Literature DB >> 21579317

(2,2'-Bipyridine-κN,N')dibromido(dimethyl sulfoxide-κO)zinc(II).

Majid Esmhosseini1.   

Abstract

In the mol-ecule of the title compound, [ZnBr(2)(C(10)H(8)N(2))(C(2)H(6)OS)], the Zn(II) atom is five-coordinated in a distorted trigonal-bipyramidal configuration by two N atoms from one 2,2'-bipyridine, one O atom from one dimethyl-sulfoxide molecule and two Br atoms. Inter-molecular π-π stacking between parallel pyridine rings [face-to-face distance 3.32 (4) Å] and C-H⋯Br and C-H⋯O hydrogen-bonding interactions are present in the crystal structure.

Entities:  

Year:  2010        PMID: 21579317      PMCID: PMC2979554          DOI: 10.1107/S1600536810017551

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related structures, see: Ahmadi et al. (2008 ▶); Alizadeh, Kalateh, Ebadi et al. (2009 ▶); Alizadeh, Kalateh, Khoshtarkib et al. (2009 ▶); Alizadeh, Khoshtarkib et al. (2009 ▶); Blake et al. (2007 ▶); Khan & Tuck (1984 ▶); Marjani et al. (2007 ▶); Khalighi et al. (2008 ▶).

Experimental

Crystal data

[ZnBr2(C10n class="Species">H8N2)(C2H6OS)] M = 459.51 Monoclinic, a = 9.4802 (10) Å b = 8.3449 (7) Å c = 19.989 (2) Å β = 95.185 (8)° V = 1574.9 (3) Å3 Z = 4 Mo Kα radiation μ = 6.76 mm−1 T = 298 K 0.30 × 0.25 × 0.20 mm

Data collection

Bruker SMART CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2001 ▶) T min = 0.148, T max = 0.260 12674 measured reflections 4245 independent reflections 3229 reflections with I > 2σ(I) R int = 0.078

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.140 S = 1.13 4245 reflections 175 parameters H-atom parameters constrained Δρmax = 1.08 e Å−3 Δρmin = −1.46 e Å−3 Data collection: SMART (Bruker, 1998 ▶); cell refinement: SAINT (Bruker, 1998 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810017551/xu2761sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810017551/xu2761Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[ZnBr2(C10H8N2)(C2H6OS)]F(000) = 896
Mr = 459.51Dx = 1.938 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 653 reflections
a = 9.4802 (10) Åθ = 2.1–29.2°
b = 8.3449 (7) ŵ = 6.76 mm1
c = 19.989 (2) ÅT = 298 K
β = 95.185 (8)°Block, colorless
V = 1574.9 (3) Å30.30 × 0.25 × 0.20 mm
Z = 4
Bruker SMART CCD area-detector diffractometer4245 independent reflections
Radiation source: fine-focus sealed tube3229 reflections with I > 2σ(I)
graphiteRint = 0.078
φ and ω scansθmax = 29.2°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Bruker, 2001)h = −12→12
Tmin = 0.148, Tmax = 0.260k = −11→11
12674 measured reflectionsl = −27→25
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.058H-atom parameters constrained
wR(F2) = 0.140w = 1/[σ2(Fo2) + (0.0602P)2 + 1.8278P] where P = (Fo2 + 2Fc2)/3
S = 1.13(Δ/σ)max = 0.005
4245 reflectionsΔρmax = 1.08 e Å3
175 parametersΔρmin = −1.46 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0087 (7)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.5556 (5)0.1151 (7)0.3831 (3)0.0377 (10)
H10.52860.09800.33780.045*
C20.6783 (5)0.0424 (7)0.4117 (3)0.0425 (12)
H20.7333−0.02080.38590.051*
C30.7166 (6)0.0660 (7)0.4788 (3)0.0462 (13)
H30.79820.01850.49920.055*
C40.6335 (5)0.1603 (6)0.5155 (3)0.0383 (10)
H40.65810.17720.56110.046*
C50.5129 (5)0.2297 (6)0.4840 (2)0.0295 (9)
C60.4154 (5)0.3323 (6)0.5190 (2)0.0311 (9)
C70.4311 (6)0.3600 (7)0.5883 (2)0.0406 (11)
H70.50560.31370.61500.049*
C80.3346 (6)0.4570 (7)0.6166 (3)0.0432 (12)
H80.34330.47710.66250.052*
C90.2254 (5)0.5234 (7)0.5759 (3)0.0422 (12)
H90.15890.58890.59390.051*
C100.2162 (5)0.4915 (7)0.5085 (3)0.0395 (11)
H100.14210.53660.48120.047*
C110.2234 (7)0.7783 (10)0.2635 (4)0.0621 (18)
H11A0.31670.74120.25640.075*
H11B0.23020.86830.29350.075*
H11C0.17500.80990.22130.075*
C12−0.0109 (6)0.7414 (10)0.3256 (4)0.0650 (19)
H12A0.02810.82810.35290.078*
H12B−0.06980.67650.35140.078*
H12C−0.06650.78380.28720.078*
N10.4750 (4)0.2084 (5)0.41813 (19)0.0324 (8)
N20.3090 (4)0.3984 (5)0.48005 (19)0.0324 (8)
O10.2163 (4)0.5774 (5)0.36384 (18)0.0440 (9)
Zn10.29167 (5)0.33824 (7)0.37552 (3)0.03244 (16)
Br10.37506 (6)0.34269 (8)0.26199 (3)0.04918 (19)
Br20.07887 (6)0.17861 (8)0.37356 (3)0.05171 (19)
S10.12833 (14)0.62307 (17)0.29876 (7)0.0413 (3)
U11U22U33U12U13U23
C10.040 (2)0.040 (3)0.033 (2)0.006 (2)0.0043 (19)−0.001 (2)
C20.042 (3)0.038 (3)0.049 (3)0.009 (2)0.012 (2)−0.001 (2)
C30.041 (3)0.044 (3)0.052 (3)0.009 (2)−0.002 (2)0.008 (3)
C40.038 (2)0.041 (3)0.035 (2)−0.001 (2)−0.0051 (18)0.004 (2)
C50.032 (2)0.028 (2)0.028 (2)−0.0061 (17)0.0007 (16)0.0022 (17)
C60.0297 (19)0.031 (2)0.032 (2)−0.0062 (17)0.0025 (16)−0.0013 (19)
C70.043 (3)0.047 (3)0.031 (2)−0.006 (2)−0.0026 (19)−0.001 (2)
C80.052 (3)0.049 (3)0.029 (2)−0.008 (2)0.008 (2)−0.003 (2)
C90.046 (3)0.040 (3)0.043 (3)0.000 (2)0.018 (2)−0.001 (2)
C100.037 (2)0.043 (3)0.039 (2)0.005 (2)0.0079 (19)0.004 (2)
C110.047 (3)0.080 (5)0.060 (4)−0.005 (3)0.010 (3)0.026 (4)
C120.040 (3)0.071 (5)0.086 (5)0.006 (3)0.014 (3)0.022 (4)
N10.0333 (18)0.034 (2)0.0299 (18)0.0003 (15)0.0015 (14)0.0026 (16)
N20.0278 (17)0.039 (2)0.0309 (18)−0.0022 (15)0.0029 (14)−0.0005 (17)
O10.053 (2)0.041 (2)0.0352 (18)0.0093 (16)−0.0089 (15)0.0020 (16)
Zn10.0303 (3)0.0378 (3)0.0285 (3)0.0010 (2)−0.00125 (19)0.0005 (2)
Br10.0467 (3)0.0704 (4)0.0309 (2)0.0102 (3)0.0059 (2)0.0055 (3)
Br20.0373 (3)0.0562 (4)0.0604 (4)−0.0122 (2)−0.0025 (2)−0.0009 (3)
S10.0409 (6)0.0409 (7)0.0397 (6)0.0015 (5)−0.0084 (5)0.0036 (5)
C1—N11.333 (6)C9—H90.9300
C1—C21.388 (7)C10—N21.338 (6)
C1—H10.9300C10—H100.9300
C2—C31.372 (8)C11—S11.761 (7)
C2—H20.9300C11—H11A0.9600
C3—C41.372 (8)C11—H11B0.9600
C3—H30.9300C11—H11C0.9600
C4—C51.382 (6)C12—S11.770 (7)
C4—H40.9300C12—H12A0.9600
C5—N11.345 (6)C12—H12B0.9600
C5—C61.480 (6)C12—H12C0.9600
C6—N21.336 (6)Zn1—N12.157 (4)
C6—C71.401 (6)Zn1—N22.141 (4)
C7—C81.380 (8)S1—O11.529 (4)
C7—H70.9300Zn1—O12.125 (4)
C8—C91.374 (8)Zn1—Br12.4701 (8)
C8—H80.9300Zn1—Br22.4148 (8)
C9—C101.369 (7)
N1—C1—C2122.6 (5)S1—C11—H11B109.5
N1—C1—H1118.7H11A—C11—H11B109.5
C2—C1—H1118.7S1—C11—H11C109.5
C3—C2—C1118.5 (5)H11A—C11—H11C109.5
C3—C2—H2120.7H11B—C11—H11C109.5
C1—C2—H2120.7S1—C12—H12A109.5
C2—C3—C4119.4 (5)S1—C12—H12B109.5
C2—C3—H3120.3H12A—C12—H12B109.5
C4—C3—H3120.3S1—C12—H12C109.5
C3—C4—C5119.2 (5)H12A—C12—H12C109.5
C3—C4—H4120.4H12B—C12—H12C109.5
C5—C4—H4120.4C1—N1—C5118.4 (4)
N1—C5—C4121.8 (5)C1—N1—Zn1124.5 (3)
N1—C5—C6114.5 (4)C5—N1—Zn1117.1 (3)
C4—C5—C6123.6 (4)C6—N2—C10118.9 (4)
N2—C6—C7121.0 (4)C6—N2—Zn1117.3 (3)
N2—C6—C5115.8 (4)C10—N2—Zn1123.7 (3)
C7—C6—C5123.2 (4)S1—O1—Zn1118.7 (2)
C8—C7—C6119.1 (5)O1—Zn1—N283.24 (15)
C8—C7—H7120.4O1—Zn1—N1139.98 (15)
C6—C7—H7120.4N2—Zn1—N175.19 (15)
C9—C8—C7119.1 (5)O1—Zn1—Br2104.13 (11)
C9—C8—H8120.4N2—Zn1—Br297.80 (11)
C7—C8—H8120.4N1—Zn1—Br2111.81 (11)
C10—C9—C8118.8 (5)O1—Zn1—Br190.99 (11)
C10—C9—H9120.6N2—Zn1—Br1152.93 (11)
C8—C9—H9120.6N1—Zn1—Br193.27 (11)
N2—C10—C9123.1 (5)Br2—Zn1—Br1109.25 (3)
N2—C10—H10118.5O1—S1—C11105.3 (3)
C9—C10—H10118.5O1—S1—C12104.2 (3)
S1—C11—H11A109.5C11—S1—C1297.7 (4)
N1—C1—C2—C31.0 (9)C9—C10—N2—C60.4 (8)
C1—C2—C3—C4−0.2 (9)C9—C10—N2—Zn1177.1 (4)
C2—C3—C4—C5−0.1 (8)S1—O1—Zn1—N2−159.5 (3)
C3—C4—C5—N1−0.5 (8)S1—O1—Zn1—N1143.3 (2)
C3—C4—C5—C6179.5 (5)S1—O1—Zn1—Br2−63.2 (3)
N1—C5—C6—N2−4.3 (6)S1—O1—Zn1—Br147.0 (3)
C4—C5—C6—N2175.7 (4)C6—N2—Zn1—O1−146.3 (4)
N1—C5—C6—C7175.5 (4)C10—N2—Zn1—O136.9 (4)
C4—C5—C6—C7−4.5 (7)C6—N2—Zn1—N1−0.3 (3)
N2—C6—C7—C80.1 (8)C10—N2—Zn1—N1−177.1 (4)
C5—C6—C7—C8−179.7 (5)C6—N2—Zn1—Br2110.3 (3)
C6—C7—C8—C90.2 (8)C10—N2—Zn1—Br2−66.5 (4)
C7—C8—C9—C10−0.2 (8)C6—N2—Zn1—Br1−67.5 (5)
C8—C9—C10—N2−0.1 (8)C10—N2—Zn1—Br1115.7 (4)
C2—C1—N1—C5−1.5 (8)C1—N1—Zn1—O1−119.4 (4)
C2—C1—N1—Zn1175.5 (4)C5—N1—Zn1—O157.6 (4)
C4—C5—N1—C11.2 (7)C1—N1—Zn1—N2−179.1 (4)
C6—C5—N1—C1−178.8 (4)C5—N1—Zn1—N2−2.2 (3)
C4—C5—N1—Zn1−175.9 (4)C1—N1—Zn1—Br288.3 (4)
C6—C5—N1—Zn14.0 (5)C5—N1—Zn1—Br2−94.7 (3)
C7—C6—N2—C10−0.4 (7)C1—N1—Zn1—Br1−24.0 (4)
C5—C6—N2—C10179.4 (4)C5—N1—Zn1—Br1153.0 (3)
C7—C6—N2—Zn1−177.3 (4)Zn1—O1—S1—C11−120.4 (4)
C5—C6—N2—Zn12.5 (5)Zn1—O1—S1—C12137.3 (3)
D—H···AD—HH···AD···AD—H···A
C1—H1···Br10.932.863.413 (6)119
C10—H10···O10.932.532.979 (7)110
Table 1

Selected bond lengths (Å)

Zn1—N12.157 (4)
Zn1—N22.141 (4)
Zn1—O12.125 (4)
Zn1—Br12.4701 (8)
Zn1—Br22.4148 (8)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯Br10.932.863.413 (6)119
C10—H10⋯O10.932.532.979 (7)110
  6 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Dibromido(6,6'-dimethyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Robabeh Alizadeh; Zeinab Khoshtarkib; Katayoon Chegeni; Amin Ebadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-07

3.  Dichlorido(5,5'-dimethyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Aida Khalighi; Roya Ahmadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-08-30

4.  Dichlorido(6-methyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Roya Ahmadi; Khadijeh Kalateh; Amin Ebadi; Vahid Amani; Hamid Reza Khavasi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-13

5.  Dichlorido(6,6'-dimethyl-2,2'-bipyridine-κN,N')zinc(II).

Authors:  Robabeh Alizadeh; Khadijeh Kalateh; Amin Ebadi; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-09-26

6.  (6,6'-Dimethyl-2,2'-bipyridine-κN,N')diiodidozinc(II).

Authors:  Robabeh Alizadeh; Khadijeh Kalateh; Zeinab Khoshtarkib; Roya Ahmadi; Vahid Amani
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-28
  6 in total

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