Literature DB >> 21579020

Poly[aqua-(μ-pyrazine-2-carboxyl-ato-κN,O:O)(μ-pyrazine-2-carboxyl-ato-κN,O:O')lead(II)].

Wojciech Starosta1, Janusz Leciejewicz.   

Abstract

The polymeric structure of the title compound, [Pb(C(5)H(3)N(2)O(2))(2)(H(2)O)](n), is built up from centrosymmetric [Pb(C(5)H(3)N(2)O(2))(2)(H(2)O)](2) dimers, which are bridged by ligand carboxyl-ate O atoms. The Pb(II) ion adopts an irregular PbN(2)O(5) coordination polyhedron; it is chelated by one N,O-bidentate ligand and also bonds to a water O atom. A second N,O-bidentate ligand forms the dimer bridge and another bridging O atom from a nearby dimer also bonds to the Pb(II) ion, leading to layers propagating in (100). A network of O-H⋯O hydrogen bonds operates between water O atoms (donors) and carboxyl-ate O atoms (acceptors).

Entities:  

Year:  2010        PMID: 21579020      PMCID: PMC2979184          DOI: 10.1107/S1600536810013188

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the crystal structures of divalent metal ions with pyrazine-2-carboxyl­ate and water ligands, see, for example: Alcock et al. (1996 ▶); Ptasiewicz-Bąk et al. (1995 ▶, 1998 ▶). The structures of lead(II) complexes with pyrazine-4-carboxyl­ate (Starosta & Leciejewicz, 2009 ▶) and pyrazine-3-carboxyl­ate ligands (Starosta & Leciejewicz, 2010 ▶) have also been reported.

Experimental

Crystal data

[Pb(C5H3N2O2)2(H2O)] M = 471.39 Monoclinic, a = 11.098 (2) Å b = 10.382 (2) Å c = 11.678 (2) Å β = 114.13 (3)° V = 1228.0 (4) Å3 Z = 4 Mo Kα radiation μ = 13.77 mm−1 T = 293 K 0.29 × 0.16 × 0.12 mm

Data collection

Kuma KM-4 four-circle diffractometer Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008 ▶) T min = 0.135, T max = 0.251 3579 measured reflections 3411 independent reflections 2230 reflections with I > 2σ(I) R int = 0.051 3 standard reflections every 200 reflections intensity decay: 20.2%

Refinement

R[F 2 > 2σ(F 2)] = 0.058 wR(F 2) = 0.163 S = 1.02 3411 reflections 188 parameters 5 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 6.45 e Å−3 Δρmin = −5.86 e Å−3 Data collection: KM-4 Software (Kuma, 1996 ▶); cell refinement: KM-4 Software; data reduction: DATAPROC (Kuma, 2001 ▶); program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810013188/hb5383sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810013188/hb5383Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Pb(C5H3N2O2)2(H2O)]F(000) = 872
Mr = 471.39Dx = 2.550 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 25 reflections
a = 11.098 (2) Åθ = 6–15°
b = 10.382 (2) ŵ = 13.77 mm1
c = 11.678 (2) ÅT = 293 K
β = 114.13 (3)°Blocks, colourless
V = 1228.0 (4) Å30.29 × 0.16 × 0.12 mm
Z = 4
Kuma KM-4 four-circle diffractometer2230 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.051
graphiteθmax = 30.1°, θmin = 2.0°
profile data from ω/2θ scansh = 0→14
Absorption correction: analytical (CrysAlis RED; Oxford Diffraction, 2008)k = −14→0
Tmin = 0.135, Tmax = 0.251l = −15→14
3579 measured reflections3 standard reflections every 200 reflections
3411 independent reflections intensity decay: 20.2%
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.058H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.163w = 1/[σ2(Fo2) + (0.1217P)2] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
3411 reflectionsΔρmax = 6.45 e Å3
188 parametersΔρmin = −5.86 e Å3
5 restraintsExtinction correction: SHELXTL (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.0154 (12)
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Pb10.47863 (3)0.12876 (4)0.35712 (3)0.02848 (19)
O110.3570 (7)−0.0031 (8)0.4636 (8)0.0413 (18)
C220.6620 (9)0.3784 (10)0.5171 (10)0.034 (2)
O210.4811 (9)0.2586 (8)0.5220 (8)0.0399 (18)
N210.6655 (8)0.2972 (9)0.4344 (8)0.0327 (18)
C120.1581 (9)0.1152 (9)0.3625 (10)0.0299 (19)
C130.0296 (11)0.1383 (11)0.3473 (11)0.039 (2)
H13−0.00390.09570.39800.047*
C270.5599 (12)0.3532 (11)0.5717 (12)0.040 (2)
N220.8312 (12)0.5089 (11)0.5106 (13)0.059 (3)
C260.7546 (11)0.3203 (12)0.3893 (12)0.039 (2)
H260.76160.26420.33030.047*
N110.2083 (9)0.1695 (10)0.2906 (9)0.0362 (19)
C160.1307 (12)0.2491 (12)0.2013 (12)0.045 (3)
H160.16280.28890.14810.054*
C230.7440 (13)0.4853 (12)0.5559 (14)0.050 (3)
H230.73650.54090.61510.060*
O10.4080 (11)0.3287 (10)0.2149 (9)0.056 (2)
H10.378 (11)0.402 (7)0.218 (10)0.084*
H20.385 (8)0.312 (13)0.138 (3)0.084*
O120.2045 (8)−0.0170 (9)0.5394 (8)0.0445 (19)
C170.2455 (9)0.0251 (9)0.4646 (9)0.0275 (18)
N12−0.0479 (10)0.2225 (11)0.2591 (11)0.050 (3)
C150.0023 (12)0.2730 (13)0.1871 (12)0.047 (3)
H15−0.05000.32780.12300.056*
C250.8376 (14)0.4253 (14)0.4272 (15)0.055 (3)
H250.89950.43790.39350.066*
O220.5643 (12)0.4168 (10)0.6610 (9)0.054 (2)
U11U22U33U12U13U23
Pb10.0271 (2)0.0296 (2)0.0327 (3)0.00255 (14)0.01621 (15)0.00445 (14)
O110.024 (3)0.044 (4)0.060 (5)0.005 (3)0.020 (3)0.021 (4)
C220.019 (4)0.039 (5)0.041 (5)−0.002 (4)0.010 (4)0.008 (4)
O210.045 (4)0.035 (4)0.058 (5)−0.011 (3)0.040 (4)−0.012 (3)
N210.024 (4)0.044 (5)0.038 (5)−0.005 (4)0.021 (3)−0.002 (4)
C120.018 (4)0.035 (5)0.038 (5)−0.002 (3)0.012 (3)−0.003 (4)
C130.031 (5)0.048 (7)0.041 (6)0.009 (4)0.019 (4)−0.001 (4)
C270.038 (6)0.039 (6)0.047 (6)−0.005 (4)0.020 (5)−0.001 (4)
N220.048 (6)0.050 (6)0.091 (9)−0.021 (5)0.042 (6)−0.007 (6)
C260.034 (5)0.050 (6)0.050 (6)−0.004 (5)0.032 (5)−0.003 (5)
N110.027 (4)0.043 (5)0.040 (5)0.001 (4)0.016 (4)0.009 (4)
C160.039 (7)0.046 (6)0.051 (7)0.008 (5)0.018 (6)0.021 (5)
C230.042 (6)0.040 (6)0.077 (9)−0.017 (5)0.032 (6)−0.012 (6)
O10.072 (7)0.052 (5)0.042 (5)0.009 (5)0.022 (5)0.013 (4)
O120.040 (4)0.056 (5)0.044 (4)0.002 (4)0.024 (3)0.011 (4)
C170.022 (4)0.027 (4)0.033 (5)−0.007 (3)0.011 (3)−0.003 (3)
N120.031 (5)0.064 (7)0.054 (6)0.018 (5)0.016 (5)−0.003 (5)
C150.030 (6)0.057 (8)0.045 (7)0.011 (5)0.008 (5)0.012 (5)
C250.044 (7)0.055 (8)0.081 (10)−0.015 (6)0.041 (7)0.003 (7)
O220.077 (6)0.062 (6)0.042 (5)−0.030 (5)0.043 (4)−0.017 (4)
Pb1—O212.341 (7)C13—N121.357 (15)
Pb1—O11i2.508 (7)C13—H130.9300
Pb1—O12.573 (9)C27—O221.217 (15)
Pb1—O112.572 (8)N22—C231.302 (17)
Pb1—N212.577 (9)N22—C251.328 (19)
Pb1—N112.807 (9)C26—C251.378 (18)
Pb1—O22ii2.856 (8)C26—H260.9300
O11—C171.277 (12)N11—C161.334 (14)
O11—Pb1i2.508 (7)C16—C151.388 (17)
C22—N211.295 (14)C16—H160.9300
C22—C231.389 (15)C23—H230.9300
C22—C271.532 (16)O1—H10.84 (2)
O21—C271.285 (14)O1—H20.84 (2)
N21—C261.318 (12)O12—C171.219 (12)
C12—N111.310 (13)N12—C151.295 (17)
C12—C131.385 (13)C15—H150.9300
C12—C171.513 (13)C25—H250.9300
O21—Pb1—O11i81.6 (3)C13—C12—C17120.2 (9)
O21—Pb1—O188.0 (3)N12—C13—C12120.6 (11)
O11i—Pb1—O1152.2 (3)N12—C13—H13119.7
O21—Pb1—O1175.0 (3)C12—C13—H13119.7
O11i—Pb1—O1170.5 (3)O22—C27—O21125.7 (12)
O1—Pb1—O11131.3 (3)O22—C27—C22119.1 (10)
O21—Pb1—N2165.4 (3)O21—C27—C22115.1 (10)
O11i—Pb1—N2181.6 (3)C23—N22—C25116.5 (11)
O1—Pb1—N2170.6 (3)N21—C26—C25121.9 (11)
O11—Pb1—N21134.3 (3)N21—C26—H26119.0
O21—Pb1—N1178.0 (3)C25—C26—H26119.0
O11i—Pb1—N11129.8 (3)C12—N11—C16117.4 (10)
O1—Pb1—N1172.0 (3)C12—N11—Pb1116.4 (6)
O11—Pb1—N1160.1 (3)C16—N11—Pb1125.8 (8)
N21—Pb1—N11127.6 (3)N11—C16—C15120.5 (11)
O21—Pb1—O22ii149.2 (3)N11—C16—H16119.8
O11i—Pb1—O22ii102.5 (3)C15—C16—H16119.8
O1—Pb1—O22ii74.3 (3)N22—C23—C22121.0 (13)
O11—Pb1—O22ii135.4 (3)N22—C23—H23119.5
N21—Pb1—O22ii84.8 (3)C22—C23—H23119.5
N11—Pb1—O22ii118.2 (3)Pb1—O1—H1137 (10)
C17—O11—Pb1i119.3 (6)Pb1—O1—H2113 (9)
C17—O11—Pb1125.8 (6)H1—O1—H2106 (3)
Pb1i—O11—Pb1109.5 (3)O12—C17—O11124.8 (9)
N21—C22—C23123.2 (11)O12—C17—C12118.7 (9)
N21—C22—C27116.9 (9)O11—C17—C12116.5 (8)
C23—C22—C27119.9 (11)C15—N12—C13116.5 (10)
C27—O21—Pb1126.1 (7)N12—C15—C16122.9 (11)
C22—N21—C26115.8 (10)N12—C15—H15118.5
C22—N21—Pb1116.0 (6)C16—C15—H15118.5
C26—N21—Pb1127.7 (8)N22—C25—C26121.5 (11)
N11—C12—C13121.9 (10)N22—C25—H25119.2
N11—C12—C17117.9 (8)C26—C25—H25119.2
D—H···AD—HH···AD···AD—H···A
O1—H2···O21ii0.84 (2)2.17 (5)2.837 (13)136 (7)
O1—H1···O22iii0.84 (2)2.29 (5)2.969 (15)139 (7)
O1—H1···O12ii0.84 (2)2.49 (7)3.056 (13)126 (7)
Table 1

Selected bond lengths (Å)

Pb1—O212.341 (7)
Pb1—O11i2.508 (7)
Pb1—O12.573 (9)
Pb1—O112.572 (8)
Pb1—N212.577 (9)
Pb1—N112.807 (9)
Pb1—O22ii2.856 (8)

Symmetry codes: (i) ; (ii) .

Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O1—H2⋯O21ii0.84 (2)2.17 (5)2.837 (13)136 (7)
O1—H1⋯O22iii0.84 (2)2.29 (5)2.969 (15)139 (7)
O1—H1⋯O12ii0.84 (2)2.49 (7)3.056 (13)126 (7)

Symmetry codes: (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Di-μ-aqua-bis-(μ-pyridazine-4-carboxyl-ato-κN:N')bis-[triaqua-(pyridazine-4-carboxyl-ato-κO,O')lead(II)] dihydrate.

Authors:  Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-10-03

3.  catena-Poly[lead(II)-bis-(μ(2)-pyridazine-3-carboxyl-ato-κN,O:O)].

Authors:  Wojciech Starosta; Janusz Leciejewicz
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-01-23
  3 in total

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