Literature DB >> 21578927

4,4'-(Ethene-1,2-diyl)dipyridinium bis-[4-(2-carboxy-benzo-yl)benzoate].

Cai Li, Dong-Sheng Li, Jun Zhao, Xue-Gang Zheng, Xi-Jun Ke.   

Abstract

In the crystal structure of the title compound, C(12)H(12)N(2) (2+)·2C(15)H(9)O(5) (-), the cation has site symmetry with the mid-point of C=C bond located on an inversion center. The two benzene rings of the anion are oriented at a dihedral angle 85.87 (6)°. In the crystal, inter-molecular O-H⋯O and N-H⋯O hydrogen bonds link the cations and anions into supra-molecular double chains, which are further connected into a three-dimensional network through inter-molecular C-H⋯O and π-π stacking between parallel pyridine rings [centroid-centroid distance = 3.4413 (12)Å] and between parallel benzene rings [centroid-centroid distance = 3.6116 (14)Å].

Entities:  

Year:  2009        PMID: 21578927      PMCID: PMC2971962          DOI: 10.1107/S1600536809048417

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For hydrogen bonding and π–π stacking in supra­molecular systems, see: Desiraju (2000 ▶); Ma et al. (2006 ▶); Dong et al. (2008 ▶); Huang & Qian (2005 ▶).

Experimental

Crystal data

C12H12N2 2+·2C15H9O5 − M = 722.68 Triclinic, a = 7.1335 (13) Å b = 9.4558 (17) Å c = 13.206 (2) Å α = 81.641 (2)° β = 79.986 (2)° γ = 71.260 (2)° V = 826.9 (3) Å3 Z = 1 Mo Kα radiation μ = 0.11 mm−1 T = 293 K 0.29 × 0.14 × 0.06 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.983, T max = 0.994 6357 measured reflections 3055 independent reflections 2212 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.115 S = 1.01 3055 reflections 250 parameters 2 restraints H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.20 e Å−3 Δρmin = −0.22 e Å−3 Data collection: SMART (Bruker, 1997 ▶); cell refinement: SAINT (Bruker, 1997 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536809048417/xu2637sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536809048417/xu2637Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H12N22+·2C15H9O5Z = 1
Mr = 722.68F(000) = 376
Triclinic, P1Dx = 1.451 Mg m3
Hall symbol: -P 1Mo Kα radiation, λ = 0.71073 Å
a = 7.1335 (13) ÅCell parameters from 6357 reflections
b = 9.4558 (17) Åθ = 2.7–25.5°
c = 13.206 (2) ŵ = 0.11 mm1
α = 81.641 (2)°T = 293 K
β = 79.986 (2)°Prism, colorless
γ = 71.260 (2)°0.29 × 0.14 × 0.06 mm
V = 826.9 (3) Å3
Bruker SMART CCD diffractometer3055 independent reflections
Radiation source: fine-focus sealed tube2212 reflections with I > 2σ(I)
graphiteRint = 0.025
φ and ω scansθmax = 25.5°, θmin = 2.7°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −8→8
Tmin = 0.983, Tmax = 0.994k = −11→11
6357 measured reflectionsl = −15→15
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.043Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.115H atoms treated by a mixture of independent and constrained refinement
S = 1.01w = 1/[σ2(Fo2) + (0.0527P)2 + 0.1979P] where P = (Fo2 + 2Fc2)/3
3055 reflections(Δ/σ)max < 0.001
250 parametersΔρmax = 0.20 e Å3
2 restraintsΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.3708 (3)0.7481 (2)1.06116 (15)0.0344 (5)
H10.39410.79671.11180.041*
C20.2259 (3)0.6772 (2)1.08332 (15)0.0336 (5)
H20.15390.67651.14920.040*
C30.1860 (3)0.6061 (2)1.00748 (14)0.0304 (4)
C40.3013 (3)0.6087 (2)0.91086 (15)0.0340 (5)
H40.28030.56250.85810.041*
C50.4460 (3)0.6796 (2)0.89372 (15)0.0344 (5)
H5A0.52290.67990.82920.041*
C60.0296 (3)0.5327 (2)1.03236 (15)0.0349 (5)
H6−0.03400.53201.10010.042*
C7−0.1807 (3)−0.1223 (2)0.82078 (16)0.0358 (5)
C8−0.0337 (3)−0.0357 (2)0.78080 (15)0.0312 (4)
C90.0829 (3)−0.0123 (2)0.84717 (15)0.0347 (5)
H90.0702−0.05050.91610.042*
C100.2171 (3)0.0670 (2)0.81169 (15)0.0346 (5)
H100.29760.07870.85620.042*
C110.2329 (3)0.1293 (2)0.70999 (15)0.0308 (4)
C120.1136 (3)0.1081 (2)0.64353 (15)0.0348 (5)
H120.12100.15080.57550.042*
C13−0.0158 (3)0.0235 (2)0.67888 (16)0.0372 (5)
H13−0.09100.00660.63360.045*
C140.3742 (3)0.2184 (2)0.67376 (15)0.0344 (5)
C150.3715 (3)0.3001 (2)0.56687 (14)0.0308 (4)
C160.4987 (3)0.2238 (2)0.48697 (16)0.0392 (5)
H160.57560.12470.50040.047*
C170.5124 (3)0.2935 (2)0.38745 (16)0.0407 (5)
H170.59660.24090.33430.049*
C180.4011 (3)0.4412 (2)0.36712 (15)0.0388 (5)
H180.41150.48850.30040.047*
C190.2744 (3)0.5186 (2)0.44582 (14)0.0333 (5)
H190.20000.61810.43180.040*
C200.2565 (3)0.4497 (2)0.54578 (14)0.0306 (4)
C210.1207 (3)0.5313 (2)0.63185 (16)0.0351 (5)
N10.4789 (2)0.74805 (18)0.96750 (13)0.0323 (4)
H1A0.575 (2)0.797 (2)0.9512 (16)0.048*
O1−0.2576 (2)−0.11219 (16)0.91455 (11)0.0438 (4)
O2−0.2190 (2)−0.19672 (18)0.76131 (12)0.0511 (4)
O30.5013 (2)0.21679 (19)0.72479 (12)0.0567 (5)
O40.1007 (3)0.47083 (18)0.71866 (11)0.0581 (5)
O50.0256 (2)0.67303 (16)0.60536 (11)0.0434 (4)
H5−0.053 (3)0.715 (3)0.6618 (13)0.065*
U11U22U33U12U13U23
C10.0388 (11)0.0335 (11)0.0339 (11)−0.0137 (9)−0.0039 (9)−0.0075 (9)
C20.0361 (11)0.0372 (11)0.0282 (11)−0.0141 (9)0.0014 (8)−0.0052 (9)
C30.0339 (11)0.0290 (10)0.0304 (11)−0.0128 (8)−0.0044 (8)−0.0019 (8)
C40.0387 (11)0.0370 (11)0.0306 (11)−0.0172 (9)−0.0019 (9)−0.0069 (9)
C50.0389 (11)0.0386 (11)0.0276 (11)−0.0166 (9)0.0011 (9)−0.0045 (9)
C60.0382 (11)0.0430 (12)0.0274 (11)−0.0212 (9)0.0008 (8)−0.0017 (9)
C70.0335 (11)0.0321 (11)0.0429 (13)−0.0137 (9)0.0023 (9)−0.0080 (9)
C80.0278 (10)0.0265 (10)0.0377 (11)−0.0080 (8)0.0014 (8)−0.0059 (8)
C90.0391 (11)0.0334 (11)0.0302 (11)−0.0133 (9)−0.0009 (9)0.0017 (9)
C100.0362 (11)0.0371 (11)0.0328 (11)−0.0134 (9)−0.0081 (9)−0.0014 (9)
C110.0311 (10)0.0290 (10)0.0324 (11)−0.0108 (8)−0.0033 (8)−0.0005 (8)
C120.0380 (11)0.0372 (11)0.0312 (11)−0.0158 (9)−0.0046 (9)−0.0002 (9)
C130.0370 (11)0.0426 (12)0.0367 (12)−0.0172 (10)−0.0068 (9)−0.0047 (9)
C140.0370 (11)0.0361 (11)0.0334 (11)−0.0157 (9)−0.0055 (9)−0.0021 (9)
C150.0334 (10)0.0349 (11)0.0300 (11)−0.0193 (9)−0.0035 (8)−0.0024 (8)
C160.0413 (12)0.0354 (11)0.0429 (13)−0.0138 (10)−0.0047 (10)−0.0064 (10)
C170.0422 (12)0.0490 (13)0.0324 (12)−0.0173 (10)0.0045 (9)−0.0120 (10)
C180.0471 (12)0.0481 (13)0.0261 (11)−0.0237 (11)−0.0008 (9)−0.0024 (9)
C190.0371 (11)0.0365 (11)0.0306 (11)−0.0181 (9)−0.0029 (9)−0.0027 (9)
C200.0303 (10)0.0372 (11)0.0298 (10)−0.0179 (9)−0.0019 (8)−0.0051 (8)
C210.0390 (11)0.0384 (12)0.0344 (12)−0.0208 (10)−0.0029 (9)−0.0059 (9)
N10.0332 (9)0.0313 (9)0.0361 (9)−0.0170 (7)−0.0019 (7)−0.0020 (7)
O10.0517 (9)0.0507 (9)0.0365 (8)−0.0315 (8)0.0090 (7)−0.0094 (7)
O20.0518 (10)0.0595 (10)0.0518 (10)−0.0337 (8)0.0162 (7)−0.0255 (8)
O30.0625 (11)0.0779 (12)0.0471 (10)−0.0449 (10)−0.0238 (8)0.0134 (8)
O40.0851 (13)0.0520 (10)0.0288 (9)−0.0186 (9)0.0082 (8)−0.0017 (7)
O50.0459 (9)0.0397 (9)0.0406 (9)−0.0121 (7)0.0067 (7)−0.0084 (7)
C1—N11.339 (2)C11—C121.398 (3)
C1—C21.374 (3)C11—C141.488 (3)
C1—H10.9300C12—C131.388 (3)
C2—C31.398 (3)C12—H120.9300
C2—H20.9300C13—H130.9300
C3—C41.394 (3)C14—O31.215 (2)
C3—C61.462 (3)C14—C151.508 (3)
C4—C51.373 (3)C15—C161.387 (3)
C4—H40.9300C15—C201.404 (3)
C5—N11.336 (2)C16—C171.384 (3)
C5—H5A0.9300C16—H160.9300
C6—C6i1.318 (4)C17—C181.380 (3)
C6—H60.9300C17—H170.9300
C7—O21.244 (2)C18—C191.379 (3)
C7—O11.268 (2)C18—H180.9300
C7—C81.511 (3)C19—C201.388 (3)
C8—C131.381 (3)C19—H190.9300
C8—C91.392 (3)C20—C211.489 (3)
C9—C101.379 (3)C21—O41.211 (2)
C9—H90.9300C21—O51.320 (2)
C10—C111.387 (3)N1—H1A0.924 (17)
C10—H100.9300O5—H50.91 (2)
N1—C1—C2120.83 (18)C13—C12—H12119.9
N1—C1—H1119.6C11—C12—H12119.9
C2—C1—H1119.6C8—C13—C12120.46 (19)
C1—C2—C3120.38 (18)C8—C13—H13119.8
C1—C2—H2119.8C12—C13—H13119.8
C3—C2—H2119.8O3—C14—C11121.52 (18)
C4—C3—C2117.10 (17)O3—C14—C15119.46 (17)
C4—C3—C6123.40 (17)C11—C14—C15118.76 (17)
C2—C3—C6119.50 (17)C16—C15—C20119.20 (18)
C5—C4—C3119.87 (18)C16—C15—C14117.15 (18)
C5—C4—H4120.1C20—C15—C14123.56 (17)
C3—C4—H4120.1C17—C16—C15120.7 (2)
N1—C5—C4121.57 (18)C17—C16—H16119.7
N1—C5—H5A119.2C15—C16—H16119.7
C4—C5—H5A119.2C18—C17—C16120.02 (19)
C6i—C6—C3126.0 (2)C18—C17—H17120.0
C6i—C6—H6117.0C16—C17—H17120.0
C3—C6—H6117.0C19—C18—C17119.91 (19)
O2—C7—O1124.59 (18)C19—C18—H18120.0
O2—C7—C8119.16 (18)C17—C18—H18120.0
O1—C7—C8116.25 (18)C18—C19—C20120.85 (19)
C13—C8—C9119.21 (18)C18—C19—H19119.6
C13—C8—C7120.68 (18)C20—C19—H19119.6
C9—C8—C7120.10 (18)C19—C20—C15119.32 (18)
C10—C9—C8120.65 (18)C19—C20—C21121.69 (18)
C10—C9—H9119.7C15—C20—C21118.99 (17)
C8—C9—H9119.7O4—C21—O5123.48 (19)
C9—C10—C11120.41 (19)O4—C21—C20122.0 (2)
C9—C10—H10119.8O5—C21—C20114.51 (17)
C11—C10—H10119.8C5—N1—C1120.23 (17)
C10—C11—C12119.07 (17)C5—N1—H1A118.1 (14)
C10—C11—C14119.72 (17)C1—N1—H1A121.6 (14)
C12—C11—C14121.21 (17)C21—O5—H5109.1 (16)
C13—C12—C11120.14 (18)
N1—C1—C2—C3−1.3 (3)C10—C11—C14—C15−172.89 (18)
C1—C2—C3—C41.1 (3)C12—C11—C14—C156.5 (3)
C1—C2—C3—C6−179.33 (18)O3—C14—C15—C1683.1 (3)
C2—C3—C4—C5−0.2 (3)C11—C14—C15—C16−91.1 (2)
C6—C3—C4—C5−179.75 (19)O3—C14—C15—C20−93.4 (2)
C3—C4—C5—N1−0.6 (3)C11—C14—C15—C2092.4 (2)
C4—C3—C6—C6i−3.6 (4)C20—C15—C16—C17−0.1 (3)
C2—C3—C6—C6i176.9 (3)C14—C15—C16—C17−176.80 (18)
O2—C7—C8—C1331.7 (3)C15—C16—C17—C181.0 (3)
O1—C7—C8—C13−147.9 (2)C16—C17—C18—C19−0.8 (3)
O2—C7—C8—C9−149.50 (19)C17—C18—C19—C20−0.2 (3)
O1—C7—C8—C930.9 (3)C18—C19—C20—C151.0 (3)
C13—C8—C9—C10−1.0 (3)C18—C19—C20—C21179.95 (18)
C7—C8—C9—C10−179.80 (18)C16—C15—C20—C19−0.8 (3)
C8—C9—C10—C112.3 (3)C14—C15—C20—C19175.59 (17)
C9—C10—C11—C12−1.2 (3)C16—C15—C20—C21−179.81 (17)
C9—C10—C11—C14178.19 (18)C14—C15—C20—C21−3.4 (3)
C10—C11—C12—C13−1.1 (3)C19—C20—C21—O4178.18 (19)
C14—C11—C12—C13179.44 (18)C15—C20—C21—O4−2.9 (3)
C9—C8—C13—C12−1.4 (3)C19—C20—C21—O5−1.8 (3)
C7—C8—C13—C12177.40 (18)C15—C20—C21—O5177.15 (16)
C11—C12—C13—C82.5 (3)C4—C5—N1—C10.4 (3)
C10—C11—C14—O313.1 (3)C2—C1—N1—C50.5 (3)
C12—C11—C14—O3−167.5 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···O1ii0.92 (2)1.65 (2)2.577 (2)176 (2)
O5—H5···O2iii0.91 (2)1.72 (2)2.629 (2)175 (2)
C1—H1···O3iv0.932.383.209 (3)149
C5—H5A···O2ii0.932.463.144 (3)130
C6—H6···O4i0.932.363.256 (2)163
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯A D—HH⋯A DA D—H⋯A
N1—H1A⋯O1i 0.924 (17)1.654 (17)2.577 (2)176 (2)
O5—H5⋯O2ii 0.91 (2)1.72 (2)2.629 (2)175 (2)
C1—H1⋯O3iii 0.932.383.209 (3)149
C5—H5A⋯O2i 0.932.463.144 (3)130
C6—H6⋯O4iv 0.932.363.256 (2)163

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  1,3-Di-4-pyridylpropane-4,4'-oxy-dibenzoic acid (1/1).

Authors:  Wen-Wen Dong; Dong-Sheng Li; Jun Zhao; Long Tang; Xiang-Yang Hou
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-11-08
  2 in total

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