Literature DB >> 21579125

Methyl 2-ethyl-4-hydr-oxy-2H-1,2-benzo-thia-zine-3-carboxyl-ate 1,1-dioxide.

Muhammad Nadeem Arshad, Muhammad Zia-Ur-Rehman, Islam Ullah Khan.   

Abstract

In the title compound, C(12)H(13)NO(5)S, the thia-zine ring adopts a half chair conformation and an intra-molecular O-H⋯O hydrogen bond generates an S(6) ring. In the crystal, the mol-ecules are linked by C-H⋯O inter-actions, leading to zigzag chains along the b axis.

Entities:  

Year:  2010        PMID: 21579125      PMCID: PMC2979064          DOI: 10.1107/S1600536810012365

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For background to the biological properties of thia­zines, see: Zia-ur-Rehman et al. (2005 ▶, 2006 ▶). For related structures, see: Arshad et al. (2009a ▶,b ▶). For graph-set notation, see: Bernstein, et al. (1995 ▶).

Experimental

Crystal data

C12H13NO5S M = 283.29 Orthorhombic, a = 7.2460 (6) Å b = 20.548 (2) Å c = 8.5710 (8) Å V = 1276.1 (2) Å3 Z = 4 Mo Kα radiation μ = 0.27 mm−1 T = 296 K 0.24 × 0.14 × 0.10 mm

Data collection

Bruker KAPPA APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2007 ▶) T min = 0.938, T max = 0.974 14253 measured reflections 3148 independent reflections 1270 reflections with I > 2σ(I) R int = 0.133

Refinement

R[F 2 > 2σ(F 2)] = 0.054 wR(F 2) = 0.102 S = 0.95 3148 reflections 176 parameters 1 restraint H-atom parameters constrained Δρmax = 0.22 e Å−3 Δρmin = −0.25 e Å−3 Absolute structure: Flack (1983 ▶), 1464 Friedel pairs Flack parameter: 0.07 (12) Data collection: APEX2 (Bruker, 2007 ▶); cell refinement: SAINT (Bruker, 2007 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 (Farrugia, 1997 ▶) and PLATON (Spek, 2009 ▶); software used to prepare material for publication: X-SEED (Barbur, 2001 ▶); WinGX (Farrugia, 1999 ▶) and PLATON. Crystal structure: contains datablocks I, New_Global_Publ_Block. DOI: 10.1107/S1600536810012365/hb5390sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810012365/hb5390Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H13NO5SF(000) = 592
Mr = 283.29Dx = 1.475 Mg m3
Orthorhombic, Pna21Mo Kα radiation, λ = 0.71073 Å
Hall symbol: P 2c -2nCell parameters from 733 reflections
a = 7.2460 (6) Åθ = 2.6–17.3°
b = 20.548 (2) ŵ = 0.27 mm1
c = 8.5710 (8) ÅT = 296 K
V = 1276.1 (2) Å3Cut needle, colourless
Z = 40.24 × 0.14 × 0.10 mm
Bruker KAPPA APEXII CCD diffractometer3148 independent reflections
Radiation source: fine-focus sealed tube1270 reflections with I > 2σ(I)
graphiteRint = 0.133
φ and ω scansθmax = 28.3°, θmin = 2.0°
Absorption correction: multi-scan (SADABS; Bruker, 2007)h = −9→9
Tmin = 0.938, Tmax = 0.974k = −26→27
14253 measured reflectionsl = −11→11
Refinement on F2Hydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.054w = 1/[σ2(Fo2) + (0.0219P)2] where P = (Fo2 + 2Fc2)/3
wR(F2) = 0.102(Δ/σ)max < 0.001
S = 0.95Δρmax = 0.22 e Å3
3148 reflectionsΔρmin = −0.25 e Å3
176 parametersExtinction correction: SHELXL, Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
1 restraintExtinction coefficient: 0.0062 (9)
Primary atom site location: structure-invariant direct methodsAbsolute structure: Flack (1983), 1464 Friedel pairs
Secondary atom site location: difference Fourier mapFlack parameter: 0.07 (12)
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.19292 (16)0.06952 (6)0.49242 (15)0.0514 (4)
O10.0578 (4)0.10023 (16)0.3936 (4)0.0648 (10)
O20.1809 (4)0.00107 (13)0.5198 (4)0.0716 (10)
O30.3931 (4)0.26033 (12)0.5272 (4)0.0532 (8)
H30.44440.27090.44580.080*
O40.5638 (4)0.23848 (15)0.2618 (4)0.0563 (10)
O50.5818 (4)0.13380 (14)0.1843 (4)0.0550 (9)
N10.3974 (4)0.08716 (17)0.4241 (4)0.0413 (9)
C10.1976 (6)0.1103 (2)0.6695 (5)0.0422 (11)
C20.1285 (6)0.0824 (2)0.8054 (6)0.0536 (14)
H20.07320.04160.80270.064*
C30.1429 (6)0.1160 (3)0.9446 (6)0.0560 (15)
H3A0.10300.09701.03700.067*
C40.2163 (6)0.1776 (2)0.9459 (5)0.0589 (15)
H40.22010.20091.03890.071*
C50.2849 (6)0.2056 (2)0.8105 (6)0.0560 (14)
H50.33410.24740.81390.067*
C60.2811 (6)0.1722 (2)0.6708 (6)0.0396 (11)
C70.3701 (5)0.1955 (2)0.5296 (6)0.0406 (11)
C80.4294 (6)0.1557 (2)0.4160 (5)0.0372 (11)
C90.5296 (6)0.1805 (3)0.2822 (5)0.0471 (12)
C100.6951 (6)0.1538 (2)0.0543 (5)0.0707 (16)
H10A0.62880.1848−0.00790.106*
H10B0.72520.1165−0.00830.106*
H10C0.80660.17330.09260.106*
C110.5572 (6)0.0441 (2)0.4634 (5)0.0548 (15)
H11A0.64780.04750.38050.066*
H11B0.5143−0.00060.46570.066*
C120.6504 (6)0.0588 (3)0.6154 (7)0.0840 (19)
H12A0.69280.10310.61520.126*
H12B0.75370.03010.62900.126*
H12C0.56460.05270.69940.126*
U11U22U33U12U13U23
S10.0554 (7)0.0474 (7)0.0516 (7)−0.0144 (7)0.0019 (9)−0.0055 (8)
O10.051 (2)0.083 (3)0.060 (2)−0.0095 (18)−0.010 (2)−0.003 (2)
O20.097 (2)0.0399 (19)0.078 (3)−0.0283 (16)0.014 (2)−0.010 (2)
O30.065 (2)0.033 (2)0.061 (3)−0.0045 (14)0.0097 (19)0.0007 (19)
O40.067 (2)0.042 (2)0.059 (2)−0.0064 (17)0.0121 (19)0.0070 (18)
O50.068 (2)0.048 (2)0.050 (2)0.0000 (17)0.0208 (19)−0.0001 (19)
N10.044 (2)0.037 (2)0.043 (2)−0.0036 (17)0.0052 (18)−0.0020 (18)
C10.038 (3)0.048 (3)0.040 (3)0.000 (2)0.000 (2)−0.006 (3)
C20.038 (3)0.056 (4)0.066 (4)−0.003 (2)0.009 (3)0.005 (3)
C30.056 (3)0.062 (4)0.050 (4)0.010 (3)0.012 (3)0.008 (3)
C40.062 (3)0.075 (4)0.039 (4)0.017 (3)0.006 (3)−0.010 (3)
C50.061 (3)0.051 (3)0.056 (4)0.002 (3)0.003 (3)−0.011 (3)
C60.039 (3)0.035 (3)0.045 (3)0.002 (2)−0.001 (3)0.000 (3)
C70.044 (3)0.033 (3)0.045 (3)−0.005 (2)−0.003 (2)−0.001 (3)
C80.040 (3)0.027 (3)0.045 (3)−0.004 (2)−0.005 (2)0.002 (2)
C90.043 (3)0.058 (3)0.040 (3)−0.003 (3)−0.006 (3)−0.001 (3)
C100.086 (4)0.065 (4)0.061 (4)−0.004 (3)0.036 (3)0.002 (3)
C110.057 (3)0.037 (3)0.070 (4)0.010 (2)0.005 (3)0.010 (3)
C120.069 (4)0.102 (5)0.081 (5)0.019 (3)−0.013 (3)0.015 (4)
S1—O21.429 (3)C4—C51.388 (6)
S1—O11.441 (3)C4—H40.9300
S1—N11.634 (3)C5—C61.381 (6)
S1—C11.734 (5)C5—H50.9300
O3—C71.343 (4)C6—C71.452 (6)
O3—H30.8200C7—C81.343 (5)
O4—C91.229 (5)C8—C91.450 (6)
O5—C91.330 (5)C10—H10A0.9600
O5—C101.444 (5)C10—H10B0.9600
N1—C81.428 (5)C10—H10C0.9600
N1—C111.495 (5)C11—C121.499 (6)
C1—C21.392 (6)C11—H11A0.9700
C1—C61.408 (5)C11—H11B0.9700
C2—C31.383 (6)C12—H12A0.9600
C2—H20.9300C12—H12B0.9600
C3—C41.372 (6)C12—H12C0.9600
C3—H3A0.9300
O2—S1—O1119.1 (2)C1—C6—C7118.8 (4)
O2—S1—N1109.44 (18)C8—C7—O3123.6 (4)
O1—S1—N1107.97 (19)C8—C7—C6123.0 (4)
O2—S1—C1109.4 (2)O3—C7—C6113.3 (4)
O1—S1—C1108.4 (2)C7—C8—N1120.9 (4)
N1—S1—C1100.9 (2)C7—C8—C9121.3 (4)
C7—O3—H3109.5N1—C8—C9117.9 (4)
C9—O5—C10116.3 (3)O4—C9—O5123.6 (4)
C8—N1—C11117.9 (3)O4—C9—C8123.7 (4)
C8—N1—S1112.5 (3)O5—C9—C8112.7 (4)
C11—N1—S1119.4 (3)O5—C10—H10A109.5
C2—C1—C6121.3 (4)O5—C10—H10B109.5
C2—C1—S1121.8 (4)H10A—C10—H10B109.5
C6—C1—S1116.9 (4)O5—C10—H10C109.5
C3—C2—C1119.3 (4)H10A—C10—H10C109.5
C3—C2—H2120.4H10B—C10—H10C109.5
C1—C2—H2120.4N1—C11—C12115.2 (4)
C4—C3—C2119.8 (5)N1—C11—H11A108.5
C4—C3—H3A120.1C12—C11—H11A108.5
C2—C3—H3A120.1N1—C11—H11B108.5
C3—C4—C5120.9 (4)C12—C11—H11B108.5
C3—C4—H4119.5H11A—C11—H11B107.5
C5—C4—H4119.5C11—C12—H12A109.5
C6—C5—C4120.8 (4)C11—C12—H12B109.5
C6—C5—H5119.6H12A—C12—H12B109.5
C4—C5—H5119.6C11—C12—H12C109.5
C5—C6—C1117.7 (4)H12A—C12—H12C109.5
C5—C6—C7123.3 (4)H12B—C12—H12C109.5
O2—S1—N1—C8−171.2 (3)S1—C1—C6—C7−4.9 (5)
O1—S1—N1—C857.8 (3)C5—C6—C7—C8153.4 (4)
C1—S1—N1—C8−55.9 (3)C1—C6—C7—C8−21.9 (6)
O2—S1—N1—C11−26.6 (4)C5—C6—C7—O3−24.2 (6)
O1—S1—N1—C11−157.6 (3)C1—C6—C7—O3160.5 (4)
C1—S1—N1—C1188.7 (3)O3—C7—C8—N1−178.8 (4)
O2—S1—C1—C2−22.5 (4)C6—C7—C8—N13.8 (6)
O1—S1—C1—C2108.9 (4)O3—C7—C8—C92.0 (6)
N1—S1—C1—C2−137.8 (4)C6—C7—C8—C9−175.4 (4)
O2—S1—C1—C6155.2 (3)C11—N1—C8—C7−105.7 (4)
O1—S1—C1—C6−73.4 (4)S1—N1—C8—C739.5 (5)
N1—S1—C1—C639.9 (4)C11—N1—C8—C973.6 (5)
C6—C1—C2—C3−0.3 (7)S1—N1—C8—C9−141.2 (3)
S1—C1—C2—C3177.3 (3)C10—O5—C9—O44.3 (7)
C1—C2—C3—C43.3 (7)C10—O5—C9—C8−175.3 (4)
C2—C3—C4—C5−3.2 (7)C7—C8—C9—O4−1.5 (7)
C3—C4—C5—C60.0 (7)N1—C8—C9—O4179.3 (4)
C4—C5—C6—C12.9 (6)C7—C8—C9—O5178.1 (4)
C4—C5—C6—C7−172.4 (4)N1—C8—C9—O5−1.1 (5)
C2—C1—C6—C5−2.8 (6)C8—N1—C11—C1257.6 (5)
S1—C1—C6—C5179.5 (3)S1—N1—C11—C12−85.1 (4)
C2—C1—C6—C7172.8 (4)
D—H···AD—HH···AD···AD—H···A
O3—H3···O40.821.922.628 (5)144
C4—H4···O4i0.932.553.395 (5)152
C10—H10B···O2ii0.962.523.320 (5)141
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O3—H3⋯O40.821.922.628 (5)144
C4—H4⋯O4i0.932.553.395 (5)152
C10—H10B⋯O2ii0.962.523.320 (5)141

Symmetry codes: (i) ; (ii) .

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