Literature DB >> 21579261

Ethyl 2-(6-amino-5-cyano-3,4-dimethyl-2H,4H-pyrano[2,3-c]pyrazol-4-yl)acetate.

M Kannan, Kandhasamy Kumaravel, Gnanasambandam Vasuki, R Krishna.   

Abstract

In he title compound, C(13)H(16)N(4)O(3), the pyrazole ring is planar (r.m.s. deviation = 0.054 Å). The pyran ring is not planar; the mean plane makes a dihedral angle of 1.9 (1)° with the pyrazole ring. In the crystal structure, inter-molecular N-H⋯N and N-H⋯O inter-actions lead to a linear chain motif.

Entities:  

Year:  2010        PMID: 21579261      PMCID: PMC2979188          DOI: 10.1107/S1600536810015540

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For biological applications of pyrazole and pyran­opyrazole derivatives, see: Wamhoff et al. (1993 ▶).; Velaparthi et al. (2008 ▶); Magedov et al. (2007 ▶); Rovnyak et al. (1982 ▶). For the synthesis, see: Vasuki & Kumaravel (2008 ▶).

Experimental

Crystal data

C13H16N4O3 M = 276.30 Triclinic, a = 6.961 (5) Å b = 7.373 (5) Å c = 14.535 (5) Å α = 86.405 (5)° β = 85.183 (5)° γ = 65.726 (5)° V = 677.3 (7) Å3 Z = 2 Mo Kα radiation μ = 0.10 mm−1 T = 293 K 0.25 × 0.20 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker 2004 ▶) T min = 0.976, T max = 0.981 12811 measured reflections 2385 independent reflections 2130 reflections with I > 2σ(I) R int = 0.020

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.117 S = 1.02 2378 reflections 184 parameters H-atom parameters constrained Δρmax = 0.30 e Å−3 Δρmin = −0.26 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: APEX2 and SAINT (Bruker, 2004 ▶); data reduction: SAINT and XPREP (Bruker, 2004 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810015540/ng2761sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810015540/ng2761Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C13H16N4O3Z = 2
Mr = 276.30F(000) = 292
Triclinic, P1Dx = 1.355 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71069 Å
a = 6.961 (5) ÅCell parameters from 7682 reflections
b = 7.373 (5) Åθ = 2.8–32.8°
c = 14.535 (5) ŵ = 0.10 mm1
α = 86.405 (5)°T = 293 K
β = 85.183 (5)°Block, colourless
γ = 65.726 (5)°0.25 × 0.20 × 0.20 mm
V = 677.3 (7) Å3
Bruker Kappa APEXII CCD diffractometer2385 independent reflections
Radiation source: fine-focus sealed tube2130 reflections with I > 2σ(I)
graphiteRint = 0.020
Detector resolution: 0 pixels mm-1θmax = 25.0°, θmin = 2.8°
ω and φ scanh = −8→8
Absorption correction: multi-scan (SADABS; Bruker 2004)k = −8→8
Tmin = 0.976, Tmax = 0.981l = −17→17
12811 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.041Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.117H-atom parameters constrained
S = 1.02w = 1/[σ2(Fo2) + (0.0655P)2 + 0.2561P] where P = (Fo2 + 2Fc2)/3
2378 reflections(Δ/σ)max = 0.001
184 parametersΔρmax = 0.30 e Å3
0 restraintsΔρmin = −0.26 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.Some "bad" relections were omitted in the refinement.
xyzUiso*/Ueq
C10.4375 (2)0.8266 (2)0.84125 (10)0.0288 (3)
C20.3125 (2)0.7231 (2)0.86328 (9)0.0271 (3)
C30.2551 (2)0.6151 (2)0.79351 (9)0.0271 (3)
C40.3682 (2)0.6404 (2)0.70213 (9)0.0282 (3)
C50.4908 (2)0.7439 (2)0.68793 (10)0.0306 (3)
C60.0126 (2)0.7009 (2)0.78369 (10)0.0329 (3)
H6A−0.01640.62760.73750.040*
H6B−0.05630.68180.84200.040*
C7−0.0780 (2)0.9167 (2)0.75667 (11)0.0378 (4)
C8−0.1525 (3)1.1488 (3)0.62848 (17)0.0654 (6)
H8A−0.25281.24020.67240.078*
H8B−0.22171.16360.57150.078*
C90.0317 (5)1.1990 (4)0.6104 (3)0.1088 (12)
H9A0.08871.20230.66790.163*
H9B−0.01091.32710.57940.163*
H9C0.13751.10030.57220.163*
C100.2672 (2)0.7477 (2)0.95731 (10)0.0320 (3)
C110.1408 (3)0.6754 (3)1.02539 (11)0.0487 (5)
H11A0.21770.53561.03800.073*
H11B0.00910.69781.00060.073*
H11C0.11400.74611.08160.073*
C120.3282 (3)0.3931 (2)0.82003 (11)0.0385 (4)
H12A0.47800.33510.82610.058*
H12B0.29510.32700.77290.058*
H12C0.25740.37820.87770.058*
C130.3419 (2)0.5481 (2)0.62484 (10)0.0354 (4)
N10.4738 (2)0.9108 (2)0.91081 (8)0.0351 (3)
N20.3649 (2)0.8596 (2)0.98199 (8)0.0357 (3)
H20.35890.89541.03770.043*
N30.5923 (2)0.7662 (2)0.60839 (9)0.0474 (4)
H3A0.58310.71140.55940.057*
H3B0.66670.83520.60640.057*
N40.3189 (3)0.4715 (3)0.56322 (10)0.0555 (4)
O10.52556 (17)0.84545 (17)0.75515 (7)0.0367 (3)
O2−0.1338 (2)1.0482 (2)0.81014 (10)0.0659 (4)
O3−0.08990 (18)0.94621 (17)0.66504 (8)0.0450 (3)
U11U22U33U12U13U23
C10.0306 (7)0.0354 (7)0.0243 (7)−0.0169 (6)−0.0013 (5)−0.0047 (6)
C20.0271 (7)0.0322 (7)0.0246 (7)−0.0142 (6)−0.0018 (5)−0.0038 (5)
C30.0277 (7)0.0322 (7)0.0250 (7)−0.0153 (6)−0.0012 (5)−0.0050 (5)
C40.0269 (7)0.0353 (7)0.0253 (7)−0.0148 (6)−0.0007 (5)−0.0071 (6)
C50.0307 (7)0.0399 (8)0.0245 (7)−0.0172 (6)−0.0006 (6)−0.0069 (6)
C60.0291 (7)0.0450 (8)0.0312 (8)−0.0213 (6)0.0005 (6)−0.0068 (6)
C70.0250 (7)0.0454 (9)0.0434 (9)−0.0128 (6)−0.0036 (6)−0.0124 (7)
C80.0592 (12)0.0478 (11)0.0810 (15)−0.0144 (9)−0.0116 (11)0.0124 (10)
C90.096 (2)0.0740 (17)0.171 (3)−0.0526 (16)−0.029 (2)0.0415 (19)
C100.0376 (8)0.0365 (8)0.0267 (7)−0.0196 (6)−0.0016 (6)−0.0048 (6)
C110.0692 (12)0.0637 (11)0.0298 (8)−0.0450 (10)0.0083 (8)−0.0090 (8)
C120.0481 (9)0.0344 (8)0.0364 (8)−0.0197 (7)−0.0038 (7)−0.0028 (6)
C130.0362 (8)0.0488 (9)0.0289 (8)−0.0255 (7)0.0042 (6)−0.0088 (7)
N10.0430 (7)0.0457 (7)0.0273 (6)−0.0284 (6)−0.0011 (5)−0.0067 (5)
N20.0487 (8)0.0459 (7)0.0224 (6)−0.0286 (6)−0.0015 (5)−0.0069 (5)
N30.0591 (9)0.0738 (10)0.0300 (7)−0.0484 (8)0.0114 (6)−0.0162 (7)
N40.0675 (10)0.0859 (12)0.0357 (8)−0.0534 (9)0.0097 (7)−0.0243 (8)
O10.0446 (6)0.0537 (7)0.0266 (6)−0.0350 (5)0.0047 (4)−0.0106 (5)
O20.0652 (9)0.0518 (8)0.0677 (9)−0.0048 (7)−0.0160 (7)−0.0270 (7)
O30.0440 (7)0.0432 (6)0.0457 (7)−0.0163 (5)−0.0008 (5)−0.0005 (5)
C1—N11.3125 (19)C8—H8A0.9700
C1—O11.3714 (18)C8—H8B0.9700
C1—C21.383 (2)C9—H9A0.9600
C2—C101.383 (2)C9—H9B0.9600
C2—C31.5006 (19)C9—H9C0.9600
C3—C41.527 (2)C10—N21.346 (2)
C3—C121.535 (2)C10—C111.487 (2)
C3—C61.556 (2)C11—H11A0.9600
C4—C51.356 (2)C11—H11B0.9600
C4—C131.411 (2)C11—H11C0.9600
C5—N31.341 (2)C12—H12A0.9600
C5—O11.3616 (17)C12—H12B0.9600
C6—C71.490 (2)C12—H12C0.9600
C6—H6A0.9700C13—N41.144 (2)
C6—H6B0.9700N1—N21.3572 (18)
C7—O21.195 (2)N2—H20.8600
C7—O31.340 (2)N3—H3A0.8600
C8—O31.452 (2)N3—H3B0.8600
C8—C91.474 (4)
N1—C1—O1118.81 (13)H8A—C8—H8B108.0
N1—C1—C2115.28 (13)C8—C9—H9A109.5
O1—C1—C2125.90 (13)C8—C9—H9B109.5
C1—C2—C10103.21 (13)H9A—C9—H9B109.5
C1—C2—C3123.21 (13)C8—C9—H9C109.5
C10—C2—C3133.58 (13)H9A—C9—H9C109.5
C2—C3—C4105.90 (12)H9B—C9—H9C109.5
C2—C3—C12111.39 (12)N2—C10—C2106.01 (13)
C4—C3—C12109.91 (12)N2—C10—C11122.04 (14)
C2—C3—C6112.12 (11)C2—C10—C11131.95 (14)
C4—C3—C6110.22 (12)C10—C11—H11A109.5
C12—C3—C6107.33 (12)C10—C11—H11B109.5
C5—C4—C13116.78 (13)H11A—C11—H11B109.5
C5—C4—C3126.29 (13)C10—C11—H11C109.5
C13—C4—C3116.93 (13)H11A—C11—H11C109.5
N3—C5—C4126.98 (14)H11B—C11—H11C109.5
N3—C5—O1109.58 (13)C3—C12—H12A109.5
C4—C5—O1123.44 (13)C3—C12—H12B109.5
C7—C6—C3112.62 (12)H12A—C12—H12B109.5
C7—C6—H6A109.1C3—C12—H12C109.5
C3—C6—H6A109.1H12A—C12—H12C109.5
C7—C6—H6B109.1H12B—C12—H12C109.5
C3—C6—H6B109.1N4—C13—C4178.79 (17)
H6A—C6—H6B107.8C1—N1—N2101.70 (12)
O2—C7—O3123.82 (17)C10—N2—N1113.80 (12)
O2—C7—C6124.23 (16)C10—N2—H2123.1
O3—C7—C6111.94 (13)N1—N2—H2123.1
O3—C8—C9111.08 (18)C5—N3—H3A120.0
O3—C8—H8A109.4C5—N3—H3B120.0
C9—C8—H8A109.4H3A—N3—H3B120.0
O3—C8—H8B109.4C5—O1—C1115.14 (12)
C9—C8—H8B109.4C7—O3—C8117.56 (15)
N1—C1—C2—C100.13 (17)C12—C3—C6—C7−179.24 (12)
O1—C1—C2—C10179.38 (13)C3—C6—C7—O2−85.9 (2)
N1—C1—C2—C3−179.36 (12)C3—C6—C7—O394.18 (15)
O1—C1—C2—C3−0.1 (2)C1—C2—C10—N20.13 (16)
C1—C2—C3—C42.14 (18)C3—C2—C10—N2179.54 (14)
C10—C2—C3—C4−177.17 (15)C1—C2—C10—C11−179.84 (17)
C1—C2—C3—C12121.60 (15)C3—C2—C10—C11−0.4 (3)
C10—C2—C3—C12−57.7 (2)C5—C4—C13—N4169 (9)
C1—C2—C3—C6−118.10 (15)C3—C4—C13—N4−11 (9)
C10—C2—C3—C662.6 (2)O1—C1—N1—N2−179.63 (12)
C2—C3—C4—C5−1.37 (19)C2—C1—N1—N2−0.32 (17)
C12—C3—C4—C5−121.80 (16)C2—C10—N2—N1−0.35 (17)
C6—C3—C4—C5120.10 (16)C11—C10—N2—N1179.63 (15)
C2—C3—C4—C13178.97 (12)C1—N1—N2—C100.41 (17)
C12—C3—C4—C1358.54 (17)N3—C5—O1—C1−177.10 (12)
C6—C3—C4—C13−59.56 (17)C4—C5—O1—C13.8 (2)
C13—C4—C5—N3−0.9 (2)N1—C1—O1—C5176.23 (12)
C3—C4—C5—N3179.41 (14)C2—C1—O1—C5−3.0 (2)
C13—C4—C5—O1178.03 (13)O2—C7—O3—C87.0 (2)
C3—C4—C5—O1−1.6 (2)C6—C7—O3—C8−173.07 (14)
C2—C3—C6—C758.13 (16)C9—C8—O3—C787.2 (3)
C4—C3—C6—C7−59.57 (16)
D—H···AD—HH···AD···AD—H···A
N2—H2···O2i0.862.553.274 (2)142
N2—H2···N1ii0.862.372.956 (2)126
N3—H3A···N4iii0.862.193.012 (2)160
N3—H3B···O3iv0.862.403.192 (2)154
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H2⋯O2i0.862.553.274 (2)142
N2—H2⋯N1ii0.862.372.956 (2)126
N3—H3A⋯N4iii0.862.193.012 (2)160
N3—H3B⋯O3iv0.862.403.192 (2)154

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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