Literature DB >> 21579179

(E)-4-Nitro-benzaldehyde oxime.

Asghar Abbas, Safdar Hussain, Noureen Hafeez, Amir Badshah, Aurangzeb Hasan, Kong Mun Lo.   

Abstract

In the title compound, C(7)H(6)N(2)O(3), the planes containing the CNO and ONO atoms subtend dihedral angles of 5.47 (5) and 8.31 (5)°, respectively, with the benzene ring. In the crystal structure, inter-molecular O-H⋯N hydrogen bonds link the mol-ecules into centrosymmetric dimers with an R(2) (2)(6) graph-set motif.

Entities:  

Year:  2010        PMID: 21579179      PMCID: PMC2979095          DOI: 10.1107/S1600536810013978

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For oximes as therapeutic agents in organophospho­rus poisoning, see: Jokanovic et al. (2009 ▶); Marrs et al. (2006 ▶). For their use as protecting groups in organic synthesis, see: Greene et al. (1999 ▶); Shinada et al. (1995 ▶). For graph-set notation, see: Etter et al. (1990 ▶); Bernstein et al. (1995 ▶). For bond lengths in similar structures, see: Xing, Ding et al. (2007 ▶); Xing, Wang et al. (2007 ▶).

Experimental

Crystal data

C7H6N2O3 M = 166.14 Monoclinic, a = 3.7737 (2) Å b = 7.0363 (3) Å c = 28.6651 (14) Å β = 91.237 (3)° V = 760.96 (6) Å3 Z = 4 Mo Kα radiation μ = 0.12 mm−1 T = 296 K 0.49 × 0.41 × 0.16 mm

Data collection

Bruker APEXII CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.945, T max = 0.982 7222 measured reflections 1869 independent reflections 1340 reflections with I > 2σ(I) R int = 0.031

Refinement

R[F 2 > 2σ(F 2)] = 0.066 wR(F 2) = 0.175 S = 1.09 1869 reflections 110 parameters H-atom parameters constrained Δρmax = 0.20 e Å−3 Δρmin = −0.20 e Å−3 Data collection: APEX2 (Bruker, 2008 ▶); cell refinement: SAINT (Bruker, 2008 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: X-SEED (Barbour, 2001 ▶); software used to prepare material for publication: publCIF (Westrip, 2010 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810013978/hg2672sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810013978/hg2672Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C7H6N2O3F(000) = 344
Mr = 166.14Dx = 1.450 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 1727 reflections
a = 3.7737 (2) Åθ = 2.8–25.1°
b = 7.0363 (3) ŵ = 0.12 mm1
c = 28.6651 (14) ÅT = 296 K
β = 91.237 (3)°Block, colorless
V = 760.96 (6) Å30.49 × 0.41 × 0.16 mm
Z = 4
Bruker APEXII CCD area-detector diffractometer1869 independent reflections
Radiation source: fine-focus sealed tube1340 reflections with I > 2σ(I)
graphiteRint = 0.031
ω scansθmax = 28.2°, θmin = 2.8°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −5→4
Tmin = 0.945, Tmax = 0.982k = −9→9
7222 measured reflectionsl = −38→37
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.066Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.175H-atom parameters constrained
S = 1.09w = 1/[σ2(Fo2) + (0.060P)2 + 0.435P] where P = (Fo2 + 2Fc2)/3
1869 reflections(Δ/σ)max < 0.001
110 parametersΔρmax = 0.20 e Å3
0 restraintsΔρmin = −0.20 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O30.9103 (8)0.7939 (3)−0.02398 (6)0.0848 (8)
H30.96730.8950−0.03590.127*
O20.2494 (7)0.1865 (3)0.14956 (8)0.0857 (8)
N10.3651 (6)0.3009 (3)0.17705 (8)0.0575 (6)
N20.8746 (6)0.8191 (3)0.02418 (7)0.0562 (6)
C10.5229 (6)0.4774 (3)0.15885 (8)0.0425 (5)
C20.5707 (6)0.4913 (3)0.11163 (8)0.0426 (5)
H20.50920.39120.09190.051*
C30.7126 (6)0.6576 (3)0.09400 (8)0.0415 (5)
C70.7669 (7)0.6696 (3)0.04381 (9)0.0529 (6)
H70.72050.56290.02550.063*
C60.6116 (7)0.6200 (3)0.18954 (8)0.0509 (6)
H60.57880.60590.22140.061*
C50.7516 (7)0.7856 (3)0.17149 (9)0.0549 (6)
H50.81350.88500.19140.066*
C40.7997 (6)0.8040 (3)0.12444 (8)0.0474 (6)
H40.89220.91650.11280.057*
O10.3545 (8)0.2798 (4)0.21888 (8)0.1044 (9)
U11U22U33U12U13U23
O30.143 (2)0.0654 (13)0.0469 (11)−0.0300 (13)0.0171 (12)0.0024 (9)
O20.1130 (19)0.0472 (11)0.0966 (17)−0.0354 (12)−0.0037 (13)0.0100 (10)
N10.0583 (13)0.0447 (11)0.0694 (15)−0.0043 (10)0.0033 (11)0.0160 (10)
N20.0732 (15)0.0490 (11)0.0467 (11)−0.0115 (10)0.0070 (10)0.0029 (9)
C10.0405 (11)0.0353 (10)0.0518 (13)−0.0014 (9)0.0023 (9)0.0071 (9)
C20.0467 (12)0.0318 (10)0.0491 (12)−0.0054 (9)−0.0020 (9)−0.0028 (9)
C30.0432 (12)0.0335 (10)0.0478 (12)−0.0031 (9)−0.0004 (9)0.0015 (9)
C70.0677 (16)0.0416 (12)0.0496 (14)−0.0128 (11)0.0028 (11)−0.0025 (10)
C60.0586 (15)0.0501 (13)0.0442 (12)0.0019 (11)0.0022 (10)0.0012 (10)
C50.0706 (17)0.0410 (12)0.0528 (14)−0.0082 (11)−0.0034 (12)−0.0077 (10)
C40.0543 (14)0.0332 (10)0.0544 (14)−0.0095 (9)−0.0020 (10)0.0008 (9)
O10.155 (3)0.0918 (17)0.0674 (15)−0.0365 (17)0.0135 (14)0.0309 (12)
O3—N21.401 (3)C2—H20.9300
O3—H30.8200C3—C41.385 (3)
O2—N11.202 (3)C3—C71.460 (3)
N1—O11.210 (3)C7—H70.9300
N1—C11.477 (3)C6—C51.385 (3)
N2—C71.264 (3)C6—H60.9300
C1—C61.371 (3)C5—C41.371 (3)
C1—C21.373 (3)C5—H50.9300
C2—C31.387 (3)C4—H40.9300
N2—O3—H3109.5C2—C3—C7118.11 (19)
O2—N1—O1123.2 (2)N2—C7—C3122.7 (2)
O2—N1—C1118.4 (2)N2—C7—H7118.7
O1—N1—C1118.4 (2)C3—C7—H7118.7
C7—N2—O3111.8 (2)C1—C6—C5117.8 (2)
C6—C1—C2123.0 (2)C1—C6—H6121.1
C6—C1—N1118.9 (2)C5—C6—H6121.1
C2—C1—N1118.1 (2)C4—C5—C6120.4 (2)
C1—C2—C3118.63 (19)C4—C5—H5119.8
C1—C2—H2120.7C6—C5—H5119.8
C3—C2—H2120.7C5—C4—C3121.0 (2)
C4—C3—C2119.1 (2)C5—C4—H4119.5
C4—C3—C7122.78 (19)C3—C4—H4119.5
O2—N1—C1—C6171.2 (2)C4—C3—C7—N2−5.0 (4)
O1—N1—C1—C6−7.8 (4)C2—C3—C7—N2175.6 (3)
O2—N1—C1—C2−8.2 (3)C2—C1—C6—C50.8 (4)
O1—N1—C1—C2172.8 (3)N1—C1—C6—C5−178.6 (2)
C6—C1—C2—C3−0.5 (3)C1—C6—C5—C4−0.2 (4)
N1—C1—C2—C3178.8 (2)C6—C5—C4—C3−0.5 (4)
C1—C2—C3—C4−0.3 (3)C2—C3—C4—C50.8 (4)
C1—C2—C3—C7179.1 (2)C7—C3—C4—C5−178.6 (2)
O3—N2—C7—C3179.1 (2)
D—H···AD—HH···AD···AD—H···A
O3—H3···N2i0.822.122.841 (3)146
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯N2i0.822.122.841 (3)146

Symmetry code: (i) .

  4 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Graph-set analysis of hydrogen-bond patterns in organic crystals.

Authors:  M C Etter; J C MacDonald; J Bernstein
Journal:  Acta Crystallogr B       Date:  1990-04-01

Review 3.  Pyridinium oximes as cholinesterase reactivators. Structure-activity relationship and efficacy in the treatment of poisoning with organophosphorus compounds.

Authors:  Milan Jokanović; Milica Prostran
Journal:  Curr Med Chem       Date:  2009       Impact factor: 4.530

Review 4.  The role of oximes in the treatment of nerve agent poisoning in civilian casualties.

Authors:  Timothy C Marrs; Paul Rice; J Allister Vale
Journal:  Toxicol Rev       Date:  2006
  4 in total
  1 in total

1.  (E)-3,5-Dimeth-oxy-benzaldehyde oxime.

Authors:  Bin Dong; Yu Zhang; Jin-Zhe Chen
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-10-02
  1 in total

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