Literature DB >> 21578939

N-Cyclo-hexyl-3,4,5-trimethoxy-benzamide.

Aamer Saeed, Muhammad Arshad, Rasheed Ahmad Khera, Michael Bolte.   

Abstract

The 3,5-meth-oxy groups in the title compound, C(16)H(23)NO(4), are almost coplanar with the aromatic ring, whereas the 4-n class="Chemical">meth-oxy group is bent out of this plane. The three CH(3)-O-C-C torsion angles are -1.51 (18), 0.73 (19) and 75.33 (15)°. The cyclo-hexane ring adopts a chair conformation. In the crystal, mol-ecules are connected by inter-molecular N-H⋯O hydrogen bonds into chains running along the b axis.

Entities:  

Year:  2009        PMID: 21578939      PMCID: PMC2972029          DOI: 10.1107/S1600536809050284

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the biological activity of benzanilides, see: Olsson et al. (2002 ▶); Lindgren et al. (2001 ▶); Calderone et al. (2006 ▶). For the use of benzamides in organic synthesis, see: Zhichkin et al. (2007 ▶); Beccalli et al. (2005 ▶). For related structures, see: Bowes et al. (2003 ▶); Chopra & Guru Row (2008 ▶); Kashino et al. (1979 ▶); Saeed et al. (2008 ▶).

Experimental

Crystal data

C16H23NO4 M = 293.35 Monoclinic, a = 23.4539 (19) Å b = 5.2145 (6) Å c = 12.4559 (10) Å β = 92.886 (6)° V = 1521.4 (2) Å3 Z = 4 Mo Kα radiation μ = 0.09 mm−1 T = 173 K 0.37 × 0.37 × 0.33 mm

Data collection

Stoe IPDSII two-circle diffractometer Absorption correction: none 6868 measured reflections 2823 independent reflections 2360 reflections with I > 2σ(I) R int = 0.062

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.109 S = 1.05 2823 reflections 198 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.27 e Å−3 Δρmin = −0.22 e Å−3 Data collection: X-AREA (Stoe & Cie, 2001 ▶); cell refinement: X-AREA; data reduction: X-AREA; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: XP in SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: PLATON (Spek, 2009 ▶) and SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536809050284/fj2261sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809050284/fj2261Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C16H23NO4F(000) = 632
Mr = 293.35Dx = 1.281 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 6103 reflections
a = 23.4539 (19) Åθ = 3.4–26.0°
b = 5.2145 (6) ŵ = 0.09 mm1
c = 12.4559 (10) ÅT = 173 K
β = 92.886 (6)°Block, colourless
V = 1521.4 (2) Å30.37 × 0.37 × 0.33 mm
Z = 4
Stoe IPDSII two-circle diffractometer2360 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.062
graphiteθmax = 25.6°, θmin = 3.4°
ω scansh = −28→23
6868 measured reflectionsk = −5→6
2823 independent reflectionsl = −15→15
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.109w = 1/[σ2(Fo2) + (0.0651P)2 + 0.0617P] where P = (Fo2 + 2Fc2)/3
S = 1.05(Δ/σ)max < 0.001
2823 reflectionsΔρmax = 0.27 e Å3
198 parametersΔρmin = −0.22 e Å3
0 restraintsExtinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4
Primary atom site location: structure-invariant direct methodsExtinction coefficient: 0.023 (3)
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.19554 (5)0.4159 (2)0.53398 (9)0.0237 (3)
H10.2089 (8)0.579 (4)0.5241 (13)0.034 (4)*
O10.21507 (4)−0.01048 (18)0.53804 (8)0.0289 (3)
O20.42937 (4)0.00520 (19)0.45580 (7)0.0279 (3)
O30.43346 (4)0.36344 (18)0.30218 (7)0.0242 (2)
O40.34531 (4)0.66623 (18)0.25120 (7)0.0255 (2)
C10.22841 (6)0.2119 (2)0.51372 (10)0.0211 (3)
C110.28301 (5)0.2637 (2)0.45950 (9)0.0198 (3)
C120.32948 (6)0.1047 (2)0.48557 (9)0.0213 (3)
H120.3265−0.02650.53790.026*
C130.38033 (6)0.1395 (3)0.43442 (9)0.0211 (3)
C140.38357 (5)0.3267 (2)0.35373 (9)0.0202 (3)
C150.33712 (6)0.4871 (2)0.32918 (9)0.0198 (3)
C160.28646 (6)0.4586 (2)0.38262 (9)0.0201 (3)
H160.25500.56930.36710.024*
C170.42929 (6)−0.1910 (3)0.53660 (10)0.0268 (3)
H17A0.4199−0.11490.60550.040*
H17B0.4671−0.27070.54380.040*
H17C0.4008−0.32140.51570.040*
C180.44384 (6)0.1648 (3)0.22488 (11)0.0294 (3)
H18A0.4411−0.00340.25930.044*
H18B0.48210.18630.19810.044*
H18C0.41540.17670.16470.044*
C190.29830 (6)0.8303 (3)0.22110 (10)0.0258 (3)
H19A0.26590.72630.19390.039*
H19B0.30950.94890.16490.039*
H19C0.28730.92820.28390.039*
C210.14322 (6)0.3901 (3)0.59287 (11)0.0247 (3)
H210.12610.21850.57550.030*
C220.15657 (7)0.4025 (4)0.71420 (11)0.0376 (4)
H22A0.17580.56700.73230.045*
H22B0.18310.26170.73570.045*
C230.10231 (7)0.3799 (4)0.77699 (12)0.0404 (4)
H23A0.08510.20820.76490.048*
H23B0.11220.39840.85480.048*
C240.05945 (7)0.5845 (3)0.74171 (12)0.0372 (4)
H24A0.07500.75570.76120.045*
H24B0.02390.55990.78000.045*
C250.04589 (7)0.5735 (4)0.62060 (12)0.0376 (4)
H25A0.01960.71530.59940.045*
H25B0.02640.40970.60230.045*
C260.10009 (6)0.5950 (3)0.55750 (11)0.0310 (3)
H26A0.09010.57570.47970.037*
H26B0.11730.76680.56920.037*
U11U22U33U12U13U23
N10.0193 (6)0.0209 (6)0.0316 (6)−0.0013 (5)0.0099 (4)0.0005 (4)
O10.0248 (5)0.0215 (5)0.0413 (6)−0.0004 (4)0.0099 (4)0.0034 (4)
O20.0198 (5)0.0365 (6)0.0277 (5)0.0075 (4)0.0047 (4)0.0091 (4)
O30.0189 (5)0.0278 (5)0.0266 (5)−0.0017 (4)0.0083 (4)−0.0024 (4)
O40.0250 (5)0.0272 (5)0.0248 (4)0.0026 (4)0.0065 (4)0.0070 (4)
C10.0188 (6)0.0230 (6)0.0215 (6)−0.0005 (5)0.0011 (5)−0.0006 (5)
C110.0184 (6)0.0221 (6)0.0192 (5)−0.0026 (5)0.0036 (5)−0.0048 (5)
C120.0218 (7)0.0225 (6)0.0197 (6)−0.0007 (5)0.0030 (5)0.0009 (5)
C130.0175 (6)0.0248 (6)0.0210 (6)0.0015 (5)0.0007 (5)−0.0025 (5)
C140.0172 (6)0.0240 (6)0.0197 (6)−0.0025 (5)0.0039 (5)−0.0035 (5)
C150.0214 (7)0.0205 (6)0.0178 (6)−0.0012 (5)0.0024 (5)−0.0011 (4)
C160.0176 (6)0.0212 (6)0.0215 (6)0.0018 (5)0.0009 (5)−0.0017 (5)
C170.0278 (7)0.0269 (7)0.0254 (6)0.0054 (6)−0.0003 (5)0.0037 (5)
C180.0293 (8)0.0299 (7)0.0301 (7)0.0031 (6)0.0125 (6)−0.0023 (6)
C190.0287 (7)0.0255 (7)0.0233 (6)0.0040 (6)0.0007 (5)0.0033 (5)
C210.0190 (7)0.0246 (7)0.0312 (7)−0.0017 (6)0.0086 (5)−0.0003 (5)
C220.0250 (8)0.0572 (10)0.0312 (8)0.0053 (7)0.0064 (6)0.0073 (7)
C230.0338 (9)0.0543 (10)0.0342 (8)0.0028 (8)0.0124 (7)0.0066 (7)
C240.0318 (8)0.0385 (9)0.0431 (8)−0.0008 (7)0.0184 (7)−0.0058 (7)
C250.0218 (8)0.0462 (9)0.0456 (9)0.0068 (7)0.0085 (6)0.0034 (7)
C260.0238 (8)0.0352 (8)0.0346 (7)0.0050 (6)0.0073 (6)0.0057 (6)
N1—C11.3451 (17)C18—H18B0.9800
N1—C211.4670 (16)C18—H18C0.9800
N1—H10.916 (19)C19—H19A0.9800
O1—C11.2424 (16)C19—H19B0.9800
O2—C131.3615 (16)C19—H19C0.9800
O2—C171.4353 (16)C21—C261.521 (2)
O3—C141.3761 (15)C21—C221.529 (2)
O3—C181.4432 (16)C21—H211.0000
O4—C151.3681 (15)C22—C231.532 (2)
O4—C191.4307 (17)C22—H22A0.9900
C1—C111.5020 (17)C22—H22B0.9900
C11—C121.3945 (19)C23—C241.516 (2)
C11—C161.4015 (18)C23—H23A0.9900
C12—C131.3920 (18)C23—H23B0.9900
C12—H120.9500C24—C251.527 (2)
C13—C141.4058 (18)C24—H24A0.9900
C14—C151.3951 (19)C24—H24B0.9900
C15—C161.3988 (18)C25—C261.5320 (19)
C16—H160.9500C25—H25A0.9900
C17—H17A0.9800C25—H25B0.9900
C17—H17B0.9800C26—H26A0.9900
C17—H17C0.9800C26—H26B0.9900
C18—H18A0.9800
C1—N1—C21121.53 (11)H19A—C19—H19B109.5
C1—N1—H1120.3 (11)O4—C19—H19C109.5
C21—N1—H1117.0 (11)H19A—C19—H19C109.5
C13—O2—C17118.23 (10)H19B—C19—H19C109.5
C14—O3—C18112.80 (10)N1—C21—C26110.57 (11)
C15—O4—C19117.42 (10)N1—C21—C22110.82 (11)
O1—C1—N1122.58 (12)C26—C21—C22110.89 (12)
O1—C1—C11120.55 (12)N1—C21—H21108.1
N1—C1—C11116.87 (11)C26—C21—H21108.1
C12—C11—C16121.26 (11)C22—C21—H21108.2
C12—C11—C1117.54 (11)C21—C22—C23111.55 (13)
C16—C11—C1121.16 (11)C21—C22—H22A109.3
C13—C12—C11119.56 (11)C23—C22—H22A109.3
C13—C12—H12120.2C21—C22—H22B109.3
C11—C12—H12120.2C23—C22—H22B109.3
O2—C13—C12125.32 (11)H22A—C22—H22B108.0
O2—C13—C14114.92 (11)C24—C23—C22110.72 (13)
C12—C13—C14119.75 (12)C24—C23—H23A109.5
O3—C14—C15119.15 (11)C22—C23—H23A109.5
O3—C14—C13120.54 (12)C24—C23—H23B109.5
C15—C14—C13120.22 (11)C22—C23—H23B109.5
O4—C15—C14115.40 (11)H23A—C23—H23B108.1
O4—C15—C16124.30 (12)C23—C24—C25111.23 (13)
C14—C15—C16120.29 (11)C23—C24—H24A109.4
C15—C16—C11118.82 (12)C25—C24—H24A109.4
C15—C16—H16120.6C23—C24—H24B109.4
C11—C16—H16120.6C25—C24—H24B109.4
O2—C17—H17A109.5H24A—C24—H24B108.0
O2—C17—H17B109.5C24—C25—C26111.54 (13)
H17A—C17—H17B109.5C24—C25—H25A109.3
O2—C17—H17C109.5C26—C25—H25A109.3
H17A—C17—H17C109.5C24—C25—H25B109.3
H17B—C17—H17C109.5C26—C25—H25B109.3
O3—C18—H18A109.5H25A—C25—H25B108.0
O3—C18—H18B109.5C21—C26—C25110.91 (12)
H18A—C18—H18B109.5C21—C26—H26A109.5
O3—C18—H18C109.5C25—C26—H26A109.5
H18A—C18—H18C109.5C21—C26—H26B109.5
H18B—C18—H18C109.5C25—C26—H26B109.5
O4—C19—H19A109.5H26A—C26—H26B108.0
O4—C19—H19B109.5
C21—N1—C1—O14.06 (19)C19—O4—C15—C16−1.51 (18)
C21—N1—C1—C11−175.93 (11)O3—C14—C15—O42.05 (17)
O1—C1—C11—C12−32.62 (17)C13—C14—C15—O4178.53 (11)
N1—C1—C11—C12147.36 (12)O3—C14—C15—C16−178.18 (11)
O1—C1—C11—C16145.07 (13)C13—C14—C15—C16−1.70 (18)
N1—C1—C11—C16−34.94 (17)O4—C15—C16—C11178.64 (11)
C16—C11—C12—C13−0.02 (18)C14—C15—C16—C11−1.11 (18)
C1—C11—C12—C13177.67 (11)C12—C11—C16—C151.99 (18)
C17—O2—C13—C120.73 (19)C1—C11—C16—C15−175.62 (11)
C17—O2—C13—C14−179.46 (11)C1—N1—C21—C26−150.78 (12)
C11—C12—C13—O2177.00 (12)C1—N1—C21—C2285.85 (16)
C11—C12—C13—C14−2.81 (19)N1—C21—C22—C23179.14 (13)
C18—O3—C14—C15−108.20 (13)C26—C21—C22—C2355.95 (18)
C18—O3—C14—C1375.33 (15)C21—C22—C23—C24−56.00 (19)
O2—C13—C14—O30.29 (17)C22—C23—C24—C2555.59 (19)
C12—C13—C14—O3−179.89 (11)C23—C24—C25—C26−55.74 (19)
O2—C13—C14—C15−176.15 (11)N1—C21—C26—C25−178.60 (12)
C12—C13—C14—C153.68 (19)C22—C21—C26—C25−55.27 (17)
C19—O4—C15—C14178.25 (11)C24—C25—C26—C2155.42 (18)
D—H···AD—HH···AD···AD—H···A
N1—H1···O1i0.916 (19)2.153 (19)3.0262 (15)159.0 (15)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1⋯O1i 0.916 (19)2.153 (19)3.0262 (15)159.0 (15)

Symmetry code: (i) .

  8 in total

1.  Heterocyclic analogs of benzanilide derivatives as potassium channel activators. IX.

Authors:  Vincenzo Calderone; Francesca Lidia Fiamingo; Irene Giorgi; Michele Leonardi; Oreste Livi; Alma Martelli; Enrica Martinotti
Journal:  Eur J Med Chem       Date:  2006-04-19       Impact factor: 6.514

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  N-substituted benzamides inhibit nuclear factor-kappaB and nuclear factor of activated T cells activity while inducing activator protein 1 activity in T lymphocytes.

Authors:  H Lindgren; R W Pero; F Ivars; T Leanderson
Journal:  Mol Immunol       Date:  2001-08       Impact factor: 4.407

4.  2,4-Dichloro-N-cyclo-hexyl-benzamide.

Authors:  Aamer Saeed; Naeem Abbas; Shahid Hussain; Ulrich Flörke
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-04-02

5.  A triclinic polymorph of benzanilide: disordered molecules form hydrogen-bonded chains.

Authors:  Katharine F Bowes; Christopher Glidewell; John N Low; Janet M S Skakle; James L Wardell
Journal:  Acta Crystallogr C       Date:  2002-12-10       Impact factor: 1.172

6.  A novel highly stereoselective synthesis of 2,3-disubstituted 3H-quinazoline-4-one derivatives.

Authors:  Paul Zhichkin; Edward Kesicki; Jennifer Treiberg; Lisa Bourdon; Matthew Ronsheim; Hua Chee Ooi; Stephen White; Angela Judkins; David Fairfax
Journal:  Org Lett       Date:  2007-03-10       Impact factor: 6.005

7.  Mechanism of action for N-substituted benzamide-induced apoptosis.

Authors:  A R Olsson; H Lindgren; R W Pero; T Leanderson
Journal:  Br J Cancer       Date:  2002-03-18       Impact factor: 7.640

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  8 in total

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