049 (2) | 0.050 (2) | 0.008 (2) | 0.021 (2) | 0.002 (2) |
| C17 | 0.081 (3) | 0.060 (3) | 0.070 (3) | 0.005 (3) | 0.042 (3) | −0.009 (3) |
| C18 | 0.102 (4) | 0.066 (3) | 0.046 (3) | −0.018 (3) | 0.035 (3) | −0.009 (3) |
| C19 | 0.113 (5) | 0.063 (3) | 0.047 (3) | −0.005 (3) | 0.019 (3) | 0.013 (3) |
| C20 | 0.072 (3) | 0.042 (3) | 0.058 (3) | 0.002 (2) | 0.017 (2) | 0.004 (2) |
| N1 | 0.0527 (19) | 0.0262 (16) | 0.0384 (17) | −0.0009 (15) | 0.0174 (15) | −0.0018 (14) |
| N2 | 0.054 (2) | 0.0263 (17) | 0.0446 (19) | −0.0037 (15) | 0.0198 (16) | −0.0016 (15) |
| O1 | 0.072 (2) | 0.0293 (15) | 0.0548 (18) | 0.0002 (14) | 0.0316 (16) | −0.0006 (13) |
| O2 | 0.110 (3) | 0.0280 (16) | 0.067 (2) | −0.0056 (17) | 0.051 (2) | −0.0043 (14) |
| C1—O1 | 1.229 (5) | C9—N1 | 1.423 (5) |
| C1—N1 | 1.350 (5) | C10—C11 | 1.386 (6) |
| C1—C2 | 1.508 (5) | C10—H10 | 0.93 |
| C2—C3 | 1.510 (5) | C11—C12 | 1.368 (7) |
| C2—H2A | 0.97 | C11—H11 | 0.93 |
| C2—H2B | 0.97 | C12—C13 | 1.366 (7) |
| C3—C4 | 1.512 (5) | C12—H12 | 0.93 |
| C3—H3A | 0.97 | C13—C14 | 1.388 (6) |
| C3—H3B | 0.97 | C13—H13 | 0.93 |
| C4—C5 | 1.513 (5) | C14—H14 | 0.93 |
| C4—H4A | 0.97 | C15—C16 | 1.362 (6) |
| C4—H4B | 0.97 | C15—C20 | 1.377 (6) |
| C5—C6 | 1.514 (5) | C15—N2 | 1.427 (5) |
| C5—H5A | 0.97 | C16—C17 | 1.385 (6) |
| C5—H5B | 0.97 | C16—H16 | 0.93 |
| C6—C7 | 1.509 (5) | C17—C18 | 1.381 (7) |
| C6—H6A | 0.97 | C17—H17 | 0.93 |
| C6—H6B | 0.97 | C18—C19 | 1.360 (8) |
| C7—C8 | 1.512 (5) | C18—H18 | 0.93 |
| C7—H7A | 0.97 | C19—C20 | 1.387 (7) |
| C7—H7B | 0.97 | C19—H19 | 0.93 |
| C8—O2 | 1.225 (5) | C20—H20 | 0.93 |
| C8—N2 | 1.342 (5) | N1—H1N | 0.84 (3) |
| C9—C10 | 1.380 (6) | N2—H2N | 0.84 (3) |
| C9—C14 | 1.381 (5) | ||
| O1—C1—N1 | 123.3 (3) | C10—C9—C14 | 119.9 (3) |
| O1—C1—C2 | 122.1 (3) | C10—C9—N1 | 117.5 (3) |
| N1—C1—C2 | 114.5 (3) | C14—C9—N1 | 122.5 (3) |
| C1—C2—C3 | 114.6 (3) | C9—C10—C11 | 120.7 (4) |
| C1—C2—H2A | 108.6 | C9—C10—H10 | 119.7 |
| C3—C2—H2A | 108.6 | C11—C10—H10 | 119.7 |
| C1—C2—H2B | 108.6 | C12—C11—C10 | 119.3 (4) |
| C3—C2—H2B | 108.6 | C12—C11—H11 | 120.3 |
| H2A—C2—H2B | 107.6 | C10—C11—H11 | 120.3 |
| C2—C3—C4 | 113.4 (3) | C13—C12—C11 | 120.1 (4) |
| C2—C3—H3A | 108.9 | C13—C12—H12 | 119.9 |
| C4—C3—H3A | 108.9 | C11—C12—H12 | 119.9 |
| C2—C3—H3B | 108.9 | C12—C13—C14 | 121.4 (4) |
| C4—C3—H3B | 108.9 | C12—C13—H13 | 119.3 |
| H3A—C3—H3B | 107.7 | C14—C13—H13 | 119.3 |
| C3—C4—C5 | 114.2 (3) | C9—C14—C13 | 118.5 (4) |
| C3—C4—H4A | 108.7 | C9—C14—H14 | 120.7 |
| C5—C4—H4A | 108.7 | C13—C14—H14 | 120.7 |
| C3—C4—H4B | 108.7 | C16—C15—C20 | 120.0 (4) |
| C5—C4—H4B | 108.7 | C16—C15—N2 | 121.5 (4) |
| H4A—C4—H4B | 107.6 | C20—C15—N2 | 118.4 (4) |
| C4—C5—C6 | 114.5 (3) | C15—C16—C17 | 120.0 (4) |
| C4—C5—H5A | 108.6 | C15—C16—H16 | 120 |
| C6—C5—H5A | 108.6 | C17—C16—H16 | 120 |
| C4—C5—H5B | 108.6 | C18—C17—C16 | 120.0 (5) |
| C6—C5—H5B | 108.6 | C18—C17—H17 | 120 |
| H5A—C5—H5B | 107.6 | C16—C17—H17 | 120 |
| C7—C6—C5 | 112.8 (3) | C19—C18—C17 | 119.9 (4) |
| C7—C6—H6A | 109 | C19—C18—H18 | 120 |
| C5—C6—H6A | 109 | C17—C18—H18 | 120 |
| C7—C6—H6B | 109 | C18—C19—C20 | 120.0 (5) |
| C5—C6—H6B | 109 | C18—C19—H19 | 120 |
| H6A—C6—H6B | 107.8 | C20—C19—H19 | 120 |
| C6—C7—C8 | 113.3 (3) | C15—C20—C19 | 120.1 (5) |
| C6—C7—H7A | 108.9 | C15—C20—H20 | 119.9 |
| C8—C7—H7A | 108.9 | C19—C20—H20 | 119.9 |
| C6—C7—H7B | 108.9 | C1—N1—C9 | 126.9 (3) |
| C8—C7—H7B | 108.9 | C1—N1—H1N | 113 (3) |
| H7A—C7—H7B | 107.7 | C9—N1—H1N | 120 (3) |
| O2—C8—N2 | 123.0 (4) | C8—N2—C15 | 126.8 (3) |
| O2—C8—C7 | 122.3 (4) | C8—N2—H2N | 110 (3) |
| N2—C8—C7 | 114.6 (3) | C15—N2—H2N | 123 (3) |
| O1—C1—C2—C3 | 23.9 (6) | C20—C15—C16—C17 | −0.9 (7) |
| N1—C1—C2—C3 | −159.8 (3) | N2—C15—C16—C17 | −176.4 (4) |
| C1—C2—C3—C4 | −173.8 (3) | C15—C16—C17—C18 | 0.7 (8) |
| C2—C3—C4—C5 | 179.0 (4) | C16—C17—C18—C19 | −1.0 (8) |
| C3—C4—C5—C6 | −178.1 (4) | C17—C18—C19—C20 | 1.7 (8) |
| C4—C5—C6—C7 | −179.4 (4) | C16—C15—C20—C19 | 1.5 (7) |
| C5—C6—C7—C8 | −178.9 (4) | N2—C15—C20—C19 | 177.1 (4) |
| C6—C7—C8—O2 | −29.1 (6) | C18—C19—C20—C15 | −1.9 (8) |
| C6—C7—C8—N2 | 152.7 (4) | O1—C1—N1—C9 | 1.5 (7) |
| C14—C9—C10—C11 | 1.7 (6) | C2—C1—N1—C9 | −174.8 (4) |
| N1—C9—C10—C11 | 178.2 (4) | C10—C9—N1—C1 | 145.5 (4) |
| C9—C10—C11—C12 | −0.6 (7) | C14—C9—N1—C1 | −38.0 (6) |
| C10—C11—C12—C13 | −0.2 (7) | O2—C8—N2—C15 | −1.4 (7) |
| C11—C12—C13—C14 | 0.0 (7) | C7—C8—N2—C15 | 176.8 (4) |
| C10—C9—C14—C13 | −2.0 (6) | C16—C15—N2—C8 | −42.2 (6) |
| N1—C9—C14—C13 | −178.3 (4) | C20—C15—N2—C8 | 142.3 (4) |
| C12—C13—C14—C9 | 1.1 (7) |
| H··· | ||||
| N1—H1N···O1i | 0.84 (3) | 2.17 (3) | 3.004 (4) | 173 (4) |
| N2—H2N···O2ii | 0.84 (3) | 2.13 (3) | 2.937 (4) | 161 (4) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.84 (3) | 2.17 (3) | 3.004 (4) | 173 (4) |
| N2—H2 | 0.84 (3) | 2.13 (3) | 2.937 (4) | 161 (4) |
Symmetry codes: (i) ; (ii) .