Literature DB >> 21579165

1,3-Diphenyl-3,4-dihydro-benzo[b][1,6]naphthyridine.

Werner Seebacher, Robert Weis, Robert Saf, Ferdinand Belaj.   

Abstract

The title compound, C(24)H(18)N(2), is the first structural example containing the 3,4-dihydro-benzo[b][1,6]naphthyridine fragment. It was synthesized from 2,4,6,8-tetra-phenyl-3,7-diaza-bicyclo-[3.3.1]nonan-9-one and was crystallized from a methanol-ethanol solution over two years as a racemate. The C=N double bond [1.2868 (15) Å] is bent significantly out of the plane of the aromatic bicyclic ring system [N-C-C-C = -157.63 (12)°] and out of the plane of the phenyl ring bonded at the 1-position [N-C-C-C = 41.15 (16)°].

Entities:  

Year:  2010        PMID: 21579165      PMCID: PMC2979077          DOI: 10.1107/S1600536810013619

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the synthesis of 1,3-diphenyl-1,2,3,4-tetra­hydro­benzo[b][1,6]naphthyridine, see: Sivakumar (2000 ▶). For the synthesis of 2,4,6,8-tetra­phenyl-3,7-diaza­bicyclo­[3.3.1]nonan-9-one, see Ravindran et al. (1991 ▶). For the crystal structures of other naphthyridine derivatives, see: Sivakumar et al. (2003 ▶); Laavanya et al. (2001 ▶).

Experimental

Crystal data

C24H18N2 M = 334.40 Monoclinic, a = 10.2658 (4) Å b = 10.8583 (5) Å c = 16.1842 (7) Å β = 107.909 (2)° V = 1716.63 (13) Å3 Z = 4 Mo Kα radiation μ = 0.08 mm−1 T = 100 K 0.32 × 0.28 × 0.16 mm

Data collection

Bruker APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2000 ▶) T min = 0.885, T max = 0.988 20360 measured reflections 3365 independent reflections 3060 reflections with I > 2σ(I) R int = 0.029

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.094 S = 1.02 3365 reflections 241 parameters Only H-atom displacement parameters refined Δρmax = 0.40 e Å−3 Δρmin = −0.28 e Å−3 Data collection: APEX2 (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2000 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: modified ORTEP (Johnson, 1965 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536810013619/bt5246sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810013619/bt5246Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C24H18N2F(000) = 704
Mr = 334.40Dx = 1.294 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 9913 reflections
a = 10.2658 (4) Åθ = 2.7–26.0°
b = 10.8583 (5) ŵ = 0.08 mm1
c = 16.1842 (7) ÅT = 100 K
β = 107.909 (2)°Block, yellow
V = 1716.63 (13) Å30.32 × 0.28 × 0.16 mm
Z = 4
Bruker APEXII CCD diffractometer3365 independent reflections
Radiation source: sealed tube3060 reflections with I > 2σ(I)
graphiteRint = 0.029
φ and ω scansθmax = 26.0°, θmin = 2.3°
Absorption correction: multi-scan (SADABS; Bruker, 2000)h = −12→12
Tmin = 0.885, Tmax = 0.988k = −13→13
20360 measured reflectionsl = −19→19
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.036Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.094Only H-atom displacement parameters refined
S = 1.02w = 1/[σ2(Fo2) + (0.0446P)2 + 0.7644P] where P = (Fo2 + 2Fc2)/3
3365 reflections(Δ/σ)max < 0.001
241 parametersΔρmax = 0.40 e Å3
0 restraintsΔρmin = −0.28 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.The non-hydrogen atoms were refined with anisotropic displacement parameters without any constraints. The H atom of the tertiary C—H group was refined with an individual isotropic displacement parameter and all X—C—H angles equal at a C—H distance of 1.00 Å (AFIX 13 of SHELXL-97). The H atoms of the CH2 group were refined with common isotropic displacement parameters and idealized geometry with approximately tetrahedral angles and C—H distances of 0.99 Å (AFIX 23 of SHELXL-97). The H atoms of the phenyl rings as well as the atoma H6, H7, H8, and H9 were put at the external bisector of the C—C—C angle at a C—H distance of 0.95 Å and common isotropic displacement parameters were refined for the H atoms of the same ring (AFIX 43 of SHELXL-97). The H atom H10 was put at the external bisector of the C—C—C angle at a C—H distance of 0.95 Å but the individual isotropic displacement parameter was free to refine (AFIX 43 of SHELXL-97).
xyzUiso*/Ueq
C10.60895 (12)0.61918 (11)0.71264 (8)0.0221 (3)
N20.67352 (10)0.72215 (9)0.71977 (6)0.0183 (2)
C30.61969 (11)0.81335 (10)0.64987 (7)0.0162 (2)
H30.53640.85160.65880.016 (3)*
C40.57620 (11)0.75231 (10)0.55983 (7)0.0167 (2)
H410.53410.81450.51480.022 (2)*
H420.65760.71800.54740.022 (2)*
C410.47489 (11)0.65074 (10)0.55714 (7)0.0154 (2)
N50.37687 (9)0.62770 (8)0.48450 (6)0.0160 (2)
C510.28123 (11)0.53968 (10)0.48615 (7)0.0160 (2)
C60.17392 (11)0.51425 (11)0.40906 (7)0.0186 (2)
H60.16920.55780.35730.0233 (17)*
C70.07669 (12)0.42730 (11)0.40843 (8)0.0216 (3)
H70.00540.41090.35610.0233 (17)*
C80.08147 (12)0.36181 (11)0.48477 (8)0.0220 (3)
H80.01430.30100.48330.0233 (17)*
C90.18252 (12)0.38568 (11)0.56076 (8)0.0195 (2)
H90.18390.34290.61220.0233 (17)*
C910.28508 (11)0.47405 (10)0.56299 (7)0.0168 (2)
C100.39474 (12)0.49926 (10)0.63871 (7)0.0180 (2)
H100.40190.45640.69110.022 (3)*
C1010.49068 (11)0.58561 (10)0.63637 (7)0.0173 (2)
C110.66051 (11)0.52633 (10)0.78325 (7)0.0173 (2)
C120.67192 (11)0.40231 (11)0.76360 (7)0.0182 (2)
H120.64170.37540.70490.0262 (16)*
C130.72750 (11)0.31812 (11)0.82995 (8)0.0217 (3)
H130.73710.23410.81640.0262 (16)*
C140.76892 (12)0.35674 (12)0.91590 (8)0.0234 (3)
H140.80490.29880.96110.0262 (16)*
C150.75784 (12)0.47979 (12)0.93583 (8)0.0236 (3)
H150.78670.50620.99460.0262 (16)*
C160.70445 (12)0.56423 (11)0.86972 (8)0.0208 (3)
H160.69780.64860.88350.0262 (16)*
C210.72353 (11)0.91467 (10)0.65640 (7)0.0154 (2)
C220.68122 (12)1.03683 (11)0.64243 (7)0.0184 (2)
H220.58711.05630.63070.0257 (16)*
C230.77463 (13)1.13070 (11)0.64538 (7)0.0210 (3)
H230.74411.21360.63570.0257 (16)*
C240.91240 (12)1.10332 (11)0.66241 (7)0.0218 (3)
H240.97661.16720.66460.0257 (16)*
C250.95581 (12)0.98180 (12)0.67630 (8)0.0220 (3)
H251.05000.96260.68760.0257 (16)*
C260.86247 (12)0.88817 (11)0.67380 (7)0.0190 (2)
H260.89340.80550.68400.0257 (16)*
U11U22U33U12U13U23
C10.0239 (6)0.0193 (6)0.0199 (6)−0.0017 (5)0.0022 (5)0.0022 (5)
N20.0227 (5)0.0168 (5)0.0146 (5)−0.0015 (4)0.0046 (4)0.0017 (4)
C30.0175 (5)0.0155 (5)0.0157 (5)0.0009 (4)0.0051 (4)0.0005 (4)
C40.0197 (5)0.0160 (5)0.0139 (5)−0.0009 (4)0.0043 (4)0.0014 (4)
C410.0166 (5)0.0135 (5)0.0165 (5)0.0029 (4)0.0059 (4)−0.0005 (4)
N50.0173 (5)0.0144 (5)0.0161 (5)0.0017 (4)0.0047 (4)−0.0008 (4)
C510.0170 (5)0.0133 (5)0.0182 (5)0.0029 (4)0.0061 (4)−0.0016 (4)
C60.0196 (6)0.0181 (6)0.0176 (6)0.0033 (4)0.0050 (4)−0.0012 (4)
C70.0176 (6)0.0225 (6)0.0226 (6)0.0008 (5)0.0031 (5)−0.0061 (5)
C80.0181 (6)0.0198 (6)0.0293 (6)−0.0038 (4)0.0091 (5)−0.0038 (5)
C90.0205 (6)0.0173 (6)0.0227 (6)0.0005 (4)0.0098 (5)−0.0007 (4)
C910.0178 (5)0.0140 (5)0.0194 (6)0.0022 (4)0.0071 (4)−0.0017 (4)
C100.0218 (6)0.0159 (5)0.0169 (5)0.0014 (4)0.0067 (5)0.0015 (4)
C1010.0191 (6)0.0150 (5)0.0169 (6)0.0014 (4)0.0043 (4)0.0003 (4)
C110.0151 (5)0.0186 (6)0.0177 (5)−0.0011 (4)0.0042 (4)0.0029 (4)
C120.0164 (5)0.0204 (6)0.0192 (6)−0.0019 (4)0.0074 (4)0.0001 (4)
C130.0171 (5)0.0176 (6)0.0328 (7)0.0015 (4)0.0112 (5)0.0048 (5)
C140.0165 (6)0.0288 (7)0.0252 (6)0.0029 (5)0.0067 (5)0.0138 (5)
C150.0206 (6)0.0339 (7)0.0158 (6)−0.0013 (5)0.0046 (5)0.0035 (5)
C160.0204 (6)0.0211 (6)0.0197 (6)−0.0004 (5)0.0043 (5)−0.0008 (5)
C210.0191 (5)0.0164 (5)0.0104 (5)−0.0003 (4)0.0040 (4)−0.0005 (4)
C220.0199 (6)0.0190 (6)0.0172 (5)0.0031 (4)0.0068 (4)0.0012 (4)
C230.0318 (6)0.0141 (5)0.0180 (6)0.0006 (5)0.0091 (5)−0.0006 (4)
C240.0265 (6)0.0221 (6)0.0157 (5)−0.0096 (5)0.0051 (5)−0.0034 (5)
C250.0169 (6)0.0287 (6)0.0183 (6)−0.0010 (5)0.0024 (4)−0.0013 (5)
C260.0207 (6)0.0168 (6)0.0177 (5)0.0031 (4)0.0033 (4)0.0004 (4)
C1—N21.2868 (15)C10—C1011.3688 (16)
C1—C1011.4862 (16)C10—H100.95
C1—C111.4936 (16)C11—C161.3938 (16)
N2—C31.4769 (14)C11—C121.3969 (16)
C3—C211.5128 (15)C12—C131.3920 (16)
C3—C41.5369 (15)C12—H120.95
C3—H31.00C13—C141.3884 (18)
C4—C411.5073 (15)C13—H130.95
C4—H410.99C14—C151.3873 (19)
C4—H420.99C14—H140.95
C41—N51.3152 (14)C15—C161.3875 (17)
C41—C1011.4293 (15)C15—H150.95
N5—C511.3764 (14)C16—H160.95
C51—C61.4146 (16)C21—C221.3925 (16)
C51—C911.4233 (16)C21—C261.3962 (16)
C6—C71.3717 (17)C22—C231.3901 (17)
C6—H60.95C22—H220.95
C7—C81.4132 (17)C23—C241.3874 (17)
C7—H70.95C23—H230.95
C8—C91.3679 (17)C24—C251.3887 (18)
C8—H80.95C24—H240.95
C9—C911.4168 (16)C25—C261.3891 (17)
C9—H90.95C25—H250.95
C91—C101.4126 (16)C26—H260.95
N2—C1—C101123.67 (11)C91—C10—H10120.1
N2—C1—C11117.79 (10)C10—C101—C41118.67 (10)
C101—C1—C11118.47 (10)C10—C101—C1123.78 (10)
C1—N2—C3116.92 (9)C41—C101—C1117.52 (10)
N2—C3—C21110.15 (9)C16—C11—C12119.29 (10)
N2—C3—C4111.61 (9)C16—C11—C1119.87 (11)
C21—C3—C4111.89 (9)C12—C11—C1120.75 (10)
N2—C3—H3107.7C13—C12—C11120.04 (11)
C21—C3—H3107.7C13—C12—H12120.0
C4—C3—H3107.7C11—C12—H12120.0
C41—C4—C3109.85 (9)C14—C13—C12120.07 (11)
C41—C4—H41109.7C14—C13—H13120.0
C3—C4—H41109.7C12—C13—H13120.0
C41—C4—H42109.7C15—C14—C13120.13 (11)
C3—C4—H42109.7C15—C14—H14119.9
H41—C4—H42108.2C13—C14—H14119.9
N5—C41—C101123.53 (10)C14—C15—C16119.89 (11)
N5—C41—C4119.76 (10)C14—C15—H15120.1
C101—C41—C4116.69 (9)C16—C15—H15120.1
C41—N5—C51117.96 (9)C15—C16—C11120.55 (11)
N5—C51—C6119.02 (10)C15—C16—H16119.7
N5—C51—C91122.44 (10)C11—C16—H16119.7
C6—C51—C91118.54 (10)C22—C21—C26118.52 (10)
C7—C6—C51120.56 (11)C22—C21—C3120.23 (10)
C7—C6—H6119.7C26—C21—C3121.23 (10)
C51—C6—H6119.7C23—C22—C21121.02 (11)
C6—C7—C8120.68 (11)C23—C22—H22119.5
C6—C7—H7119.7C21—C22—H22119.5
C8—C7—H7119.7C24—C23—C22120.00 (11)
C9—C8—C7120.24 (11)C24—C23—H23120.0
C9—C8—H8119.9C22—C23—H23120.0
C7—C8—H8119.9C23—C24—C25119.51 (11)
C8—C9—C91120.22 (11)C23—C24—H24120.2
C8—C9—H9119.9C25—C24—H24120.2
C91—C9—H9119.9C24—C25—C26120.43 (11)
C10—C91—C9122.76 (11)C24—C25—H25119.8
C10—C91—C51117.49 (10)C26—C25—H25119.8
C9—C91—C51119.74 (10)C25—C26—C21120.52 (11)
C101—C10—C91119.80 (10)C25—C26—H26119.7
C101—C10—H10120.1C21—C26—H26119.7
C101—C1—N2—C33.86 (17)C4—C41—C101—C1−3.06 (15)
C11—C1—N2—C3−179.16 (10)N2—C1—C101—C10−157.63 (12)
C1—N2—C3—C21−166.72 (10)C11—C1—C101—C1025.41 (17)
C1—N2—C3—C4−41.79 (14)N2—C1—C101—C4120.27 (17)
N2—C3—C4—C4155.03 (12)C11—C1—C101—C41−156.69 (10)
C21—C3—C4—C41178.98 (9)N2—C1—C11—C1641.15 (16)
C3—C4—C41—N5146.44 (10)C101—C1—C11—C16−141.71 (11)
C3—C4—C41—C101−32.39 (13)N2—C1—C11—C12−135.55 (12)
C101—C41—N5—C512.88 (16)C101—C1—C11—C1241.59 (16)
C4—C41—N5—C51−175.87 (9)C16—C11—C12—C13−0.41 (16)
C41—N5—C51—C6179.30 (10)C1—C11—C12—C13176.31 (10)
C41—N5—C51—C910.11 (15)C11—C12—C13—C141.41 (17)
N5—C51—C6—C7−179.86 (10)C12—C13—C14—C15−1.41 (17)
C91—C51—C6—C7−0.64 (16)C13—C14—C15—C160.39 (18)
C51—C6—C7—C80.24 (17)C14—C15—C16—C110.61 (18)
C6—C7—C8—C90.89 (18)C12—C11—C16—C15−0.60 (17)
C7—C8—C9—C91−1.58 (17)C1—C11—C16—C15−177.35 (11)
C8—C9—C91—C10−177.57 (11)N2—C3—C21—C22−139.22 (10)
C8—C9—C91—C511.16 (17)C4—C3—C21—C2296.01 (12)
N5—C51—C91—C10−2.06 (16)N2—C3—C21—C2642.74 (13)
C6—C51—C91—C10178.75 (10)C4—C3—C21—C26−82.02 (12)
N5—C51—C91—C9179.14 (10)C26—C21—C22—C230.20 (16)
C6—C51—C91—C9−0.05 (16)C3—C21—C22—C23−177.89 (10)
C9—C91—C10—C101179.82 (10)C21—C22—C23—C240.03 (17)
C51—C91—C10—C1011.06 (16)C22—C23—C24—C250.09 (17)
C91—C10—C101—C411.65 (16)C23—C24—C25—C26−0.43 (17)
C91—C10—C101—C1179.53 (10)C24—C25—C26—C210.66 (17)
N5—C41—C101—C10−3.83 (17)C22—C21—C26—C25−0.54 (16)
C4—C41—C101—C10174.95 (10)C3—C21—C26—C25177.53 (10)
N5—C41—C101—C1178.16 (10)
  2 in total

1.  2-nitroso-1,3-diphenyl-1,2,3,4-tetrahydrobenzo[b][1,6]naphthyridine.

Authors:  B Sivakumar; K SethuSankar; U P Senthil Kumar; R Jeyaraman; D Velmurugan
Journal:  Acta Crystallogr C       Date:  2003-02-18       Impact factor: 1.172

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total
  3 in total

1.  2,9-Dimethyl-7-phenyl-N-(4-methyl-phen-yl)dibenzo[b,h][1,6]naphthyridin-6-amine.

Authors:  K N Vennila; M Manoj; K Prabha; K J Rajendra Prasad; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-12-11

2.  2-Chloro-7-methyl-12-phenyldibenzo[b,g][1,8]naphthyridin-11(6H)-one.

Authors:  K N Vennila; K Prabha; M Manoj; K J Rajendra Prasad; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-06-26

3.  7-(4-Meth-oxy-phen-yl)-4,9-dimethyl-N-(4-methyl-phen-yl)-5,12-diaza-tetra-phen-6-amine.

Authors:  K N Vennila; K Prabha; K J Rajendra Prasad; D Velmurugan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-03-02
  3 in total

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