Literature DB >> 21578794

Methyl N-phenyl-succinamate.

B Thimme Gowda, Sabine Foro, B S Saraswathi, Hartmut Fuess.   

Abstract

In the structure of the title compound, C(11)H(13)NO(3), the conformations of the N-H and C=O bonds in the amide fragment are trans to each other. In the crystal, mol-ecules are linked into a 2(1) helical chain that propagates along the c axis through N-H⋯O inter-actions.

Entities:  

Year:  2009        PMID: 21578794      PMCID: PMC2971872          DOI: 10.1107/S160053680904690X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Gowda et al. (2007 ▶, 2009 ▶); Jones et al. (1990 ▶).

Experimental

Crystal data

C11H13NO3 M = 207.22 Orthorhombic, a = 15.973 (2) Å b = 12.600 (1) Å c = 5.2438 (9) Å V = 1055.4 (2) Å3 Z = 4 Mo Kα radiation μ = 0.10 mm−1 T = 299 K 0.50 × 0.12 × 0.08 mm

Data collection

Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009 ▶) T min = 0.954, T max = 0.992 2584 measured reflections 1184 independent reflections 774 reflections with I > 2σ(I) R int = 0.023

Refinement

R[F 2 > 2σ(F 2)] = 0.049 wR(F 2) = 0.096 S = 1.13 1184 reflections 140 parameters 1 restraint H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.11 e Å−3 Δρmin = −0.11 e Å−3 Data collection: CrysAlis CCD (Oxford Diffraction, 2009 ▶); cell refinement: CrysAlis RED (Oxford Diffraction, 2009 ▶); data reduction: CrysAlis RED; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680904690X/pk2203sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680904690X/pk2203Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C11H13NO3F(000) = 440
Mr = 207.22Dx = 1.304 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 930 reflections
a = 15.973 (2) Åθ = 2.6–27.5°
b = 12.600 (1) ŵ = 0.10 mm1
c = 5.2438 (9) ÅT = 299 K
V = 1055.4 (2) Å3Rod, colourless
Z = 40.50 × 0.12 × 0.08 mm
Oxford Diffraction Xcalibur diffractometer with a Sapphire CCD detector1184 independent reflections
Radiation source: fine-focus sealed tube774 reflections with I > 2σ(I)
graphiteRint = 0.023
Rotation method data acquisition using ω and φ scansθmax = 26.4°, θmin = 2.6°
Absorption correction: multi-scan (CrysAlis RED; Oxford Diffraction, 2009)h = −19→16
Tmin = 0.954, Tmax = 0.992k = −10→15
2584 measured reflectionsl = −6→5
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.049Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.096H atoms treated by a mixture of independent and constrained refinement
S = 1.13w = 1/[σ2(Fo2) + (0.0356P)2 + 0.1073P] where P = (Fo2 + 2Fc2)/3
1184 reflections(Δ/σ)max = 0.032
140 parametersΔρmax = 0.11 e Å3
1 restraintΔρmin = −0.11 e Å3
Experimental. CrysAlis RED (Oxford Diffraction, 2009) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm.
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.12956 (15)0.16946 (18)0.1342 (6)0.0713 (7)
O20.13057 (14)−0.08851 (18)0.1486 (6)0.0664 (7)
O30.26104 (16)−0.09216 (19)−0.0009 (6)0.0751 (8)
N1−0.00368 (18)0.1938 (2)−0.0025 (7)0.0556 (8)
H1N−0.039 (2)0.171 (3)−0.112 (7)0.067*
C1−0.03455 (19)0.2709 (2)0.1695 (7)0.0465 (8)
C2−0.1192 (2)0.2940 (3)0.1633 (9)0.0629 (10)
H2−0.15340.25930.04660.076*
C3−0.1535 (2)0.3670 (3)0.3259 (10)0.0702 (11)
H3−0.21050.38150.31780.084*
C4−0.1043 (3)0.4192 (3)0.5015 (10)0.0676 (10)
H4−0.12780.46750.61480.081*
C5−0.0201 (3)0.3984 (3)0.5061 (10)0.0692 (10)
H50.01390.43390.62220.083*
C60.0152 (2)0.3251 (3)0.3392 (8)0.0619 (10)
H60.07260.31270.34260.074*
C70.0728 (2)0.1478 (2)−0.0132 (8)0.0499 (8)
C80.0820 (2)0.0666 (3)−0.2223 (7)0.0602 (10)
H8A0.07300.1009−0.38560.072*
H8B0.03910.0128−0.20160.072*
C90.1666 (2)0.0136 (3)−0.2240 (7)0.0629 (10)
H9A0.1726−0.0260−0.38170.076*
H9B0.20960.0681−0.22240.076*
C100.1815 (2)−0.0602 (2)−0.0043 (8)0.0528 (9)
C110.2848 (2)−0.1655 (3)0.2016 (10)0.0906 (16)
H11A0.2554−0.23130.17990.136*
H11B0.2708−0.13530.36400.136*
H11C0.3440−0.17830.19410.136*
U11U22U33U12U13U23
O10.0574 (14)0.0822 (16)0.0745 (17)0.0086 (12)−0.0170 (17)−0.0237 (19)
O20.0594 (14)0.0779 (16)0.0619 (15)0.0023 (13)0.0225 (17)0.0105 (18)
O30.0616 (17)0.0773 (16)0.0863 (18)0.0099 (13)0.0306 (18)0.0165 (19)
N10.0538 (19)0.0599 (17)0.0530 (18)−0.0006 (14)−0.0167 (17)−0.0114 (19)
C10.055 (2)0.0429 (17)0.0418 (18)0.0002 (16)−0.004 (2)0.0039 (19)
C20.053 (2)0.067 (2)0.069 (2)−0.0030 (18)−0.010 (3)−0.002 (3)
C30.057 (3)0.072 (3)0.081 (3)0.0072 (19)0.005 (3)0.004 (3)
C40.076 (3)0.065 (2)0.062 (2)0.011 (2)0.008 (3)−0.003 (3)
C50.081 (3)0.065 (2)0.061 (2)0.005 (2)−0.016 (3)−0.015 (2)
C60.059 (2)0.063 (2)0.064 (2)0.0056 (18)−0.016 (2)−0.008 (2)
C70.056 (2)0.0482 (18)0.0455 (19)−0.0040 (17)0.000 (2)0.001 (2)
C80.072 (2)0.064 (2)0.045 (2)−0.0006 (19)0.001 (2)−0.003 (2)
C90.075 (2)0.067 (2)0.047 (2)−0.003 (2)0.018 (2)−0.004 (2)
C100.057 (2)0.0481 (18)0.053 (2)−0.0006 (17)0.018 (2)−0.008 (2)
C110.073 (3)0.093 (3)0.106 (4)0.022 (2)0.024 (3)0.022 (3)
O1—C71.222 (4)C4—H40.9300
O2—C101.196 (4)C5—C61.393 (5)
O3—C101.333 (4)C5—H50.9300
O3—C111.458 (5)C6—H60.9300
N1—C71.354 (4)C7—C81.507 (5)
N1—C11.415 (4)C8—C91.508 (5)
N1—H1N0.85 (4)C8—H8A0.9700
C1—C61.375 (4)C8—H8B0.9700
C1—C21.383 (4)C9—C101.500 (5)
C2—C31.369 (5)C9—H9A0.9700
C2—H20.9300C9—H9B0.9700
C3—C41.377 (6)C11—H11A0.9600
C3—H30.9300C11—H11B0.9600
C4—C51.370 (5)C11—H11C0.9600
C10—O3—C11116.7 (3)O1—C7—C8122.7 (3)
C7—N1—C1129.4 (3)N1—C7—C8114.1 (3)
C7—N1—H1N115 (2)C7—C8—C9113.1 (3)
C1—N1—H1N115 (2)C7—C8—H8A109.0
C6—C1—C2118.4 (3)C9—C8—H8A109.0
C6—C1—N1123.5 (3)C7—C8—H8B109.0
C2—C1—N1118.0 (3)C9—C8—H8B109.0
C3—C2—C1121.2 (4)H8A—C8—H8B107.8
C3—C2—H2119.4C10—C9—C8114.3 (3)
C1—C2—H2119.4C10—C9—H9A108.7
C2—C3—C4120.6 (4)C8—C9—H9A108.7
C2—C3—H3119.7C10—C9—H9B108.7
C4—C3—H3119.7C8—C9—H9B108.7
C5—C4—C3118.7 (4)H9A—C9—H9B107.6
C5—C4—H4120.6O2—C10—O3123.3 (4)
C3—C4—H4120.6O2—C10—C9126.3 (3)
C4—C5—C6120.9 (4)O3—C10—C9110.4 (3)
C4—C5—H5119.5O3—C11—H11A109.5
C6—C5—H5119.5O3—C11—H11B109.5
C1—C6—C5120.1 (3)H11A—C11—H11B109.5
C1—C6—H6120.0O3—C11—H11C109.5
C5—C6—H6120.0H11A—C11—H11C109.5
O1—C7—N1123.2 (4)H11B—C11—H11C109.5
C7—N1—C1—C610.3 (6)C1—N1—C7—O1−0.8 (6)
C7—N1—C1—C2−170.7 (4)C1—N1—C7—C8178.8 (3)
C6—C1—C2—C3−1.6 (6)O1—C7—C8—C91.7 (5)
N1—C1—C2—C3179.4 (4)N1—C7—C8—C9−177.9 (3)
C1—C2—C3—C4−0.3 (6)C7—C8—C9—C1070.2 (4)
C2—C3—C4—C51.6 (6)C11—O3—C10—O20.2 (5)
C3—C4—C5—C6−0.9 (6)C11—O3—C10—C9−179.4 (3)
C2—C1—C6—C52.2 (5)C8—C9—C10—O28.9 (5)
N1—C1—C6—C5−178.8 (4)C8—C9—C10—O3−171.5 (3)
C4—C5—C6—C1−1.0 (6)
D—H···AD—HH···AD···AD—H···A
N1—H1N···O2i0.85 (4)2.20 (4)3.036 (4)170 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1N⋯O2i 0.85 (4)2.20 (4)3.036 (4)170 (3)

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Methyl N-(4-chlorophenyl)succinamate.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hiromitsu Terao; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-01-28

3.  N-(4-Chloro-phen-yl)succinamic acid.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-11

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  3 in total

1.  Methyl N-(2,3-dichloro-phen-yl)succinamate.

Authors:  B Thimme Gowda; Sabine Foro; B S Saraswathi; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-04-28

2.  N,N'-Diphenyl-suberamide.

Authors:  B Thimme Gowda; Miroslav Tokarčík; Vinola Z Rodrigues; Jozef Kožíšek; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-05-15

3.  Methyl 3-[(3,5-dichloro-anilino)carbon-yl]propionate.

Authors:  B S Saraswathi; B Thimme Gowda; Sabine Foro; Hartmut Fuess
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-16
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.